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    COPASI API
    4.40.278
    
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#include <COptMethodLevenbergMarquardt.h>
Public Member Functions | |
| COptMethodLevenbergMarquardt (const CDataContainer *pParent, const CTaskEnum::Method &methodType=CTaskEnum::Method::LevenbergMarquardt, const CTaskEnum::Task &taskType=CTaskEnum::Task::optimization) | |
| COptMethodLevenbergMarquardt (const COptMethodLevenbergMarquardt &src, const CDataContainer *pParent) | |
| virtual const CVector< C_FLOAT64 > * | getBestParameters () const | 
| virtual C_FLOAT64 | getBestValue () const | 
| virtual const CVector< C_FLOAT64 > * | getCurrentParameters () const | 
| virtual C_FLOAT64 | getCurrentValue () const | 
| virtual unsigned C_INT32 | getMaxLogVerbosity () const | 
| virtual bool | optimise () | 
| virtual | ~COptMethodLevenbergMarquardt () | 
  Public Member Functions inherited from COptMethod | |
| COptMethod (const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType, const bool ¶llel) | |
| COptMethod (const COptMethod &src, const CDataContainer *pParent) | |
| const COptLog & | getMethodLog () const | 
| virtual bool | isValidProblem (const CCopasiProblem *pProblem) | 
| void | setProblem (COptProblem *problem) | 
| virtual | ~COptMethod () | 
  Public Member Functions inherited from CCopasiMethod | |
| CCopasiMethod (const CCopasiMethod &src, const CDataContainer *pParent) | |
| virtual void | clearCallBack () | 
| const CProcessReportLevel & | getCallBack () const | 
| CMathContainer * | getMathContainer () const | 
| const CTaskEnum::Method & | getSubType () const | 
| const CTaskEnum::Task & | getType () const | 
| virtual void | load (CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH) | 
| CCopasiMethod & | operator= (const CCopasiMethod &rhs) | 
| virtual void | print (std::ostream *ostream) const | 
| virtual void | printResult (std::ostream *ostream) const | 
| virtual bool | setCallBack (CProcessReportLevel callBack) | 
| void | setMathContainer (CMathContainer *pContainer) | 
| virtual | ~CCopasiMethod () | 
  Public Member Functions inherited from CCopasiParameterGroup | |
| bool | addGroup (const std::string &name) | 
| void | addParameter (CCopasiParameter *pParameter) | 
| bool | addParameter (const CCopasiParameter ¶meter) | 
| bool | addParameter (const std::string &name, const CCopasiParameter::Type type, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | 
| template<class CType > | |
| bool | addParameter (const std::string &name, const CCopasiParameter::Type type, const CType &value, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | 
| virtual bool | applyData (const CData &data, CUndoData::CChangeSet &changes) | 
| CCopasiParameterGroup * | assertGroup (const std::string &name, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | 
| template<class CType > | |
| CType * | assertParameter (const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | 
| index_iterator | beginIndex () const | 
| const_name_iterator | beginName () const | 
| CCopasiParameterGroup (const CCopasiParameterGroup &src, const CDataContainer *pParent=NULL) | |
| CCopasiParameterGroup (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="ParameterGroup") | |
| void | clear () | 
| virtual void | createUndoData (CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const | 
| virtual bool | elevateChildren () | 
| index_iterator | endIndex () const | 
| const_name_iterator | endName () const | 
| CCopasiParameterGroup & | getElementTemplates () | 
| const CCopasiParameterGroup & | getElementTemplates () const | 
| CCopasiParameterGroup * | getGroup (const size_t &index) | 
| const CCopasiParameterGroup * | getGroup (const size_t &index) const | 
| CCopasiParameterGroup * | getGroup (const std::string &name) | 
| const CCopasiParameterGroup * | getGroup (const std::string &name) const | 
| virtual size_t | getIndex (const CDataObject *pObject) const | 
| size_t | getIndex (const std::string &name) const | 
| std::string | getKey (const size_t &index) const | 
| std::string | getKey (const std::string &name) const | 
| virtual const std::string & | getName (const size_t &index) const | 
| virtual const CObjectInterface * | getObject (const CCommonName &cn) const | 
| CCopasiParameter * | getParameter (const size_t &index) | 
| const CCopasiParameter * | getParameter (const size_t &index) const | 
| CCopasiParameter * | getParameter (std::string name) | 
| const CCopasiParameter * | getParameter (std::string name) const | 
| CCopasiParameter::Type | getType (const size_t &index) const | 
| CCopasiParameter::Type | getType (const std::string &name) const | 
| std::string | getUniqueParameterName (const CCopasiParameter *pParameter) const | 
| template<class CType > | |
| CType & | getValue (const size_t &index) | 
| template<class CType > | |
| const CType & | getValue (const size_t &index) const | 
| template<class CType > | |
| CType & | getValue (const std::string &name) | 
| template<class CType > | |
| const CType & | getValue (const std::string &name) const | 
| bool | haveTemplate () const | 
| virtual CUndoObjectInterface * | insert (const CData &data) | 
| CCopasiParameterGroup & | operator= (const CCopasiParameterGroup &rhs) | 
| virtual bool | remove (CDataObject *pObject) | 
| bool | removeParameter (CCopasiParameter *pParameter) | 
| bool | removeParameter (const size_t &index) | 
| bool | removeParameter (const std::string &name) | 
| virtual void | setUserInterfaceFlag (const UserInterfaceFlag &flag) | 
| template<class CType > | |
| bool | setValue (const size_t &index, const CType &value) | 
| template<class CType > | |
| bool | setValue (const std::string &name, const CType &value) | 
| size_t | size (const UserInterfaceFlag &require=UserInterfaceFlag::None, const UserInterfaceFlag &exclude=UserInterfaceFlag::None) const | 
| bool | swap (const size_t &iFrom, const size_t &iTo) | 
| bool | swap (index_iterator &from, index_iterator &to) | 
| virtual CData | toData () const | 
| virtual void | updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject) | 
| virtual | ~CCopasiParameterGroup () | 
  Public Member Functions inherited from CCopasiParameter | |
| CCopasiParameter (const CCopasiParameter &src, const CDataContainer *pParent) | |
| CCopasiParameter (const std::string &name, const Type &type, const void *pValue=NULL, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="Parameter") | |
| virtual CCommonName | getCN () const override | 
| template<class CType > | |
| const CType & | getDefault () const | 
| virtual const std::string & | getKey () const override | 
| virtual std::string | getObjectDisplayName () const override | 
| const CCopasiParameter::Type & | getType () const | 
| const UserInterfaceFlag & | getUserInterfaceFlag () const | 
| template<class CType > | |
| std::vector< std::pair< CType, CType > > & | getValidValues () | 
| template<class CType > | |
| const std::vector< std::pair< CType, CType > > & | getValidValues () const | 
| void * | getValidValuesPointer () const | 
| template<class CType > | |
| CType & | getValue () | 
| template<class CType > | |
| const CType & | getValue () const | 
| virtual void * | getValuePointer () const override | 
| CDataObject * | getValueReference () const | 
| bool | hasValidValues () const | 
| bool | isBasic () const | 
| bool | isDefault () const | 
| bool | isEditable () const | 
| bool | isUnsupported () const | 
| bool | isValidValue (const bool &value) const | 
| bool | isValidValue (const C_FLOAT64 &value) const | 
| bool | isValidValue (const C_INT32 &value) const | 
| bool | isValidValue (const CCommonName &value) const | 
| template<class CType > | |
| bool | isValidValue (const CType &) const | 
| bool | isValidValue (const std::string &value) const | 
| bool | isValidValue (const std::vector< CCopasiParameter * > &value) const | 
| bool | isValidValue (const unsigned C_INT32 &value) const | 
| CCopasiParameter & | operator= (const CCopasiParameter &rhs) | 
| template<class CType > | |
| bool | setDefault (const CType &defaultValue) | 
| bool | setDefault (const std::vector< CCopasiParameter * > &defaultValue) | 
| virtual bool | setObjectParent (const CDataContainer *pParent) override | 
| template<class CType , class Enum > | |
| bool | setValidValues (const CEnumAnnotation< CType, Enum > &validValues) | 
| template<class CType > | |
| bool | setValidValues (const std::vector< std::pair< CType, CType > > &validValues) | 
| template<class CType > | |
| bool | setValue (const CType &value) | 
| bool | setValue (const std::vector< CCopasiParameter * > &value) | 
| virtual | ~CCopasiParameter () | 
  Public Member Functions inherited from CDataContainer | |
| virtual bool | add (CDataObject *pObject, const bool &adopt=true) | 
| virtual bool | appendDeletedDependentData (CUndoData &undoData) const | 
| CDataContainer (const CDataContainer &src, const CDataContainer *pParent) | |
| CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
| virtual std::string | getChildObjectUnits (const CDataObject *pObject) const | 
| void | getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const | 
| virtual objectMap & | getObjects () | 
| virtual const objectMap & | getObjects () const | 
| virtual const std::string | getUnits () const override | 
| virtual const CDataObject * | getValueObject () const override | 
| void | objectRenamed (CDataObject *pObject, const std::string &oldName) | 
| virtual | ~CDataContainer () | 
  Public Member Functions inherited from CDataObject | |
| void | addIssue (const CIssue &issue) | 
| void | addReference (const CDataContainer *pReference) | 
| virtual void | calculateValue () override | 
| CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL) | |
| virtual void | destruct () override | 
| virtual const CDataObject * | getDataObject () const override | 
| CDataContainer * | getObjectAncestor (const std::string &type) const | 
| CDataModel * | getObjectDataModel () const | 
| const CObjectInterface * | getObjectFromCN (const CCommonName &cn) const | 
| const std::string & | getObjectName () const | 
| CDataContainer * | getObjectParent () const | 
| const std::string & | getObjectType () const | 
| virtual const CObjectInterface::ObjectSet & | getPrerequisites () const override | 
| virtual const CValidity & | getValidity () const override | 
| bool | hasFlag (const Flag &flag) const | 
| virtual bool | isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override | 
| bool | prerequisitsContains (const DataObjectSet &objects) const | 
| void | removeIssue (const CIssue &issue) | 
| void | removeReference (const CDataContainer *pReference) | 
| bool | setObjectName (const std::string &name) | 
| void | validityChanged (const CValidity &changedValidity) override | 
| void | validityRemoved (const CValidity &changedValidity) | 
| virtual | ~CDataObject () | 
  Public Member Functions inherited from CObjectInterface | |
| CObjectInterface () | |
| CObjectInterface (const CObjectInterface &src) | |
| virtual | ~CObjectInterface () | 
  Public Member Functions inherited from CUndoObjectInterface | |
| CUndoObjectInterface () | |
| CUndoObjectInterface (const CUndoObjectInterface &src) | |
| bool | generateUuid () | 
| const xg::Guid & | getUuid () const | 
| bool | setUuid (const std::string &uuid) | 
| bool | setUuid (const xg::Guid &uuid) | 
| virtual | ~CUndoObjectInterface () | 
Private Member Functions | |
| virtual bool | cleanup () | 
| COptMethodLevenbergMarquardt () | |
| const C_FLOAT64 & | evaluate () | 
| void | gradient () | 
| void | hessian () | 
| virtual bool | initialize () | 
| void | initObjects () | 
Private Attributes | |
| CVector< C_FLOAT64 > | mBest | 
| C_FLOAT64 | mBestValue | 
| bool | mContinue | 
| CVector< C_FLOAT64 > | mCurrent | 
| C_FLOAT64 | mEvaluationValue | 
| CVector< C_FLOAT64 > | mGradient | 
| bool | mHaveResiduals | 
| CMatrix< C_FLOAT64 > | mHessian | 
| CMatrix< C_FLOAT64 > | mHessianLM | 
| size_t | mhIteration | 
| C_FLOAT64 | mInitialLamda | 
| unsigned C_INT32 | mIteration | 
| unsigned C_INT32 | mIterationLimit | 
| C_FLOAT64 | mLambdaDown | 
| C_FLOAT64 | mLambdaUp | 
| C_FLOAT64 | mModulation | 
| unsigned C_INT32 | mParameterOutOfBounds | 
| CMatrix< C_FLOAT64 > | mResidualJacobianT | 
| CVector< C_FLOAT64 > | mStep | 
| unsigned C_INT32 | mStopAfterStalledIterations | 
| CVector< C_FLOAT64 > | mTemp | 
| C_FLOAT64 | mTolerance | 
| size_t | mVariableSize | 
Additional Inherited Members | |
  Public Types inherited from CCopasiParameterGroup | |
| typedef CDataObjectMap::const_type_iterator< CCopasiParameter > | const_name_iterator | 
| typedef std::vector< CCopasiParameter * > | elements | 
| typedef elements::iterator | index_iterator | 
| typedef CDataObjectMap::type_iterator< CCopasiParameter > | name_iterator | 
  Public Types inherited from CCopasiParameter | |
| enum class | eUserInterfaceFlag { editable , basic , unsupported , __SIZE } | 
| enum class | Type {  DOUBLE = 0 , UDOUBLE , INT , UINT , BOOL , GROUP , STRING , CN , KEY , FILE , EXPRESSION , INVALID , __SIZE }  | 
| typedef CFlags< eUserInterfaceFlag > | UserInterfaceFlag | 
  Public Types inherited from CDataContainer | |
| typedef CDataObjectMap | objectMap | 
  Public Types inherited from CDataObject | |
| typedef std::set< const CDataObject * > | DataObjectSet | 
| enum | Flag {  Container , Vector , Matrix , NameVector , Reference , ValueBool , ValueInt , ValueInt64 , ValueDbl , NonUniqueName , StaticString , ValueString , Separator , DisplayName , ModelEntity , Array , DataModel , Root , Gui , __SIZE }  | 
  Public Types inherited from CObjectInterface | |
| typedef std::vector< const CDataContainer * > | ContainerList | 
| typedef std::set< const CObjectInterface * > | ObjectSet | 
  Static Public Member Functions inherited from CCopasiParameter | |
| static void | allocateValidValues (const Type &type, void *&pValidValues) | 
| static void | allocateValue (const Type &type, void *&pValue) | 
| static void | assignValue (const Type &type, void *&pValue, const void *pNewValue) | 
| static void | deleteValidValues (const Type &type, void *&pValidValues) | 
| static void | deleteValue (const Type &type, void *&pValue) | 
| static CCopasiParameter * | fromData (const CData &data, CUndoObjectInterface *pParent) | 
  Static Public Member Functions inherited from CDataContainer | |
| static CDataContainer * | fromData (const CData &data, CUndoObjectInterface *pParent) | 
  Static Public Member Functions inherited from CDataObject | |
| static CDataObject * | fromData (const CData &data, CUndoObjectInterface *pParent) | 
| static void | sanitizeObjectName (std::string &name) | 
  Static Public Member Functions inherited from CObjectInterface | |
| static const CDataObject * | DataObject (const CObjectInterface *pInterface) | 
| static CObjectInterface * | GetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName) | 
  Static Public Member Functions inherited from CUndoObjectInterface | |
| template<class CType > | |
| static CType * | fromData (const CData &, CUndoObjectInterface *) | 
  Static Public Attributes inherited from CCopasiParameter | |
| static const CEnumAnnotation< std::string, Type > | TypeName | 
| static const CEnumAnnotation< std::string, Type > | XMLType | 
  Static Public Attributes inherited from CDataContainer | |
| static const CObjectInterface::ContainerList | EmptyList | 
  Protected Member Functions inherited from COptMethod | |
| virtual void | signalMathContainerChanged () | 
  Protected Member Functions inherited from CCopasiMethod | |
| CCopasiMethod (const CCopasiMethod &src) | |
| CCopasiMethod (const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType) | |
  Protected Member Functions inherited from CCopasiParameterGroup | |
| CCopasiParameterGroup () | |
  Protected Member Functions inherited from CCopasiParameter | |
| CCopasiParameter (const CCopasiParameter &src) | |
  Protected Member Functions inherited from CDataContainer | |
| template<class CType > | |
| CDataMatrixReference< CType > * | addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | 
| template<class CType > | |
| CDataObjectReference< CType > * | addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | 
| template<class CType > | |
| CDataVectorReference< CType > * | addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | 
| CDataContainer (const CDataContainer &src) | |
| void | initObjects () | 
  Protected Member Functions inherited from CDataObject | |
| CDataObject () | |
| CDataObject (const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
  Static Protected Member Functions inherited from COptMethod | |
| static std::pair< C_FLOAT64, bool > | objectiveValue (COptProblem *pProblem, const CVectorCore< C_FLOAT64 > ¶meters) | 
| static void | reflect (COptProblem *pProblem, const C_FLOAT64 &bestValue, C_FLOAT64 &objectiveValue) | 
  Protected Attributes inherited from COptMethod | |
| unsigned C_INT32 | mLogVerbosity | 
| CMathContext | mMathContext | 
| COptLog | mMethodLog | 
| bool | mParallel | 
| COptTask * | mpParentTask | 
| COptProblemContext | mProblemContext | 
  Protected Attributes inherited from CCopasiMethod | |
| CMathContainer * | mpContainer | 
| CProcessReportLevel | mProcessReport | 
  Protected Attributes inherited from CCopasiParameter | |
| std::string | mKey | 
| void * | mpDefault | 
| void * | mpValidValues | 
| void * | mpValue | 
| CDataObject * | mpValueReference | 
| UserInterfaceFlag | mUserInterfaceFlag | 
  Protected Attributes inherited from CDataContainer | |
| objectMap | mObjects | 
  Protected Attributes inherited from CDataObject | |
| ObjectSet | mPrerequisits | 
| std::set< CDataContainer * > | mReferences | 
  Protected Attributes inherited from CObjectInterface | |
| CValidity | mValidity | 
| COptMethodLevenbergMarquardt::COptMethodLevenbergMarquardt | ( | const CDataContainer * | pParent, | 
| const CTaskEnum::Method & | methodType = CTaskEnum::Method::LevenbergMarquardt,  | 
        ||
| const CTaskEnum::Task & | taskType = CTaskEnum::Task::optimization  | 
        ||
| ) | 
Specific constructor
| const | CDataContainer * pParent | 
| const | CTaskEnum::Method & methodType (default: LevenbergMarquardt) | 
| const | CTaskEnum::Task & taskType (default: optimization) | 
References CCopasiParameterGroup::assertParameter(), C_FLOAT64, C_INT32, CCopasiParameter::DOUBLE, CCopasiParameter::editable, initObjects(), and CCopasiParameter::UINT.
| COptMethodLevenbergMarquardt::COptMethodLevenbergMarquardt | ( | const COptMethodLevenbergMarquardt & | src, | 
| const CDataContainer * | pParent | ||
| ) | 
Copy Constructor
| const | COptMethodLevenbergMarquardt & src | 
| const | CDataContainer * pParent (default: NULL) | 
References initObjects().
      
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Destructor
References cleanup().
      
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Default Constructor
      
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Cleanup arrays and pointers.
Reimplemented from COptMethod.
Referenced by initialize(), and ~COptMethodLevenbergMarquardt().
      
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Evaluate the objective function
References CContext< Data >::master(), mBestValue, mContinue, mEvaluationValue, and COptMethod::mProblemContext.
Referenced by gradient(), hessian(), and optimise().
      
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Returns the maximum verbosity at which the method can log.
Reimplemented from COptMethod.
      
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Calculate the gradient of the objective at the current parameters
References C_FLOAT64, evaluate(), CContext< Data >::master(), mContinue, mCurrent, mGradient, mModulation, COptMethod::mProblemContext, and mVariableSize.
Referenced by hessian().
      
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Calculate the Hessian of the objective at the current point
References CMatrix< CType >::array(), CVectorCore< CType >::array(), C_FLOAT64, C_INT, dgemm_(), evaluate(), CFitProblem::getResiduals(), CFitProblem::getTimeSensJac(), CFitProblem::getUseTimeSens(), gradient(), CContext< Data >::master(), mContinue, mCurrent, mGradient, mHaveResiduals, mHessian, mModulation, COptMethod::mProblemContext, mResidualJacobianT, mTemp, mVariableSize, CMatrix< CType >::numCols(), and CVectorCore< CType >::size().
Referenced by optimise().
      
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Initialize arrays and pointer.
Reimplemented from COptMethod.
References CProcessReportLevel::addItem(), cleanup(), CCopasiParameterGroup::getParameter(), CFitProblem::getResiduals(), COptMethod::initialize(), CContext< Data >::master(), mBest, mBestValue, mContinue, mCurrent, mGradient, mHaveResiduals, mHessian, mhIteration, mInitialLamda, mIteration, mIterationLimit, mLambdaDown, mLambdaUp, mModulation, COptMethod::mProblemContext, CCopasiMethod::mProcessReport, mResidualJacobianT, mStep, mStopAfterStalledIterations, mTolerance, mVariableSize, CMatrix< CType >::resize(), CVector< CType >::resize(), CFitProblem::setResidualsRequired(), and CVectorCore< CType >::size().
Referenced by optimise().
      
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Initialize contained objects.
References CDataContainer::addObjectReference(), mIteration, and CDataObject::ValueInt.
Referenced by COptMethodLevenbergMarquardt().
      
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Execute the optimization algorithm calling simulation routine when needed. It is noted that this procedure can give feedback of its progress by the callback function set with SetCallback. @ return success;
Reimplemented from COptMethod.
References CMatrix< CType >::array(), CVectorCore< CType >::array(), C_FLOAT64, C_INT, COptItem::checkConstraint(), dpotrf_(), dpotrs_(), dsytrf_(), COutputInterface::DURING, COptLog::enterLogEntry(), evaluate(), CProcessReportLevel::finishItem(), COptItem::getLowerBoundValue(), COptItem::getStartValue(), COptItem::getUpperBoundValue(), hessian(), initialize(), LAMBDA_MAX, CContext< Data >::master(), mBest, mBestValue, mContinue, mCurrent, mEvaluationValue, mGradient, mHessian, mHessianLM, mhIteration, mInitialLamda, mIteration, mIterationLimit, mLambdaDown, mLambdaUp, COptMethod::mLogVerbosity, COptMethod::mMethodLog, COutputInterface::MONITORING, mParameterOutOfBounds, COptMethod::mpParentTask, COptMethod::mProblemContext, CCopasiMethod::mProcessReport, mStep, mStopAfterStalledIterations, mTolerance, mVariableSize, CCopasiTask::output(), CProcessReportLevel::progressItem(), and CVector< CType >::resize().
The last individual
Referenced by getBestParameters(), initialize(), and optimise().
      
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The best value found so far
Referenced by evaluate(), getBestValue(), initialize(), and optimise().
      
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Flag indicating whether the computation shall continue
Referenced by evaluate(), gradient(), hessian(), initialize(), and optimise().
The current solution guess
Referenced by getCurrentParameters(), gradient(), hessian(), initialize(), and optimise().
      
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The result of a function evaluation
Referenced by evaluate(), getCurrentValue(), and optimise().
The gradient
Referenced by gradient(), hessian(), initialize(), and optimise().
      
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Indicate whether we have access to the residuals, i.e., it is a fitting problem we are working on.
Referenced by hessian(), and initialize().
The Hessian matrix
Referenced by hessian(), initialize(), and optimise().
The Hessian matrix modified according to Levenberg-Marquardt
Referenced by optimise().
      
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Handle to the process report item "Current Iteration"
Referenced by initialize(), and optimise().
      
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Referenced by initialize(), and optimise().
      
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The number of iterations
Referenced by initialize(), initObjects(), and optimise().
      
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The maximum number of iterations
Referenced by initialize(), and optimise().
      
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Referenced by initialize(), and optimise().
      
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Referenced by initialize(), and optimise().
      
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The modulation factor
Referenced by gradient(), hessian(), and initialize().
      
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Count of algorithm leaving parameter space
Referenced by optimise().
The transpose jacobian of the residuals.
Referenced by hessian(), and initialize().
The step taken
Referenced by initialize(), and optimise().
      
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if no improvement was made after # stalled iterations stop
Referenced by initialize(), and optimise().
Vector for temporary values
Referenced by hessian().
      
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The tolerance
Referenced by initialize(), and optimise().
      
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number of parameters
Referenced by gradient(), hessian(), initialize(), and optimise().