CTrajectoryMethod Class Reference

#include <CTrajectoryMethod.h>

Inheritance diagram for CTrajectoryMethod:

Collaboration diagram for CTrajectoryMethod:

Public Types
enum	Status { FAILURE = -1, NORMAL = 0, ROOT = 1 }
Public Types inherited from CCopasiMethod
enum	SubType {   unset = 0, RandomSearch, RandomSearchMaster, SimulatedAnnealing,   CoranaWalk, DifferentialEvolution, ScatterSearch, GeneticAlgorithm,   EvolutionaryProgram, SteepestDescent, HybridGASA, GeneticAlgorithmSR,   HookeJeeves, LevenbergMarquardt, NelderMead, SRES,   Statistics, ParticleSwarm, Praxis, TruncatedNewton,   Newton, deterministic, LSODAR, directMethod,   stochastic, tauLeap, adaptiveSA, hybrid,   hybridLSODA, hybridODE45, DsaLsodar, tssILDM,   tssILDMModified, tssCSP, mcaMethodReder, scanMethod,   lyapWolf, sensMethod, EFMAlgorithm, EFMBitPatternTreeAlgorithm,   EFMBitPatternAlgorithm, Householder, crossSectionMethod, linearNoiseApproximation }
Public Types inherited from CCopasiParameterGroup
typedef parameterGroup::iterator	index_iterator
typedef CCopasiContainer::objectMap::iterator	name_iterator
typedef std::vector < CCopasiParameter * >	parameterGroup
Public Types inherited from CCopasiParameter
enum	Type {   DOUBLE = 0, UDOUBLE, INT, UINT,   BOOL, GROUP, STRING, CN,   KEY, FILE, EXPRESSION, INVALID }
Public Types inherited from CCopasiContainer
typedef std::multimap < std::string, CCopasiObject * >	objectMap
Public Types inherited from CCopasiObject
typedef std::set< const CCopasiObject * >	DataObjectSet
typedef std::vector< Refresh * >	DataUpdateSequence
Public Types inherited from CObjectInterface
typedef std::set< const CObjectInterface * >	ObjectSet
typedef std::vector < CObjectInterface * >	UpdateSequence

Public Member Functions
	CTrajectoryMethod (const CTrajectoryMethod &src, const CCopasiContainer *pParent=NULL)
const CVector< C_INT > &	getRoots () const
virtual bool	isValidProblem (const CCopasiProblem *pProblem)
void	setCurrentState (CState *currentState)
void	setProblem (CTrajectoryProblem *problem)
virtual void	start (const CState *initialState)
virtual void	stateChanged ()
virtual Status	step (const double &deltaT)
	~CTrajectoryMethod ()
Public Member Functions inherited from CCopasiMethod
	CCopasiMethod (const CCopasiMethod &src, const CCopasiContainer *pParent=NULL)
const CCopasiMethod::SubType &	getSubType () const
const CCopasiTask::Type &	getType () const
virtual void	load (CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH)
virtual void	print (std::ostream *ostream) const
virtual void	printResult (std::ostream *ostream) const
virtual bool	setCallBack (CProcessReport *pCallBack)
virtual	~CCopasiMethod ()
Public Member Functions inherited from CCopasiParameterGroup
bool	addGroup (const std::string &name)
bool	addParameter (const CCopasiParameter &parameter)
bool	addParameter (const std::string &name, const CCopasiParameter::Type type)
template<class CType >
bool	addParameter (const std::string &name, const CCopasiParameter::Type type, const CType &value)
void	addParameter (CCopasiParameter *pParameter)
CCopasiParameterGroup *	assertGroup (const std::string &name)
template<class CType >
CCopasiParameter *	assertParameter (const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue)
index_iterator	beginIndex () const
name_iterator	beginName () const
	CCopasiParameterGroup (const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL)
	CCopasiParameterGroup (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup")
void	clear ()
virtual bool	elevateChildren ()
index_iterator	endIndex () const
name_iterator	endName () const
CCopasiParameterGroup *	getGroup (const std::string &name)
const CCopasiParameterGroup *	getGroup (const std::string &name) const
CCopasiParameterGroup *	getGroup (const size_t &index)
const CCopasiParameterGroup *	getGroup (const size_t &index) const
size_t	getIndex (const std::string &name) const
std::string	getKey (const std::string &name) const
std::string	getKey (const size_t &index) const
virtual const std::string &	getName (const size_t &index) const
virtual const CObjectInterface *	getObject (const CCopasiObjectName &cn) const
CCopasiParameter *	getParameter (const std::string &name)
const CCopasiParameter *	getParameter (const std::string &name) const
CCopasiParameter *	getParameter (const size_t &index)
const CCopasiParameter *	getParameter (const size_t &index) const
CCopasiParameter::Type	getType (const std::string &name) const
CCopasiParameter::Type	getType (const size_t &index) const
std::string	getUniqueParameterName (const CCopasiParameter *pParameter) const
const CCopasiParameter::Value &	getValue (const std::string &name) const
const CCopasiParameter::Value &	getValue (const size_t &index) const
CCopasiParameter::Value &	getValue (const std::string &name)
CCopasiParameter::Value &	getValue (const size_t &index)
CCopasiParameterGroup &	operator= (const CCopasiParameterGroup &rhs)
bool	removeParameter (const std::string &name)
bool	removeParameter (const size_t &index)
template<class CType >
bool	setValue (const std::string &name, const CType &value)
template<class CType >
bool	setValue (const size_t &index, const CType &value)
size_t	size () const
bool	swap (const size_t &iFrom, const size_t &iTo)
bool	swap (index_iterator &from, index_iterator &to)
virtual	~CCopasiParameterGroup ()
Public Member Functions inherited from CCopasiParameter
	CCopasiParameter (const CCopasiParameter &src, const CCopasiContainer *pParent=NULL)
	CCopasiParameter (const std::string &name, const Type &type, const void *pValue=NULL, const CCopasiContainer *pParent=NULL, const std::string &objectType="Parameter")
virtual CCopasiObjectName	getCN () const
virtual const std::string &	getKey () const
virtual std::string	getObjectDisplayName (bool regular=true, bool richtext=false) const
const CCopasiParameter::Type &	getType () const
const Value &	getValue () const
Value &	getValue ()
virtual void *	getValuePointer () const
CCopasiObject *	getValueReference () const
bool	isValidValue (const C_FLOAT64 &value) const
bool	isValidValue (const C_INT32 &value) const
bool	isValidValue (const unsigned C_INT32 &value) const
bool	isValidValue (const bool &value) const
bool	isValidValue (const std::string &value) const
bool	isValidValue (const CCopasiObjectName &value) const
bool	isValidValue (const std::vector< CCopasiParameter * > &value) const
CCopasiParameter &	operator= (const CCopasiParameter &rhs)
template<class CType >
bool	setValue (const CType &value)
bool	setValue (const std::vector< CCopasiParameter * > &value)
virtual	~CCopasiParameter ()
Public Member Functions inherited from CCopasiContainer
virtual bool	add (CCopasiObject *pObject, const bool &adopt=true)
	CCopasiContainer (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)
	CCopasiContainer (const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)
virtual std::string	getChildObjectUnits (const CCopasiObject *pObject) const
virtual const objectMap &	getObjects () const
virtual std::string	getUnits () const
virtual const CCopasiObject *	getValueObject () const
virtual bool	remove (CCopasiObject *pObject)
virtual	~CCopasiContainer ()
Public Member Functions inherited from CCopasiObject
void	addDirectDependency (const CCopasiObject *pObject)
	CCopasiObject (const CCopasiObject &src, const CCopasiContainer *pParent=NULL)
void	clearDirectDependencies ()
void	clearRefresh ()
bool	dependsOn (DataObjectSet candidates, const DataObjectSet &context=DataObjectSet()) const
void	getAllDependencies (DataObjectSet &dependencies, const DataObjectSet &context) const
virtual const DataObjectSet &	getDirectDependencies (const DataObjectSet &context=DataObjectSet()) const
CCopasiContainer *	getObjectAncestor (const std::string &type) const
CCopasiDataModel *	getObjectDataModel ()
const CCopasiDataModel *	getObjectDataModel () const
const std::string &	getObjectName () const
CCopasiContainer *	getObjectParent () const
const std::string &	getObjectType () const
virtual const CObjectInterface::ObjectSet &	getPrerequisites () const
virtual Refresh *	getRefresh () const
UpdateMethod *	getUpdateMethod () const
bool	hasCircularDependencies (DataObjectSet &candidates, DataObjectSet &verified, const DataObjectSet &context) const
bool	hasUpdateMethod () const
bool	isArray () const
bool	isContainer () const
bool	isDataModel () const
bool	isMatrix () const
bool	isNameVector () const
bool	isNonUniqueName () const
virtual bool	isPrerequisiteForContext (const CObjectInterface *pObject, const CMath::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const
bool	isReference () const
bool	isRoot () const
bool	isSeparator () const
bool	isStaticString () const
bool	isValueBool () const
bool	isValueDbl () const
bool	isValueInt () const
bool	isValueInt64 () const
bool	isValueString () const
bool	isVector () const
virtual bool	mustBeDeleted (const DataObjectSet &deletedObjects) const
void	removeDirectDependency (const CCopasiObject *pObject)
void	setDirectDependencies (const DataObjectSet &directDependencies)
bool	setObjectName (const std::string &name)
virtual bool	setObjectParent (const CCopasiContainer *pParent)
void	setObjectValue (const C_FLOAT64 &value)
void	setObjectValue (const C_INT32 &value)
void	setObjectValue (const bool &value)
template<class CType >
void	setRefresh (CType *pType, void(CType::*method)(void))
template<class CType >
void	setUpdateMethod (CType *pType, void(CType::*method)(const C_FLOAT64 &))
template<class CType >
void	setUpdateMethod (CType *pType, void(CType::*method)(const C_INT32 &))
template<class CType >
void	setUpdateMethod (CType *pType, void(CType::*method)(const bool &))
virtual	~CCopasiObject ()
Public Member Functions inherited from CObjectInterface
	CObjectInterface ()
virtual	~CObjectInterface ()

Static Public Member Functions
static CTrajectoryMethod *	createMethod (CCopasiMethod::SubType subType=CCopasiMethod::deterministic)
Static Public Member Functions inherited from CCopasiObject
static std::vector< Refresh * >	buildUpdateSequence (const DataObjectSet &objects, const DataObjectSet &uptoDateObjects, const DataObjectSet &context=DataObjectSet())
static void	setRenameHandler (CRenameHandler *rh)

Protected Member Functions
	CTrajectoryMethod (const CCopasiMethod::SubType &subType, const CCopasiContainer *pParent=NULL)
Protected Member Functions inherited from CCopasiMethod
	CCopasiMethod (const CCopasiTask::Type &taskType, const SubType &subType, const CCopasiContainer *pParent=NULL)
Protected Member Functions inherited from CCopasiParameterGroup
	CCopasiParameterGroup ()
Protected Member Functions inherited from CCopasiContainer
template<class CType >
CCopasiObject *	addMatrixReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)
template<class CType >
CCopasiObject *	addObjectReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)
template<class CType >
CCopasiObject *	addVectorReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)
void	initObjects ()
Protected Member Functions inherited from CCopasiObject
	CCopasiObject ()
	CCopasiObject (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)

Protected Attributes
CState *	mpCurrentState
CTrajectoryProblem *	mpProblem
CVector< C_INT >	mRoots
Protected Attributes inherited from CCopasiMethod
CProcessReport *	mpCallBack
Protected Attributes inherited from CCopasiParameter
std::string	mKey
CCopasiObject *	mpValueReference
size_t	mSize
Value	mValue
Protected Attributes inherited from CCopasiContainer
objectMap	mObjects

Private Member Functions
	CTrajectoryMethod ()

Additional Inherited Members
Static Public Attributes inherited from CCopasiMethod
static const std::string	SubTypeName []
static const char *	XMLSubType []
Static Public Attributes inherited from CCopasiParameter
static const std::string	TypeName []
static const char *	XMLType []
Static Public Attributes inherited from CCopasiContainer
static const std::vector < CCopasiContainer * >	EmptyList
Protected Types inherited from CCopasiObject
enum	Flag {   Container = 0x1, Vector = 0x2, Matrix = 0x4, NameVector = 0x8,   Reference = 0x10, ValueBool = 0x20, ValueInt = 0x40, ValueInt64 = 0x80,   ValueDbl = 0x100, NonUniqueName = 0x200, StaticString = 0x400, ValueString = 0x800,   Separator = 0x1000, ModelEntity = 0x2000, Array = 0x4000, DataModel = 0x8000,   Root = 0x10000, Gui = 0x20000 }
Static Protected Attributes inherited from CCopasiObject
static CRenameHandler *	smpRenameHandler = NULL

Detailed Description

Definition at line 43 of file CTrajectoryMethod.h.

Member Enumeration Documentation

enum CTrajectoryMethod::Status

Enumeration value for the return value

Enumerator
FAILURE
NORMAL
ROOT

Definition at line 49 of file CTrajectoryMethod.h.

  {
    FAILURE = -1,
    NORMAL = 0,
    ROOT = 1
  };

Constructor & Destructor Documentation

CTrajectoryMethod::CTrajectoryMethod ( )

private

Default constructor.

CTrajectoryMethod::CTrajectoryMethod ( const CCopasiMethod::SubType &  subType, const CCopasiContainer *  pParent = NULL  )

protected

Default constructor.

Parameters

const	CCopasiMethod::SubType & subType
const	CCopasiContainer * pParent (default: NULL)

Default constructor.

Definition at line 98 of file CTrajectoryMethod.cpp.

References CONSTRUCTOR_TRACE.

                                                                       :
  CCopasiMethod(CCopasiTask::timeCourse, subType, pParent),
  mpCurrentState(NULL),
  mpProblem(NULL),
  mRoots(0)
{CONSTRUCTOR_TRACE;}

CTrajectoryMethod::CTrajectoryMethod	(	const CTrajectoryMethod &	src,
		const CCopasiContainer *	pParent = NULL
	)

Copy constructor.

Parameters

const CTrajectoryMethod &	src
const	CCopasiContainer * pParent (default: NULL)

Copy constructor.

Parameters

const CTrajectoryMethod &

src

Definition at line 110 of file CTrajectoryMethod.cpp.

References CONSTRUCTOR_TRACE.

                                                                      :
  CCopasiMethod(src, pParent),
  mpCurrentState(src.mpCurrentState),
  mpProblem(src.mpProblem),
  mRoots(src.mRoots)
{CONSTRUCTOR_TRACE;}

CTrajectoryMethod::~CTrajectoryMethod

(

)

Destructor.

Definition at line 121 of file CTrajectoryMethod.cpp.

References DESTRUCTOR_TRACE.

{DESTRUCTOR_TRACE;}

Member Function Documentation

CTrajectoryMethod * CTrajectoryMethod::createMethod ( CCopasiMethod::SubType  subType = CCopasiMethod::deterministic )

static

Create a trajectory method for a special problem. Note: the returned object has to be released after use with delete a problem is also passed so that the method has a chance to choose an appropriate simulation method.

CTrajectoryMethod class. This class describes the interface to all integration methods. The various method like LSODA or Gillespie have to be derived from this class.

Created for COPASI by Stefan Hoops 2002

Definition at line 41 of file CTrajectoryMethod.cpp.

References CCopasiMethod::adaptiveSA, CHybridMethod::createHybridMethod(), CHybridMethodLSODA::createHybridMethodLSODA(), CCopasiMethod::deterministic, CCopasiMethod::directMethod, CCopasiMethod::DsaLsodar, fatalError, CCopasiMethod::hybrid, CCopasiMethod::hybridLSODA, CCopasiMethod::hybridODE45, CCopasiMethod::stochastic, CCopasiMethod::tauLeap, and CCopasiMethod::unset.

Referenced by CQTrajectoryWidget::createMethod(), CTrajectoryTask::createMethod(), CCrossSectionTask::createMethod(), and CTrajectoryTask::load().

{
  CTrajectoryMethod * pMethod = NULL;

  switch (subType)
    {
      case unset:
      case deterministic:
        pMethod = new CLsodaMethod();
        break;

      case stochastic:
        pMethod = new CStochNextReactionMethod();
        break;

      case directMethod:
        pMethod = new CStochDirectMethod();
        break;

      case tauLeap:
        pMethod = new CTauLeapMethod();
        break;

      case adaptiveSA:
        pMethod = new CTrajAdaptiveSA();
        break;

      case hybrid:
        pMethod = CHybridMethod::createHybridMethod();
        break;

      case hybridLSODA:
        pMethod = CHybridMethodLSODA::createHybridMethodLSODA();
        break;

#ifdef COPASI_DEBUG

      case hybridODE45:
        pMethod = new CHybridMethodODE45();
        break;
#endif // COPASI_DEBUG

      case DsaLsodar:
        pMethod = new CTrajectoryMethodDsaLsodar();
        break;

      default:
        fatalError();
        break;
    }

  return pMethod;
}

const CVector< C_INT > & CTrajectoryMethod::getRoots

(

)

const

Retrieve the roots.

Returns

const CVector< C_INT > & roots

Definition at line 181 of file CTrajectoryMethod.cpp.

References mRoots.

Referenced by CTrajectoryTask::processStep(), and CCrossSectionTask::processStep().

{
  return mRoots;
}

bool CTrajectoryMethod::isValidProblem ( const CCopasiProblem *  pProblem )

virtual

Check if the method is suitable for this problem

Returns

bool suitability of the method

Reimplemented from CCopasiMethod.

Reimplemented in CTrajectoryMethodDsaLsodar, CStochMethod, CTrajAdaptiveSA, CStochDirectMethod, CHybridMethodLSODA, CHybridMethodODE45, CHybridMethod, and CTauLeapMethod.

Definition at line 165 of file CTrajectoryMethod.cpp.

References CCopasiMessage::EXCEPTION, CCopasiMethod::isValidProblem(), and MCTrajectoryMethod.

Referenced by CTauLeapMethod::isValidProblem(), CHybridMethod::isValidProblem(), CHybridMethodODE45::isValidProblem(), CHybridMethodLSODA::isValidProblem(), CStochDirectMethod::isValidProblem(), CTrajAdaptiveSA::isValidProblem(), CStochMethod::isValidProblem(), and CTrajectoryMethodDsaLsodar::isValidProblem().

{
  if (!CCopasiMethod::isValidProblem(pProblem)) return false;

  const CTrajectoryProblem * pTP = dynamic_cast<const CTrajectoryProblem *>(pProblem);

  if (!pTP)
    {
      //not a TrajectoryProblem
      CCopasiMessage(CCopasiMessage::EXCEPTION, MCTrajectoryMethod + 8);
      return false;
    }

  return true;
}

void CTrajectoryMethod::setCurrentState

(

CState *

currentState

)

Set a pointer to the current state. This method is used by CTrajectoryTask::process() The results of the simulation are passed via this CState variable

Parameters

CState *

currentState

Definition at line 124 of file CTrajectoryMethod.cpp.

References mpCurrentState.

Referenced by CTrajectoryTask::processStart(), and CCrossSectionTask::processStart().

{
  mpCurrentState = currentState;
}

void CTrajectoryMethod::setProblem

(

CTrajectoryProblem *

problem

)

Set a pointer to the problem. This method is used by CTrajectory

Parameters

CTrajectoryProblem *

problem

Definition at line 134 of file CTrajectoryMethod.cpp.

References mpProblem.

Referenced by CTrajectoryTask::initialize(), and CCrossSectionTask::initialize().

{mpProblem = problem;}

void CTrajectoryMethod::start ( const CState *  initialState )

virtual

This instructs the method to prepare for integration starting with the initialState given.

Parameters

const CState *

initialState

This instructs the method to calculate a a time step of deltaT starting with the initialState given. The new state (after deltaT) is expected in the current state. The return value is the actual timestep taken.

Parameters

double &	deltaT
const CState *	initialState

Returns

"const double &" actualDeltaT

Reimplemented in CTrajectoryMethodDsaLsodar, CLsodaMethod, CStochMethod, CTrajAdaptiveSA, CHybridMethodODE45, CStochDirectMethod, CHybridMethodLSODA, CHybridMethod, and CTauLeapMethod.

Definition at line 161 of file CTrajectoryMethod.cpp.

Referenced by CTrajectoryTask::processStart(), and CCrossSectionTask::processStart().

{return;}

void CTrajectoryMethod::stateChanged ( )

virtual

Inform the trajectory method that the state has changed outside its control

Reimplemented in CTrajectoryMethodDsaLsodar, and CLsodaMethod.

Definition at line 138 of file CTrajectoryMethod.cpp.

Referenced by CTrajectoryTask::processStep(), and CCrossSectionTask::processStep().

{}

CTrajectoryMethod::Status CTrajectoryMethod::step ( const double &  deltaT )

virtual

This instructs the method to calculate a time step of deltaT starting with the current state, i.e., the result of the previous step. The new state (after deltaT) is expected in the current state. The return value is the actual timestep taken.

Parameters

const double &

deltaT

Returns

Status status

This instructs the method to calculate a a time step of deltaT starting with the current state, i.e., the result of the previous step. The new state (after deltaT) is expected in the current state. The return value is the actual timestep taken.

Parameters

const double &

deltaT

Reimplemented in CHybridMethodODE45, CTrajectoryMethodDsaLsodar, CLsodaMethod, CStochMethod, CTrajAdaptiveSA, CStochDirectMethod, CHybridMethodLSODA, CHybridMethod, and CTauLeapMethod.

Definition at line 149 of file CTrajectoryMethod.cpp.

References FAILURE.

Referenced by CTrajectoryTask::processStep(), and CCrossSectionTask::processStep().

{return FAILURE;}

Member Data Documentation

CState* CTrajectoryMethod::mpCurrentState

protected

A pointer to the current state. This is set from outside with the setState() method and never changed anywhere else. It's used to report the results to the calling TrajectoryTask

Definition at line 63 of file CTrajectoryMethod.h.

Referenced by CHybridNextReactionLSODAMethod::doSingleStep(), CHybridNextReactionRKMethod::doSingleStep(), CTrajectoryMethodDsaLsodar::doSingleStep(), CHybridMethod::outputData(), CHybridMethodLSODA::outputData(), CHybridMethod::outputDebug(), CHybridMethodODE45::outputDebug(), CHybridMethodLSODA::outputDebug(), CHybridMethod::partitionSystem(), setCurrentState(), CTauLeapMethod::start(), CHybridMethod::start(), CStochDirectMethod::start(), CTrajAdaptiveSA::start(), CStochMethod::start(), CLsodaMethod::stateChanged(), CTrajectoryMethodDsaLsodar::stateChanged(), CTauLeapMethod::step(), CHybridMethod::step(), CHybridMethodLSODA::step(), CStochDirectMethod::step(), CTrajAdaptiveSA::step(), CStochMethod::step(), CLsodaMethod::step(), CTrajectoryMethodDsaLsodar::step(), and CHybridMethodODE45::step().

CTrajectoryProblem* CTrajectoryMethod::mpProblem

protected

A pointer to the trajectory problem.

Definition at line 68 of file CTrajectoryMethod.h.

Referenced by CHybridMethodLSODA::evalF(), CHybridMethodODE45::initMethod(), CHybridMethodLSODA::initMethod(), CHybridMethodLSODA::integrateDeterministicPart(), CHybridMethodLSODA::partitionSystem(), setProblem(), CTauLeapMethod::start(), CHybridMethod::start(), CHybridMethodLSODA::start(), CStochDirectMethod::start(), CHybridMethodODE45::start(), CTrajAdaptiveSA::start(), CStochMethod::start(), CLsodaMethod::start(), CTauLeapMethod::step(), CHybridMethod::step(), CHybridMethodLSODA::step(), CStochDirectMethod::step(), CTrajAdaptiveSA::step(), and CStochMethod::step().

CVector< C_INT > CTrajectoryMethod::mRoots

protected

Vector containing information on the current roots

Definition at line 73 of file CTrajectoryMethod.h.

Referenced by CLsodaMethod::createRootMask(), CLsodaMethod::evalR(), getRoots(), CLsodaMethod::peekAhead(), CLsodaMethod::start(), and CLsodaMethod::step().

---

The documentation for this class was generated from the following files:

• CTrajectoryMethod.h
• CTrajectoryMethod.cpp