#include <CEvaluationNodeDelay.h>

Inheritance diagram for CEvaluationNodeDelay:

Public Member Functions
	CEvaluationNodeDelay (const CEvaluationNodeDelay &src)

	CEvaluationNodeDelay (const SubType &subType, const Data &data)

virtual CIssue	compile () override

virtual std::string	getBerkeleyMadonnaString (const std::vector< std::string > &children) const override

virtual std::string	getCCodeString (const std::vector< std::string > &children) const override

virtual std::string	getDisplayString (const std::vector< std::string > &children) const override

virtual std::string	getInfix (const std::vector< std::string > &children) const override

virtual std::string	getMMLString (const std::vector< std::string > &children, bool expand, const std::vector< std::vector< std::string > > &variables) const override

virtual CValidatedUnit	getUnit (const CMathContainer &container, const std::vector< CValidatedUnit > &units) const override

virtual std::string	getXPPString (const std::vector< std::string > &children) const override

virtual CValidatedUnit	setUnit (const CMathContainer &container, const std::map< CEvaluationNode , CValidatedUnit > &currentUnits, std::map< CEvaluationNode , CValidatedUnit > &targetUnits) const override

ASTNode *	toAST (const CDataModel *pDataModel) const override

virtual	~CEvaluationNodeDelay ()

Public Member Functions inherited from CEvaluationNode
void	addChildren (const std::vector< CEvaluationNode * > &children)

std::string	buildBerkeleyMadonnaString () const

std::string	buildCCodeString () const

std::string	buildDisplayString () const

std::string	buildInfix () const

std::string	buildMMLString (bool expand, const std::vector< std::vector< std::string > > &variables) const

std::string	buildXPPString () const

virtual void	calculate ()

	CEvaluationNode ()

	CEvaluationNode (const CEvaluationNode &src)

CEvaluationNode *	copyBranch () const

CEvaluationNode *	copyNode (CEvaluationNode child1, CEvaluationNode child2) const

CEvaluationNode *	copyNode (const std::vector< CEvaluationNode * > &children) const

const CEvaluationNode *	findTopMinus (const std::vector< CFunctionAnalyzer::CValue > &callParameters) const

const CEvaluationTree *	getTree () const

const C_FLOAT64 *	getValuePointer () const

const ValueType &	getValueType () const

virtual bool	isBoolean () const

const MainType &	mainType () const

bool	operator!= (const CEvaluationNode &right) const

bool	operator< (const CEvaluationNode &rhs)

bool	operator< (const CEvaluationNode &right) const

bool	operator== (const CEvaluationNode &right) const

void	printRecursively () const

void	printRecursively (std::ostream &os, int indent=0) const

void	setTree (const CEvaluationTree *pTree)

virtual CIssue	setValueType (const ValueType &valueType)

virtual CEvaluationNode *	simplifyNode (const std::vector< CEvaluationNode * > &children) const

CEvaluationNode *	splitBranch (const CEvaluationNode *splitnode, bool left) const

const SubType &	subType () const

virtual	~CEvaluationNode ()

Public Member Functions inherited from CCopasiNode< std::string >
virtual bool	addChild (CCopasiNode< Data > pChild, CCopasiNode< Data > pAfter=NULL)

bool	addSibling (CCopasiNode< Data > pSibling, CCopasiNode< Data > pAfter=NULL)

	CCopasiNode (CCopasiNode< Data > *pParent=NULL)

	CCopasiNode (const CCopasiNode< Data > &src)

	CCopasiNode (const Data &data, CCopasiNode< Data > *pParent=NULL)

bool	deleteChildren ()

CCopasiNode< Data > *	getChild ()

const CCopasiNode< Data > *	getChild () const

CCopasiNode< Data > *	getChild (const size_t &index)

const CCopasiNode< Data > *	getChild (const size_t &index) const

virtual Data &	getData ()

virtual const Data &	getData () const

CCopasiNode< Data > *	getNext ()

const CCopasiNode< Data > *	getNext () const

CCopasiNode< Data > *	getNextNonChild ()

const CCopasiNode< Data > *	getNextNonChild () const

size_t	getNumChildren () const

CCopasiNode< Data > *	getParent ()

const CCopasiNode< Data > *	getParent () const

CCopasiNode< Data > *	getSibling ()

const CCopasiNode< Data > *	getSibling () const

virtual bool	removeChild (CCopasiNode< Data > *pChild)

virtual bool	setData (const Data &data)

virtual	~CCopasiNode ()

Static Public Member Functions
static CEvaluationNode *	fromAST (const ASTNode pASTNode, const std::vector< CEvaluationNode > &children)

Static Public Member Functions inherited from CEvaluationNode
static CEvaluationNode *	create (const MainType &mainType, const SubType &subType, const std::string &data)

static bool	isKeyword (const std::string &str)

Private Member Functions
	CEvaluationNodeDelay ()

Private Attributes
CEvaluationNode *	mpDelayLagNode

const C_FLOAT64 *	mpDelayLagValue

CEvaluationNode *	mpDelayValueNode

const C_FLOAT64 *	mpDelayValueValue

Additional Inherited Members
Public Types inherited from CEvaluationNode
enum class	MainType { INVALID , NUMBER , CONSTANT , OPERATOR , OBJECT , FUNCTION , CALL , STRUCTURE , CHOICE , VARIABLE , WHITESPACE , LOGICAL , MV_FUNCTION , VECTOR , DELAY , UNIT , __SIZE }

enum class	SubType { DEFAULT , DELAY , IF , VECTOR , CN , DOUBLE , FUNCTION , LOG , OPEN , PI , POWER , EXPRESSION , POINTER , EXPONENTIALE , INTEGER , LOG10 , MULTIPLY , OR , VECTOROPEN , COMMA , DIVIDE , ENOTATION , EXP , True , XOR , RATIONALE , AND , CLOSE , False , MODULUS , SIN , VECTORCLOSE , COS , EQ , Infinity , PLUS , NaN , MINUS , NE , TAN , REMAINDER , GT , SEC , CSC , GE , COT , LT , LE , SINH , COSH , TANH , SECH , CSCH , COTH , ARCSIN , ARCCOS , ARCTAN , ARCSEC , ARCCSC , ARCCOT , ARCSINH , ARCCOSH , ARCTANH , ARCSECH , ARCCSCH , ARCCOTH , SQRT , ABS , FLOOR , CEIL , FACTORIAL , NOT , RUNIFORM , RNORMAL , MAX , MIN , RGAMMA , RPOISSON , SIGN , AVOGADRO , INVALID , __SIZE }

enum class	ValueType { Unknown , Boolean , Number , __SIZE }

Public Types inherited from CCopasiNode< std::string >
typedef std::string	Data

Static Public Attributes inherited from CEvaluationNode
static const CEnumAnnotation< std::string, MainType >	MainTypeName

static const CEnumAnnotation< std::string, SubType >	SubTypeName

Protected Member Functions inherited from CEvaluationNode
	CEvaluationNode (const MainType &type, const SubType &subType, const Data &data)

Protected Member Functions inherited from CCopasiNode< std::string >
bool	setChild (CCopasiNode< Data > *pChild)

bool	setParent (CCopasiNode< Data > *pParent)

bool	setSibling (CCopasiNode< Data > *pSibling)

Protected Attributes inherited from CEvaluationNode
MainType	mMainType

class CEvaluationNode::CPrecedence	mPrecedence

const CEvaluationTree *	mpTree

const C_FLOAT64 *	mpValue

SubType	mSubType

C_FLOAT64	mValue

ValueType	mValueType

Protected Attributes inherited from CCopasiNode< std::string >
Data	mData

Detailed Description

This is class for nodes representing the (SBML) delay function.

Constructor & Destructor Documentation

◆ CEvaluationNodeDelay() [1/3]

CEvaluationNodeDelay::CEvaluationNodeDelay ( )

private

Default constructor

References CEvaluationNode::mPrecedence, CEvaluationNode::mValueType, CEvaluationNode::Number, and PRECEDENCE_NUMBER.

Referenced by fromAST().

◆ CEvaluationNodeDelay() [2/3]

CEvaluationNodeDelay::CEvaluationNodeDelay	(	const SubType &	subType,
		const Data &	data
	)

constructor

Parameters

const	SubType & subType
const	Data & data

References CEvaluationNode::DELAY, fatalError, CEvaluationNode::mPrecedence, CEvaluationNode::mValue, CEvaluationNode::mValueType, CEvaluationNode::Number, PRECEDENCE_NUMBER, and CEvaluationNode::subType().

◆ CEvaluationNodeDelay() [3/3]

CEvaluationNodeDelay::CEvaluationNodeDelay ( const CEvaluationNodeDelay & src )

Copy constructor

Parameters

const CEvaluationNodeDelay & src

◆ ~CEvaluationNodeDelay()

CEvaluationNodeDelay::~CEvaluationNodeDelay ( )

virtual

Destructor

Member Function Documentation

◆ compile()

CIssue CEvaluationNodeDelay::compile ( )

overridevirtual

Compile a node;

Parameters

const CEvaluationTree * pTree

Returns: CIssue issue;

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CIssue::Error, CCopasiNode< std::string >::getChild(), CCopasiNode< _Data >::getSibling(), CEvaluationNode::getValuePointer(), mpDelayLagNode, mpDelayLagValue, mpDelayValueNode, mpDelayValueValue, CEvaluationNode::mSubType, CIssue::StructureInvalid, CIssue::Success, and CIssue::TooManyArguments.

Referenced by getInfix().

◆ fromAST()

CEvaluationNode * CEvaluationNodeDelay::fromAST	(	const ASTNode *	pASTNode,
		const std::vector< CEvaluationNode * > &	children
	)

static

Creates a new CEvaluationNodeCall from an ASTNode and the given children

Parameters

const	ASTNode* pNode
const	std::vector< CEvaluationNode * > & children

Returns: CEvaluationNode * pCretedNode

References CCopasiNode< _Data >::addChild(), CEvaluationNodeDelay(), CEvaluationNode::compile(), CEvaluationNode::DELAY, and CEvaluationNode::subType().

Referenced by CEvaluationTree::fromAST().

◆ getBerkeleyMadonnaString()

std::string CEvaluationNodeDelay::getBerkeleyMadonnaString ( const std::vector< std::string > & children ) const

overridevirtual

Retrieve the display string of the node and its eventual child nodes in Berkeley Madonna format.

Returns: const Data & value

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ getCCodeString()

std::string CEvaluationNodeDelay::getCCodeString ( const std::vector< std::string > & children ) const

overridevirtual

Retrieve the display string of the node and its eventual child nodes in C.

Returns: const Data & value

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ getDisplayString()

std::string CEvaluationNodeDelay::getDisplayString ( const std::vector< std::string > & children ) const

overridevirtual

Retrieve the display string of the node and its eventual child nodes.

Returns: const Data & value

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ getInfix()

std::string CEvaluationNodeDelay::getInfix ( const std::vector< std::string > & children ) const

overridevirtual

Retrieve the infix value of the node and its eventual child nodes.

Returns: const Data & value

Reimplemented from CEvaluationNode.

References compile(), CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ getMMLString()

std::string CEvaluationNodeDelay::getMMLString	(	const std::vector< std::string > &	children,
		bool	expand,
		const std::vector< std::vector< std::string > > &	variables
	)		const

overridevirtual

Build the MathML string

Parameters

const	std::vector< std::string > & children
bool	expand = true
const	std::vector< std::vector< std::string > > & variables

Returns: std::string MMLString

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ getUnit()

CValidatedUnit CEvaluationNodeDelay::getUnit	(	const CMathContainer &	container,
		const std::vector< CValidatedUnit > &	units
	)		const

overridevirtual

Figure out the appropriate CUnit to use, based on the child nodes. This sets the default, appropriate for many cases, as Dimensionless

Parameters

const	CMathContainer & container
const	std::vector< CValidatedUnit > & units

Returns: CValidatedUnit unit

Reimplemented from CEvaluationNode.

References CValidatedUnit::conflict(), CMathContainer::getModel(), CModel::getTimeUnit(), CValidatedUnit::merge(), and CValidatedUnit::setConflict().

◆ getXPPString()

std::string CEvaluationNodeDelay::getXPPString ( const std::vector< std::string > & children ) const

overridevirtual

Retrieve the display string of the node and its eventual child nodes in XPPAUT format.

Returns: const Data & value

Reimplemented from CEvaluationNode.

References CEvaluationNode::DELAY, CCopasiNode< std::string >::mData, and CEvaluationNode::mSubType.

◆ setUnit()

CValidatedUnit CEvaluationNodeDelay::setUnit	(	const CMathContainer &	container,
		const std::map< CEvaluationNode *, CValidatedUnit > &	currentUnits,
		std::map< CEvaluationNode *, CValidatedUnit > &	targetUnits
	)		const

overridevirtual

Set the unit for the node and return the resulting unit. The child node units are added to the map

Parameters

const	CMathContainer & container
const	std::map < CEvaluationNode * , CValidatedUnit > & currentUnits
std::map	< CEvaluationNode * , CValidatedUnit > & targetUnits

Returns: CValidatedUnit unit

Reimplemented from CEvaluationNode.

References CMathContainer::getModel(), CModel::getTimeUnit(), mpDelayLagNode, mpDelayValueNode, and CEvaluationNode::setUnit().

◆ toAST()

ASTNode * CEvaluationNodeDelay::toAST ( const CDataModel * pDataModel ) const

overridevirtual

Create a new ASTNode corresponding to this delay node.

Returns: ASTNode* return a pointer to the newly created node;

Reimplemented from CEvaluationNode.

References CCopasiNode< _Data >::addChild(), CCopasiNode< std::string >::getChild(), CCopasiNode< _Data >::getSibling(), and CEvaluationNode::toAST().

Member Data Documentation

◆ mpDelayLagNode

CEvaluationNode* CEvaluationNodeDelay::mpDelayLagNode

private

Referenced by compile(), and setUnit().

◆ mpDelayLagValue

const C_FLOAT64* CEvaluationNodeDelay::mpDelayLagValue

private

Referenced by compile().

◆ mpDelayValueNode

CEvaluationNode* CEvaluationNodeDelay::mpDelayValueNode

private

Referenced by compile(), and setUnit().

◆ mpDelayValueValue

const C_FLOAT64* CEvaluationNodeDelay::mpDelayValueValue

private

Referenced by compile().

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ CEvaluationNodeDelay() [1/3]

◆ CEvaluationNodeDelay() [2/3]

◆ CEvaluationNodeDelay() [3/3]

◆ ~CEvaluationNodeDelay()

Member Function Documentation

◆ compile()

◆ fromAST()

◆ getBerkeleyMadonnaString()

◆ getCCodeString()

◆ getDisplayString()

◆ getInfix()

◆ getMMLString()

◆ getUnit()

◆ getXPPString()

◆ setUnit()

◆ toAST()

Member Data Documentation

◆ mpDelayLagNode

◆ mpDelayLagValue

◆ mpDelayValueNode

◆ mpDelayValueValue