#include <CModified.h>

Inheritance diagram for CModification:

Collaboration diagram for CModification:

Public Member Functions
	CModification (const std::string &objectName, const CCopasiContainer *pParent=NULL)

	CModification (const CRDFTriplet &triplet, const std::string &objectName="", const CCopasiContainer *pParent=NULL)

	CModification (const CModification &src, const CCopasiContainer *pParent=NULL)

const std::string &	getDate () const

virtual const std::string &	getKey () const

const CRDFTriplet &	getTriplet () const

void	setDate (const std::string &date)

	~CModification ()

Public Member Functions inherited from CCopasiContainer
virtual bool	add (CCopasiObject *pObject, const bool &adopt=true)

	CCopasiContainer (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)

	CCopasiContainer (const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)

virtual std::string	getChildObjectUnits (const CCopasiObject *pObject) const

virtual const CObjectInterface *	getObject (const CCopasiObjectName &cn) const

virtual const objectMap &	getObjects () const

virtual std::string	getUnits () const

virtual const CCopasiObject *	getValueObject () const

virtual bool	remove (CCopasiObject *pObject)

virtual	~CCopasiContainer ()

Public Member Functions inherited from CCopasiObject
void	addDirectDependency (const CCopasiObject *pObject)

	CCopasiObject (const CCopasiObject &src, const CCopasiContainer *pParent=NULL)

void	clearDirectDependencies ()

void	clearRefresh ()

bool	dependsOn (DataObjectSet candidates, const DataObjectSet &context=DataObjectSet()) const

void	getAllDependencies (DataObjectSet &dependencies, const DataObjectSet &context) const

virtual CCopasiObjectName	getCN () const

virtual const DataObjectSet &	getDirectDependencies (const DataObjectSet &context=DataObjectSet()) const

CCopasiContainer *	getObjectAncestor (const std::string &type) const

CCopasiDataModel *	getObjectDataModel ()

const CCopasiDataModel *	getObjectDataModel () const

virtual std::string	getObjectDisplayName (bool regular=true, bool richtext=false) const

const std::string &	getObjectName () const

CCopasiContainer *	getObjectParent () const

const std::string &	getObjectType () const

virtual const CObjectInterface::ObjectSet &	getPrerequisites () const

virtual Refresh *	getRefresh () const

UpdateMethod *	getUpdateMethod () const

virtual void *	getValuePointer () const

bool	hasCircularDependencies (DataObjectSet &candidates, DataObjectSet &verified, const DataObjectSet &context) const

bool	hasUpdateMethod () const

bool	isArray () const

bool	isContainer () const

bool	isDataModel () const

bool	isMatrix () const

bool	isNameVector () const

bool	isNonUniqueName () const

virtual bool	isPrerequisiteForContext (const CObjectInterface *pObject, const CMath::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const

bool	isReference () const

bool	isRoot () const

bool	isSeparator () const

bool	isStaticString () const

bool	isValueBool () const

bool	isValueDbl () const

bool	isValueInt () const

bool	isValueInt64 () const

bool	isValueString () const

bool	isVector () const

virtual bool	mustBeDeleted (const DataObjectSet &deletedObjects) const

virtual void	print (std::ostream *ostream) const

void	removeDirectDependency (const CCopasiObject *pObject)

void	setDirectDependencies (const DataObjectSet &directDependencies)

bool	setObjectName (const std::string &name)

virtual bool	setObjectParent (const CCopasiContainer *pParent)

void	setObjectValue (const C_FLOAT64 &value)

void	setObjectValue (const C_INT32 &value)

void	setObjectValue (const bool &value)

template<class CType >
void	setRefresh (CType pType, void(CType::method)(void))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const C_FLOAT64 &))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const C_INT32 &))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const bool &))

virtual	~CCopasiObject ()

Public Member Functions inherited from CObjectInterface
	CObjectInterface ()

virtual	~CObjectInterface ()

Private Attributes
std::string	mKey

CRDFPredicate::Path	mNodePath

CRDFTriplet	mTriplet

Additional Inherited Members
Public Types inherited from CCopasiContainer
typedef std::multimap < std::string, CCopasiObject * >	objectMap

Public Types inherited from CCopasiObject
typedef std::set< const CCopasiObject * >	DataObjectSet

typedef std::vector< Refresh * >	DataUpdateSequence

Public Types inherited from CObjectInterface
typedef std::set< const CObjectInterface * >	ObjectSet

typedef std::vector < CObjectInterface * >	UpdateSequence

Static Public Member Functions inherited from CCopasiObject
static std::vector< Refresh * >	buildUpdateSequence (const DataObjectSet &objects, const DataObjectSet &uptoDateObjects, const DataObjectSet &context=DataObjectSet())

static void	setRenameHandler (CRenameHandler *rh)

Static Public Attributes inherited from CCopasiContainer
static const std::vector < CCopasiContainer * >	EmptyList

Protected Types inherited from CCopasiObject
enum	Flag { Container = 0x1, Vector = 0x2, Matrix = 0x4, NameVector = 0x8, Reference = 0x10, ValueBool = 0x20, ValueInt = 0x40, ValueInt64 = 0x80, ValueDbl = 0x100, NonUniqueName = 0x200, StaticString = 0x400, ValueString = 0x800, Separator = 0x1000, ModelEntity = 0x2000, Array = 0x4000, DataModel = 0x8000, Root = 0x10000, Gui = 0x20000 }

Protected Member Functions inherited from CCopasiContainer
template<class CType >
CCopasiObject *	addMatrixReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

template<class CType >
CCopasiObject *	addObjectReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

template<class CType >
CCopasiObject *	addVectorReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

void	initObjects ()

Protected Member Functions inherited from CCopasiObject
	CCopasiObject ()

	CCopasiObject (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)

Protected Attributes inherited from CCopasiContainer
objectMap	mObjects

Static Protected Attributes inherited from CCopasiObject
static CRenameHandler *	smpRenameHandler = NULL

Detailed Description

CModified: Stores Modification dates.

Definition at line 31 of file CModified.h.

Constructor & Destructor Documentation

CModification::CModification	(	const std::string &	objectName,
		const CCopasiContainer *	pParent = `NULL`
	)

Default constructor

Parameters

const	std::string & objectName
const	CCopasiContainer * pParent (default: NULL)

Definition at line 26 of file CModified.cpp.

                                                               :
     CCopasiContainer(objectName, pParent, "Modification"),
     mTriplet(),
     mNodePath(),
     mKey(CCopasiRootContainer::getKeyFactory()->add("Modification", this))
 {}

CModification::CModification	(	const CRDFTriplet &	triplet,
		const std::string &	objectName = `""`,
		const CCopasiContainer *	pParent = `NULL`
	)

Specific constructor

Parameters

const	CRDFTriplet & triplet
const	std::string & objectName (default: "")
const	CCopasiContainer * pParent (default: NULL)

Definition at line 34 of file CModified.cpp.

References CRDFNode::getPath(), mNodePath, mTriplet, and CRDFTriplet::pObject.

                                                               :
     CCopasiContainer(objectName, pParent, "Modification"),
     mTriplet(triplet),
     mNodePath(),
     mKey(CCopasiRootContainer::getKeyFactory()->add("Modification", this))
 {
   if (!mTriplet)
     return;
 
   mNodePath = mTriplet.pObject->getPath();
 }

CModification::CModification	(	const CModification &	src,
		const CCopasiContainer *	pParent = `NULL`
	)

Copy constructor

Parameters

const CModification &	src
const	CCopasiContainer * pParent (default: NULL)

Definition at line 48 of file CModified.cpp.

                                                               :
     CCopasiContainer(src, pParent),
     mTriplet(src.mTriplet),
     mNodePath(src.mNodePath),
     mKey(CCopasiRootContainer::getKeyFactory()->add("Modification", this))
 {}

CModification::~CModification ( )

Destructor

Definition at line 56 of file CModified.cpp.

References CCopasiRootContainer::getKeyFactory(), mKey, and CKeyFactory::remove().

 {
   CCopasiRootContainer::getKeyFactory()->remove(mKey);
 }

Member Function Documentation

const std::string & CModification::getDate ( ) const

Definition at line 70 of file CModified.cpp.

References CRDFPredicate::dcterms_W3CDTF, CRDFNode::getFieldValue(), mTriplet, and CRDFTriplet::pObject.

Referenced by test000092::test_miriam_export_8(), test000092::test_miriam_export_9(), test000092::test_miriam_import_1(), and CSBMLExporter::updateMIRIAMAnnotation().

71 {return mTriplet.pObject->getFieldValue(CRDFPredicate::dcterms_W3CDTF);}

CRDFPredicate::dcterms_W3CDTF

Definition: CRDFPredicate.h:71

CRDFNode::getFieldValue

const std::string & getFieldValue(const CRDFPredicate::ePredicateType &predicate) const

Definition: CRDFNode.cpp:113

CModification::mTriplet

CRDFTriplet mTriplet

Definition: CModified.h:38

CRDFTriplet::pObject

CRDFNode * pObject

Definition: CRDFTriplet.h:42

const std::string & CModification::getKey ( ) const

virtual

Reimplemented from CCopasiObject.

Definition at line 64 of file CModified.cpp.

References mKey.

65 {return mKey;}

CModification::mKey

std::string mKey

Definition: CModified.h:48

const CRDFTriplet & CModification::getTriplet ( ) const

Definition at line 61 of file CModified.cpp.

References mTriplet.

Referenced by CMIRIAMInfo::removeModification().

62 {return mTriplet;}

CModification::mTriplet

CRDFTriplet mTriplet

Definition: CModified.h:38

void CModification::setDate ( const std::string & date )

Definition at line 67 of file CModified.cpp.

References CRDFPredicate::dcterms_W3CDTF, mNodePath, mTriplet, CRDFTriplet::pObject, and CRDFNode::setFieldValue().

Referenced by CMIRIAMInfo::createModification().

68 {mTriplet.pObject->setFieldValue(date, CRDFPredicate::dcterms_W3CDTF, mNodePath);}

CRDFPredicate::dcterms_W3CDTF

Definition: CRDFPredicate.h:71

CModification::mNodePath

CRDFPredicate::Path mNodePath

Definition: CModified.h:43

CRDFNode::setFieldValue

bool setFieldValue(const CMIRIAMResourceObject &value, const CRDFPredicate::ePredicateType &predicate, const CRDFPredicate::Path &nodePath)

Definition: CRDFNode.cpp:142

CModification::mTriplet

CRDFTriplet mTriplet

Definition: CModified.h:38

CRDFTriplet::pObject

CRDFNode * pObject

Definition: CRDFTriplet.h:42

Member Data Documentation

std::string CModification::mKey

private

The key of the object needed for the copasi tables.

Definition at line 48 of file CModified.h.

Referenced by getKey(), and ~CModification().

CRDFPredicate::Path CModification::mNodePath

private

The predicate path to the node.

Definition at line 43 of file CModified.h.

Referenced by CModification(), and setDate().

CRDFTriplet CModification::mTriplet

private

Triplet in the RDF graph representing the reference.

Definition at line 38 of file CModified.h.

Referenced by CModification(), getDate(), getTriplet(), and setDate().

The documentation for this class was generated from the following files:

Public Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation