COPASI API
4.40.278
Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level
1
2
3
]
►
N
copasi
Namespace can be controlled using the cxx_namespace variable
C
autoexcept
C
COptionParser
C
option_error
C
option_locations
C
options
C
AdditionalGraphicalObjectHandler
C
alist
C
AssignmentHandler
C
Bar
C
BarColor
C
BoundingBoxHandler
►
C
CAbstractLayoutInterface
C
VariableDescription
C
CallParameterHandler
C
CAnalyticsMethod
C
CAnalyticsProblem
C
CAnalyticsTask
C
CAnnotation
C
CArray
C
CArrayElementReference
C
CArrayInterface
C
CBaseUnit
C
CBiologicalDescription
C
CBitPatternMethod
C
CBitPatternTree
C
CBitPatternTreeMethod
C
CBitPatternTreeNode
►
C
CBrent
C
Eval
C
EvalTemplate
C
CCallback
C
CCallbackInterface
►
C
CCallParameters
C
UType
C
CCellDesignerImporter
C
CCheckForUpdates
C
CChemEq
C
CChemEqElement
C
CChemEqInterface
C
CChemEqParser
►
C
CChemEqParserBase
C
Data
C
CCommonName
C
CCompartment
►
C
CCompressedColumnFormat
C
const_row_iterator
►
C
CConfigurationFile
C
CXML
C
CContext
C
CCopasiException
C
CCopasiMessage
C
CCopasiMethod
C
CCopasiNode
C
CCopasiParameter
C
CCopasiParameterGroup
C
CCopasiProblem
C
CCopasiReportSeparator
►
C
CCopasiSpringLayout
C
CoordinateRelation
C
Parameters
C
UpdateAction
This describes one update action that has to be performed during
setState()
►
C
CCopasiTask
C
CDescription
C
CResult
C
CCopasiTaskStatus
C
CCopasiTimer
C
CCopasiTimeVariable
►
C
CCopasiTree
C
const_iterator
C
iterator
C
CCopasiXML
►
C
CCopasiXMLInterface
C
DBL
C
CCore
C
CCreator
C
CCrossSectionMethod
C
CCrossSectionProblem
C
CCrossSectionTask
C
CCrossValidationSet
C
CCSPMethod
Implements the CSP method
C
CData
C
CDataArray
C
CDataContainer
C
CDataHandler
C
CDataMatrixReference
►
C
CDataModel
C
CContent
C
CDataObject
►
C
CDataObjectMap
C
const_iterator
C
const_type_iterator
C
iterator
C
type_iterator
C
CDataObjectReference
C
CDataString
C
CDataValue
►
C
CDataVector
C
const_iterator
C
iterator
C
CDataVectorN
C
CDataVectorNS
C
CDataVectorReference
C
CDataVectorS
C
CDefaultOutputDescription
C
CDependencyGraph
C
CDependencyGraphNode
C
CDependentNumberReference
C
CDerive
C
CDirEntry
►
C
CEFMAlgorithm
C
CSpeciesOrderNode
C
CEFMMethod
C
CEFMProblem
C
CEFMTask
C
CEigen
C
CellDesignerSpecies
C
CEnumAnnotation
C
CEvaluationLexer
►
C
CEvaluationNode
C
CPrecedence
C
CEvaluationNodeCall
C
CEvaluationNodeChoice
C
CEvaluationNodeConstant
C
CEvaluationNodeDelay
C
CEvaluationNodeFunction
C
CEvaluationNodeLogical
C
CEvaluationNodeNumber
C
CEvaluationNodeObject
C
CEvaluationNodeOperator
C
CEvaluationNodeStructure
C
CEvaluationNodeUnit
C
CEvaluationNodeVariable
C
CEvaluationNodeVector
C
CEvaluationNodeWhiteSpace
C
CEvaluationParserBase
C
CEvaluationTree
C
CEvent
C
CEventAssignment
C
CExpat
C
CExpatTemplate
C
CExperiment
►
C
CExperimentFileInfo
C
CExperimentInfo
►
C
CExperimentObjectMap
C
CDataColumn
C
CExperimentSet
C
CExpression
►
C
CExpressionGenerator
C
sOperation
C
CFitConstraint
C
CFitItem
C
CFitProblem
C
CFitTask
C
CFittingPoint
C
CFixLocalReactionParameters
C
CFlags
C
CFluxMode
C
CFluxScore
C
CFortranAccess
C
CFunction
The class for handling a chemical kinetic function
►
C
CFunctionAnalyzer
C
CValue
►
C
Result
C
FunctionInformation
C
CFunctionDB
C
CFunctionParameter
C
CFunctionParameterMap
C
CFunctionParameters
C
ChannelSpecHandler
C
CharacterDataHandler
C
CheckPoint
C
CHybridBalance
C
CHybridMethod
►
C
CHybridMethodODE45
C
Data
►
C
CHybridNextReactionLSODAMethod
C
LSODA
C
CHybridNextReactionRKMethod
C
CHybridStochFlag
C
CILDMMethod
Implements the ILDM method
C
CILDMModifiedMethod
Implementes the modified ILDM method
C
cilist
C
CIndexedPriorityQueue
C
CInfo
►
C
CInternalSolver
C
State
C
CIssue
C
CJitCompiler
C
CJitCompilerImplementation
C
CJitExpression
►
C
CKeyFactory
C
CDecisionVector
C
HashTable
C
CKinFunction
C
CLayout
►
C
CLayoutEngine
C
Data
C
CLayoutInitializer
C
CLayoutState
C
CLBase
C
CLBoundingBox
C
CLColorDefinition
C
CLCompartmentGlyph
C
CLCurve
C
CLDimensions
►
C
CLeastSquareSolution
C
ResultInfo
C
CLEllipse
C
CLFontRendererBase
C
CLFontSpec
C
CLGeneralGlyph
C
CLGlobalRenderInformation
C
CLGlobalStyle
C
CLGlyphWithCurve
C
CLGradientBase
C
CLGradientStop
C
CLGradientStops
C
CLGraphicalObject
C
CLGraphicalPrimitive1D
C
CLGraphicalPrimitive2D
C
CLGroup
C
CLGroupAttributes
C
CLImage
C
CLImageTexturizer
C
CLinkMatrix
C
CLinkMatrixView
C
CListOfLayouts
C
CLLayoutRenderer
C
CLLinearGradient
C
CLLineEnding
C
CLLineSegment
C
CLLineStippleTexture
C
cllist
C
CLLocalRenderInformation
C
CLLocalStyle
C
CLMetabGlyph
C
CLMetabReferenceGlyph
C
CLNAMethod
C
CLNAProblem
C
CLNATask
C
CLocaleString
C
CLowerTriangularView
C
CLPoint
C
CLPolygon
C
CLRadialGradient
C
CLReactionGlyph
C
CLRectangle
C
CLReferenceGlyph
C
CLRelAbsVector
C
CLRenderCubicBezier
C
CLRenderCurve
C
CLRenderFlattener
C
CLRenderInformationBase
C
CLRenderPoint
C
CLRenderResolver
C
CLRGBAColor
C
CLSimpleImageTexturizer
C
CLSODA
►
C
CLsodaMethod
C
Data
C
State
►
C
CLsodaMethod2
C
Data
C
State
C
CLSODAR
C
CLStyle
C
CLText
C
CLTextGlyph
C
CLTextTextureSpec
C
CLTextureSpec
C
CLTransformation
C
CLTransformation2D
C
CLUnresolvedReferenceException
C
CLyapMethod
C
CLyapProblem
C
CLyapTask
C
CLyapValidSubTypes
►
C
CLyapWolfMethod
C
Data
C
CMassAction
►
C
CMath
C
Entity
C
sPointers
C
sRelocate
C
Variables
►
C
CMathContainer
C
sDiscontinuous
C
sSize
C
CMathContext
C
CMathDelay
C
CMathDependencyGraph
C
CMathDependencyNode
►
C
CMathDependencyNodeIterator
C
CStackElement
C
CMathDerive
►
C
CMathEvent
C
CAssignment
►
C
CTrigger
C
CRootProcessor
►
C
CMathEventQueue
C
CAction
C
CKey
C
CMathExpression
C
CMathHistory
C
CMathHistoryCore
C
CMathMl
C
CMathMLToTeX
C
CMathObject
C
CMathReaction
C
CMathUpdateSequence
C
CMatrix
C
CMatrixInterface
C
CMCAMethod
C
CMCAProblem
C
CMCATask
C
Cmd5
C
CMetab
C
CMetabNameInterface
C
CMetabOld
C
CMethodFactory
C
CMIRIAMInfo
C
CMIRIAMResource
C
CMIRIAMResourceObject
C
CMIRIAMResources
C
CMMLOutput
C
CModel
C
CModelAdd
C
CModelAnalyzer
C
CModelEntity
►
C
CModelExpansion
C
ElementsMap
C
SetOfModelElements
C
CModelMerging
C
CModelParameter
C
CModelParameterCompartment
C
CModelParameterGroup
C
CModelParameterReactionParameter
C
CModelParameterSet
C
CModelParameterSpecies
C
CModelValue
C
CModelVersion
C
CModelVersionHierarchy
C
CModification
C
CMoietiesMethod
C
CMoietiesProblem
C
CMoietiesTask
C
CMoiety
C
Cmt19937
C
Cmt19937HR
C
CNewtonMethod
C
CNL2SOL
►
C
CNodeContextIterator
C
CStackElement
C
CNodeIterator
C
CNodeIteratorMode
C
CNodeK
C
CObjectInterface
C
CObjectLists
C
CODEExporter
C
CODEExporterBM
C
CODEExporterC
C
CODEExporterXPPAUT
C
ColorDefinitionHandler
C
ColumnScale
C
CommentHandler
C
CompareDefault
C
CompareDoubleWithNaN
C
compareGraphicalObjectsBySize
C
CompartmentAlias
C
CompartmentAnnotation
C
CompartmentGlyphHandler
C
CompartmentHandler
C
CompartmentInfo
C
complex
C
ConnectScheme
C
ConstantHandler
C
ConverterASTNode
C
Copasi2SBMLTranslator
C
COPASIHandler
►
C
COptions
C
COptionValue
C
COptionValueTemplate
C
COptItem
C
COptLog
C
COptLogEntry
C
COptLogItem
C
COptMethod
C
COptMethodCoranaWalk
C
COptMethodDE
C
COptMethodEP
C
COptMethodGA
C
COptMethodGASR
C
COptMethodHookeJeeves
C
COptMethodLevenbergMarquardt
C
COptMethodNelderMead
C
COptMethodNL2SOL
C
COptMethodPraxis
C
COptMethodPS
C
COptMethodSA
C
COptMethodSRES
C
COptMethodSS
C
COptMethodStatistics
C
COptMethodSteepestDescent
C
COptMethodTruncatedNewton
C
COptPopulationMethod
►
C
COptProblem
C
sCounter
C
COptTask
C
COscillationMethod
C
COscillationMethodIntegrate
C
COscillationProblem
C
COscillationTask
C
COutputAssistant
C
COutputDefinitionVector
C
COutputHandler
C
COutputInterface
C
COutputOption
C
CPermutation
C
CPlotColors
C
CPlotDataChannelSpec
C
CPlotItem
C
CPlotSpecification
C
CPointerContext
C
CPointerContextWithParent
C
CPointerMathContext
C
CPraxis
C
CProblemFactory
C
CProcessReport
C
CProcessReportItem
C
CProcessReportLevel
C
CProvenanceXMLWriter
C
CQ3DBarsModifier
►
C
CQBarChart
C
Data
C
CQBaseWidget
C
CQIconResource
C
Cr250
C
CRadau5
►
C
CRadau5Method
C
Data
C
State
►
C
CRandom
C
ExpVars
C
PoissonVars
C
CRandomSearch
C
CRaptorInit
C
CRDFGraph
►
C
CRDFGraphConverter
C
sChange
C
CRDFLiteral
C
CRDFNode
C
CRDFObject
C
CRDFParser
►
C
CRDFPredicate
C
sAllowedLocation
C
CRDFSubject
C
CRDFTriplet
C
CRDFUtilities
C
CRDFWriter
C
CReaction
C
CReactionInterface
C
CReactionParameter
C
CReactionResult
C
CReadConfig
C
CRealProblem
C
CRecentFiles
C
CReference
►
C
CRegisteredCommonName
C
ClassMemberRename
C
Rename
C
RenameInterface
C
CReport
C
CReportBody
C
CReportDefinition
C
CReportDefinitionVector
C
CReportTable
C
CRootContainer
►
C
CRootFinder
C
Eval
C
EvalTemplate
C
CRungeKutta
C
CSBMLExporter
►
C
CSBMLunit
C
SymbolicExponent
This class uniquely (in a given context) identifies a symbol
C
CSBMLunitInformation
►
C
CSBMLunitInterface
C
CEnvironmentInformation
C
CExpressionInformation
C
EvaluationResult
C
Statistics
C
CScanItem
C
CScanItemLinear
C
CScanItemRandom
C
CScanItemRepeat
C
CScanMethod
C
CScanProblem
C
CScanTask
►
C
CSEDMLExporter
C
KeyComparer
C
PlotItemStyleComparer
C
CSensItem
C
CSensMethod
C
CSensMethodLocalData
C
CSensProblem
C
CSensTask
C
CSlider
C
CSparseMatrix
C
CSparseMatrixElement
C
CSSAMethod
C
CStateTemplate
C
CStaticCallback
C
CStatistics
C
CSteadyStateMethod
C
CSteadyStateProblem
C
CSteadyStateTask
C
CStepMatrix
C
CStepMatrixColumn
C
CStochasticRungeKuttaRI5
C
CStochDirectMethod
C
CStochMethod
C
CStochNextReactionMethod
C
CStructureParser
C
CTableauLine
C
CTableauMatrix
C
CTableCell
C
CTableRow
C
CTaskEnum
C
CTaskFactory
C
CTauLeapMethod
►
C
CTimeSensLsodaMethod
C
Data
C
State
C
CTimeSensMethod
C
CTimeSensProblem
C
CTimeSensTask
C
CTimeSeries
C
CTotalNumberReference
C
CTrajAdaptiveSA
C
CTrajectoryMethod
►
C
CTrajectoryMethodDsaLsodar
C
CPartition
C
CTrajectoryProblem
C
CTrajectoryTask
C
CTransposeView
C
CTruncatedNewton
C
CTSSAMethod
Base class for all time scale separation analysis methods
C
CTSSAProblem
C
CTSSATask
C
CubicBezierHandler
►
C
CUndoData
C
CChangeSet
C
ChangeInfo
C
CUndoObjectInterface
C
CUndoStack
►
C
CUnit
C
SymbolComponent
C
CUnitComponent
C
CUnitDefinition
C
CUnitDefinitionDB
C
CUnitLowerTriangularView
C
CUnitParser
►
C
CUnitParserBase
C
Data
C
CUnitUpperTriangularView
C
CUnitValidator
C
CUpperTriangularView
C
CurveHandler
C
CValidatedUnit
C
CValidity
C
CVCard
C
CVector
C
CVectorCore
C
CVectorInterface
C
CVersion
C
Cxerrwd
C
CXMLAttributeList
►
C
CXMLHandler
C
sProcessLogic
C
CXMLHandlerFactory
C
CXMLParser
C
CXMLParserData
►
C
CZeroSet
C
CIndex
C
dgemm
C
DimensionsHandler
C
dls001
C
dlsa01
C
dlsr01
C
doublecomplex
C
DoubleLine
C
EditPoints
C
EllipseHandler
C
EventHandler
C
Expression2PresentationMML
C
Expression2PresentationMMLUnits
C
FDescent
C
FDescentTemplate
C
FittingItem
C
FlexLexer
C
FNL2SOL
C
FNL2SOLTemplate
C
FPraxis
C
FPraxisTemplate
C
FSwapBase
C
FSwapClass
C
FTruncatedNewton
C
FTruncatedNewtonTemplate
C
FunctionHandler
C
GradientStopHandler
C
GroupHandler
C
GUIHandler
C
icilist
C
ImageHandler
C
INCOMPATIBILITY
C
InitialStateHandler
C
inlist
C
KineticLawHandler
C
Label3D
C
LayoutHandler
C
Line
C
LinearAutoScaler2
Automatic beautifying of linear scales
C
LinearGradientHandler
C
LineDirection
C
LineEndingHandler
C
LineSegmentHandler
C
LinkTarget
C
ListOfCurveSegmentsHandler
C
ListOfGradientDefinitionsHandler
C
ListOfHandler
C
ListOfLayoutsHandler
C
MathMLHandler
C
MESSAGES
C
MetaboliteGlyphHandler
C
MetaboliteHandler
C
MetaboliteReferenceGlyphHandler
C
MethodHandler
C
MiriamAnnotationHandler
C
ModelHandler
C
ModelParameterGroupHandler
C
ModelParameterHandler
C
ModelParameterSetHandler
C
ModelValueHandler
C
ModifierHandler
C
Multitype
C
Namelist
C
ObjectHandler
C
olist
C
omp_info
C
Paint
C
ParameterDescriptionHandler
C
ParameterGroupHandler
C
ParameterHandler
C
ParameterTextHandler
C
PJAC
C
PJACFunctor
C
PlotItemHandler
C
PlotSpecificationHandler
C
PointHandler
C
PolygonHandler
C
PQNode
C
ProductHandler
C
Protein
C
ProteinModification
C
RadialGradientHandler
C
ReactantLink
C
ReactionAnnotation
C
ReactionGlyphHandler
C
ReactionHandler
C
ReactionModification
C
RectangleHandler
C
RenderCurveElementHandler
C
RenderCurveHandler
C
RenderInformationHandler
C
RenderTextHandler
C
ReportDefinitionHandler
C
ReportSectionHandler
C
ReportTargetHandler
C
ResultData
C
ResultParser
C
RowScale
C
SBMLDocumentLoader
C
SBMLImporter
C
SBMLIncompatibility
C
SBMLMapHandler
C
SbmlProgressCallback
C
SBMLReference
►
C
SBMLUnitSupport
C
SUnitInfo
C
SBMLUtils
C
SCopasiXMLGUI
C
SEDMLImporter
C
SedmlImportOptions
C
SedmlInfo
C
SEDMLUtils
C
simple_point
C
SIUnit
C
SliderHandler
C
SLVS
C
SLVSFunctor
C
SourceParameterHandler
C
SpeciesAlias
C
SpeciesAnnotation
C
SpeciesIdentity
C
SpeciesModification
C
SpeciesState
C
StateTemplateHandler
C
StateTemplateVariableHandler
C
StdException
C
StyleHandler
C
subscr_
C
SubstrateHandler
C
TableHandler
C
TaskHandler
C
TextGlyphHandler
C
UnitDefinitionHandler
C
UNKNOWNHandler
C
UnsupportedAnnotationHandler
C
UsualView
C
ValueScale
The standard (1:1) mapping class for axis numbering
C
Vardesc
C
VariableInfo
C
WizardDialog
C
yy_buffer_state
C
yy_trans_info
C
yyalloc
C
yyFlexLexer
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1.9.1
1.9.1 1.9.1