CLayoutInitializer Class Reference

#include <CLayoutInitializer.h>

Static Protected Member Functions
static CLCompartmentGlyph *	createCompartmentGlyph (const CCompartment *c)
static CLMetabGlyph *	createMetabGlyph (const CMetab *m)
static CLReactionGlyph *	createReactionGlyph (const CReaction *r, const std::map< std::string, std::string > &mm)

Detailed Description

This class contains (static) methods that initialize the layout data structure from a copasi model. A proper layout is not generated, this is rather a starting point for the layout algorithms

Member Function Documentation

createCompartmentGlyph()

CLCompartmentGlyph * CLayoutInitializer::createCompartmentGlyph ( const CCompartment *  c )

staticprotected

one layout element is created for every model element. This acts as a pseudo constructor for a CLayout.

References CModelEntity::getKey(), and CLGraphicalObject::setModelObjectKey().

createMetabGlyph()

CLMetabGlyph * CLayoutInitializer::createMetabGlyph ( const CMetab *  m )

staticprotected

References CModelEntity::getKey(), and CLGraphicalObject::setModelObjectKey().

createReactionGlyph()

CLReactionGlyph * CLayoutInitializer::createReactionGlyph ( const CReaction *  r, const std::map< std::string, std::string > &  mm  )

staticprotected

References CLReactionGlyph::addMetabReferenceGlyph(), CReaction::getChemEq(), CReaction::getKey(), CChemEq::getModifiers(), CChemEq::getProducts(), CChemEq::getSubstrates(), CLMetabReferenceGlyph::MODIFIER, CLMetabReferenceGlyph::PRODUCT, CLMetabReferenceGlyph::setMetabGlyphKey(), CLGraphicalObject::setModelObjectKey(), CLMetabReferenceGlyph::setRole(), CDataVector< CType >::size(), and CLMetabReferenceGlyph::SUBSTRATE.

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The documentation for this class was generated from the following files:

• CLayoutInitializer.h
• CLayoutInitializer.cpp