COPASI API
4.16.103
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#include <SBWTranslator.h>
Public Member Functions | |
Copasi2SBMLTranslator () | |
virtual | ~Copasi2SBMLTranslator () |
Static Public Member Functions | |
static void | registerMethods (SystemsBiologyWorkbench::MethodTable< Copasi2SBMLTranslator > &table) |
static std::string | translate (const std::string &sbmlString) |
static std::string | translateFileToSBML (const std::string &fileName) |
static std::string | translateToSBML (const std::string &copasiString) |
Protected Member Functions | |
SystemsBiologyWorkbench::DataBlockWriter | getAuthor (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getCopyright (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getDescription (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getFileExtension (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getFileType (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getName (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getURL (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | getVersion (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | translate (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | translateFileToSBML (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
SystemsBiologyWorkbench::DataBlockWriter | translateToSBML (SystemsBiologyWorkbench::Module from, SystemsBiologyWorkbench::DataBlockReader reader) |
Static Private Attributes | |
static int | mLevel = 3 |
static int | mVersion = 1 |
Definition at line 16 of file SBWTranslator.h.
Copasi2SBMLTranslator::Copasi2SBMLTranslator | ( | ) |
Definition at line 35 of file SBWTranslator.cpp.
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virtual |
Definition at line 38 of file SBWTranslator.cpp.
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protected |
Definition at line 110 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 120 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 115 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 130 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 135 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 98 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 125 of file SBWTranslator.cpp.
Referenced by registerMethods().
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Definition at line 104 of file SBWTranslator.cpp.
References CVersion::VERSION.
Referenced by registerMethods().
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Definition at line 42 of file SBWTranslator.cpp.
References getAuthor(), getCopyright(), getDescription(), getFileExtension(), getFileType(), getName(), getURL(), getVersion(), translate(), translateFileToSBML(), and translateToSBML().
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Definition at line 67 of file SBWTranslator.cpp.
References CCopasiRootContainer::addDatamodel(), CDirEntry::fileName(), COptions::getValue(), CCopasiDataModel::importSBMLFromString(), CCopasiRootContainer::init(), CDirEntry::makePathAbsolute(), CDirEntry::remove(), and CCopasiDataModel::saveModel().
Referenced by registerMethods().
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Definition at line 58 of file SBWTranslator.cpp.
References CCopasiRootContainer::addDatamodel(), CCopasiDataModel::exportSBMLToString(), CCopasiRootContainer::init(), and CCopasiDataModel::loadModel().
Referenced by main(), and registerMethods().
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Definition at line 86 of file SBWTranslator.cpp.
References CCopasiRootContainer::addDatamodel(), CCopasiDataModel::exportSBMLToString(), COptions::getPWD(), CCopasiRootContainer::init(), and CCopasiDataModel::loadModel().
Referenced by registerMethods().
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staticprivate |
Definition at line 44 of file SBWTranslator.h.
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staticprivate |
Definition at line 45 of file SBWTranslator.h.