#include <CExperimentObjectMap.h>

Inheritance diagram for CExperimentObjectMap:

Collaboration diagram for CExperimentObjectMap:

Classes
class	CDataColumn

Public Member Functions
	CExperimentObjectMap (const std::string &name="Object Map", const CCopasiContainer *pParent=NULL)

	CExperimentObjectMap (const CExperimentObjectMap &src, const CCopasiContainer *pParent=NULL)

	CExperimentObjectMap (const CCopasiParameterGroup &group, const CCopasiContainer *pParent=NULL)

bool	compile (const std::vector< CCopasiContainer * > listOfContainer=CCopasiContainer::EmptyList)

virtual bool	elevateChildren ()

void	fixBuild55 ()

C_FLOAT64	getDefaultScale (const size_t &index) const

const size_t &	getLastColumn () const

size_t	getLastNotIgnoredColumn () const

const CVector< CCopasiObject * > &	getMappedObjects () const

virtual const std::string &	getName (const size_t &index) const

std::string	getObjectCN (const size_t &index) const

CExperiment::Type	getRole (const size_t &index) const

C_FLOAT64	getScale (const size_t &index) const

bool	setNumCols (const size_t &numCols)

bool	setObjectCN (const size_t &index, const std::string &objectCN)

bool	setRole (const size_t &index, const CExperiment::Type &role)

bool	setScale (const size_t &index, const C_FLOAT64 &scale)

virtual	~CExperimentObjectMap ()

Public Member Functions inherited from CCopasiParameterGroup
bool	addGroup (const std::string &name)

bool	addParameter (const CCopasiParameter &parameter)

bool	addParameter (const std::string &name, const CCopasiParameter::Type type)

template<class CType >
bool	addParameter (const std::string &name, const CCopasiParameter::Type type, const CType &value)

void	addParameter (CCopasiParameter *pParameter)

CCopasiParameterGroup *	assertGroup (const std::string &name)

template<class CType >
CCopasiParameter *	assertParameter (const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue)

index_iterator	beginIndex () const

name_iterator	beginName () const

	CCopasiParameterGroup (const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL)

	CCopasiParameterGroup (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup")

void	clear ()

index_iterator	endIndex () const

name_iterator	endName () const

CCopasiParameterGroup *	getGroup (const std::string &name)

const CCopasiParameterGroup *	getGroup (const std::string &name) const

CCopasiParameterGroup *	getGroup (const size_t &index)

const CCopasiParameterGroup *	getGroup (const size_t &index) const

size_t	getIndex (const std::string &name) const

std::string	getKey (const std::string &name) const

std::string	getKey (const size_t &index) const

virtual const CObjectInterface *	getObject (const CCopasiObjectName &cn) const

CCopasiParameter *	getParameter (const std::string &name)

const CCopasiParameter *	getParameter (const std::string &name) const

CCopasiParameter *	getParameter (const size_t &index)

const CCopasiParameter *	getParameter (const size_t &index) const

CCopasiParameter::Type	getType (const std::string &name) const

CCopasiParameter::Type	getType (const size_t &index) const

std::string	getUniqueParameterName (const CCopasiParameter *pParameter) const

const CCopasiParameter::Value &	getValue (const std::string &name) const

const CCopasiParameter::Value &	getValue (const size_t &index) const

CCopasiParameter::Value &	getValue (const std::string &name)

CCopasiParameter::Value &	getValue (const size_t &index)

CCopasiParameterGroup &	operator= (const CCopasiParameterGroup &rhs)

virtual void	print (std::ostream *ostream) const

bool	removeParameter (const std::string &name)

bool	removeParameter (const size_t &index)

template<class CType >
bool	setValue (const std::string &name, const CType &value)

template<class CType >
bool	setValue (const size_t &index, const CType &value)

size_t	size () const

bool	swap (const size_t &iFrom, const size_t &iTo)

bool	swap (index_iterator &from, index_iterator &to)

virtual	~CCopasiParameterGroup ()

Public Member Functions inherited from CCopasiParameter
	CCopasiParameter (const CCopasiParameter &src, const CCopasiContainer *pParent=NULL)

	CCopasiParameter (const std::string &name, const Type &type, const void pValue=NULL, const CCopasiContainer pParent=NULL, const std::string &objectType="Parameter")

virtual CCopasiObjectName	getCN () const

virtual const std::string &	getKey () const

virtual std::string	getObjectDisplayName (bool regular=true, bool richtext=false) const

const CCopasiParameter::Type &	getType () const

const Value &	getValue () const

Value &	getValue ()

virtual void *	getValuePointer () const

CCopasiObject *	getValueReference () const

bool	isValidValue (const C_FLOAT64 &value) const

bool	isValidValue (const C_INT32 &value) const

bool	isValidValue (const unsigned C_INT32 &value) const

bool	isValidValue (const bool &value) const

bool	isValidValue (const std::string &value) const

bool	isValidValue (const CCopasiObjectName &value) const

bool	isValidValue (const std::vector< CCopasiParameter * > &value) const

CCopasiParameter &	operator= (const CCopasiParameter &rhs)

template<class CType >
bool	setValue (const CType &value)

bool	setValue (const std::vector< CCopasiParameter * > &value)

virtual	~CCopasiParameter ()

Public Member Functions inherited from CCopasiContainer
virtual bool	add (CCopasiObject *pObject, const bool &adopt=true)

	CCopasiContainer (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)

	CCopasiContainer (const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)

virtual std::string	getChildObjectUnits (const CCopasiObject *pObject) const

virtual const objectMap &	getObjects () const

virtual std::string	getUnits () const

virtual const CCopasiObject *	getValueObject () const

virtual bool	remove (CCopasiObject *pObject)

virtual	~CCopasiContainer ()

Public Member Functions inherited from CCopasiObject
void	addDirectDependency (const CCopasiObject *pObject)

	CCopasiObject (const CCopasiObject &src, const CCopasiContainer *pParent=NULL)

void	clearDirectDependencies ()

void	clearRefresh ()

bool	dependsOn (DataObjectSet candidates, const DataObjectSet &context=DataObjectSet()) const

void	getAllDependencies (DataObjectSet &dependencies, const DataObjectSet &context) const

virtual const DataObjectSet &	getDirectDependencies (const DataObjectSet &context=DataObjectSet()) const

CCopasiContainer *	getObjectAncestor (const std::string &type) const

CCopasiDataModel *	getObjectDataModel ()

const CCopasiDataModel *	getObjectDataModel () const

const std::string &	getObjectName () const

CCopasiContainer *	getObjectParent () const

const std::string &	getObjectType () const

virtual const CObjectInterface::ObjectSet &	getPrerequisites () const

virtual Refresh *	getRefresh () const

UpdateMethod *	getUpdateMethod () const

bool	hasCircularDependencies (DataObjectSet &candidates, DataObjectSet &verified, const DataObjectSet &context) const

bool	hasUpdateMethod () const

bool	isArray () const

bool	isContainer () const

bool	isDataModel () const

bool	isMatrix () const

bool	isNameVector () const

bool	isNonUniqueName () const

virtual bool	isPrerequisiteForContext (const CObjectInterface *pObject, const CMath::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const

bool	isReference () const

bool	isRoot () const

bool	isSeparator () const

bool	isStaticString () const

bool	isValueBool () const

bool	isValueDbl () const

bool	isValueInt () const

bool	isValueInt64 () const

bool	isValueString () const

bool	isVector () const

virtual bool	mustBeDeleted (const DataObjectSet &deletedObjects) const

void	removeDirectDependency (const CCopasiObject *pObject)

void	setDirectDependencies (const DataObjectSet &directDependencies)

bool	setObjectName (const std::string &name)

virtual bool	setObjectParent (const CCopasiContainer *pParent)

void	setObjectValue (const C_FLOAT64 &value)

void	setObjectValue (const C_INT32 &value)

void	setObjectValue (const bool &value)

template<class CType >
void	setRefresh (CType pType, void(CType::method)(void))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const C_FLOAT64 &))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const C_INT32 &))

template<class CType >
void	setUpdateMethod (CType pType, void(CType::method)(const bool &))

virtual	~CCopasiObject ()

Public Member Functions inherited from CObjectInterface
	CObjectInterface ()

virtual	~CObjectInterface ()

Private Member Functions
void	initializeParameter ()

Private Attributes
size_t	mLastColumn

CVector< CCopasiObject * >	mObjects

Additional Inherited Members
Public Types inherited from CCopasiParameterGroup
typedef parameterGroup::iterator	index_iterator

typedef CCopasiContainer::objectMap::iterator	name_iterator

typedef std::vector < CCopasiParameter * >	parameterGroup

Public Types inherited from CCopasiParameter
enum	Type { DOUBLE = 0, UDOUBLE, INT, UINT, BOOL, GROUP, STRING, CN, KEY, FILE, EXPRESSION, INVALID }

Public Types inherited from CCopasiContainer
typedef std::multimap < std::string, CCopasiObject * >	objectMap

Public Types inherited from CCopasiObject
typedef std::set< const CCopasiObject * >	DataObjectSet

typedef std::vector< Refresh * >	DataUpdateSequence

Public Types inherited from CObjectInterface
typedef std::set< const CObjectInterface * >	ObjectSet

typedef std::vector < CObjectInterface * >	UpdateSequence

Static Public Member Functions inherited from CCopasiObject
static std::vector< Refresh * >	buildUpdateSequence (const DataObjectSet &objects, const DataObjectSet &uptoDateObjects, const DataObjectSet &context=DataObjectSet())

static void	setRenameHandler (CRenameHandler *rh)

Static Public Attributes inherited from CCopasiParameter
static const std::string	TypeName []

static const char *	XMLType []

Static Public Attributes inherited from CCopasiContainer
static const std::vector < CCopasiContainer * >	EmptyList

Protected Types inherited from CCopasiObject
enum	Flag { Container = 0x1, Vector = 0x2, Matrix = 0x4, NameVector = 0x8, Reference = 0x10, ValueBool = 0x20, ValueInt = 0x40, ValueInt64 = 0x80, ValueDbl = 0x100, NonUniqueName = 0x200, StaticString = 0x400, ValueString = 0x800, Separator = 0x1000, ModelEntity = 0x2000, Array = 0x4000, DataModel = 0x8000, Root = 0x10000, Gui = 0x20000 }

Protected Member Functions inherited from CCopasiParameterGroup
	CCopasiParameterGroup ()

Protected Member Functions inherited from CCopasiContainer
template<class CType >
CCopasiObject *	addMatrixReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

template<class CType >
CCopasiObject *	addObjectReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

template<class CType >
CCopasiObject *	addVectorReference (const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)

void	initObjects ()

Protected Member Functions inherited from CCopasiObject
	CCopasiObject ()

	CCopasiObject (const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)

Protected Attributes inherited from CCopasiParameter
std::string	mKey

CCopasiObject *	mpValueReference

size_t	mSize

Value	mValue

Protected Attributes inherited from CCopasiContainer
objectMap	mObjects

Static Protected Attributes inherited from CCopasiObject
static CRenameHandler *	smpRenameHandler = NULL

Detailed Description

Definition at line 23 of file CExperimentObjectMap.h.

Constructor & Destructor Documentation

CExperimentObjectMap::CExperimentObjectMap	(	const std::string &	name = `"Object Map"`,
		const CCopasiContainer *	pParent = `NULL`
	)

Default constructor

Parameters

const	std::string & name (default: Object Map)
const	CCopasiContainer * pParent (default: NULL)

Definition at line 27 of file CExperimentObjectMap.cpp.

References initializeParameter().

                                      :
   CCopasiParameterGroup(name, pParent),
   mObjects(0),
   mLastColumn(0)
 {initializeParameter();}

CExperimentObjectMap::CExperimentObjectMap	(	const CExperimentObjectMap &	src,
		const CCopasiContainer *	pParent = `NULL`
	)

Copy constructor

Parameters

const	CExperimentObjectMap & src
const	CCopasiContainer * pParent (default: NULL)

Definition at line 34 of file CExperimentObjectMap.cpp.

References initializeParameter().

                                      :
   CCopasiParameterGroup(src, pParent),
   mObjects(src.mObjects),
   mLastColumn(src.mLastColumn)
 {initializeParameter();}

CExperimentObjectMap::CExperimentObjectMap	(	const CCopasiParameterGroup &	group,
		const CCopasiContainer *	pParent = `NULL`
	)

Specific constructor used for reading copasi files

Parameters

const	CCopasiParameterGroup & group
const	CCopasiContainer * pParent (default: NULL)

Definition at line 41 of file CExperimentObjectMap.cpp.

References initializeParameter().

                                      :
   CCopasiParameterGroup(group, pParent),
   mObjects(0),
   mLastColumn(0)
 {initializeParameter();}

CExperimentObjectMap::~CExperimentObjectMap ( )

virtual

Destructor

Definition at line 48 of file CExperimentObjectMap.cpp.

48 {}

Member Function Documentation

bool CExperimentObjectMap::compile ( const std::vector< CCopasiContainer * > listOfContainer = CCopasiContainer::EmptyList )

Compile the map. This function must be called before any operations can be performed.

Parameters

const std::vector< CCopasiContainer * > listOfContainer

Returns: bool success

Definition at line 222 of file CExperimentObjectMap.cpp.

References C_INVALID_INDEX, CCopasiParameter::CN, getName(), getObjectCN(), CCopasiObject::getObjectDataModel(), CCopasiObject::isValueDbl(), mLastColumn, mObjects, CVector< CType >::resize(), and CCopasiParameterGroup::size().

Referenced by CExperiment::compile().

 {
   size_t i, imax = size();
   size_t Column;
 
   // We need to find out the size of the object map
   if (imax == 0)
     mLastColumn = C_INVALID_INDEX;
   else
     {
       mLastColumn = strtoul(getName(0).c_str(), NULL, 0);
 
       for (i = 1; i < imax; i++)
         {
           Column = strtoul(getName(i).c_str(), NULL, 0);
 
           if (mLastColumn < Column)
             mLastColumn = Column;
         }
     }
 
   mObjects.resize(mLastColumn + 1);
   mObjects = NULL;
 
   CCopasiObject * pObject = NULL;
   std::string CN;
 
   for (i = 0; i < imax; i++)
     {
       if ((CN = getObjectCN(i)) == "") continue;
 
       if ((pObject =
              getObjectDataModel()->ObjectFromName(listOfContainer, CN)) != NULL &&
           pObject->isValueDbl())
         {
           Column = strtoul(getName(i).c_str(), NULL, 0);
           mObjects[Column] = pObject;
         }
       else
         return false;
     }
 
   return true;
 }

bool CExperimentObjectMap::elevateChildren ( )

virtual

This methods must be called to elevate subgroups to derived objects. The default implementation does nothing.

Returns: bool success

Reimplemented from CCopasiParameterGroup.

Definition at line 55 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::assertGroup(), CCopasiParameterGroup::assertParameter(), CCopasiParameterGroup::clear(), CCopasiParameter::CN, CCopasiObject::getObjectName(), CCopasiParameter::mValue, and CCopasiParameter::Value::pGROUP.

Referenced by CExperimentObjectMap::CDataColumn::initializeParameter(), and initializeParameter().

 {
   bool success = true;
 
   std::vector<CCopasiParameter *>::iterator itColumn = mValue.pGROUP->begin();
   std::vector<CCopasiParameter *>::iterator endColumn = mValue.pGROUP->end();
 
   if (itColumn != endColumn &&
       dynamic_cast< CCopasiParameterGroup * >(*itColumn) == NULL) // We have an old data format.
     {
       CCopasiParameterGroup New(getObjectName());
 
       for (; itColumn != endColumn; ++itColumn)
         {
           CCopasiParameterGroup * pGroup = New.assertGroup((*itColumn)->getObjectName());
           pGroup->assertParameter("Object CN", CCopasiParameter::CN, *(*itColumn)->getValue().pCN);
         }
 
       clear();
       *this = New;
     }
 
   for (itColumn = mValue.pGROUP->begin(); itColumn != endColumn; ++itColumn)
     if (((*itColumn) = elevate<CDataColumn, CCopasiParameterGroup>(*itColumn)) == NULL)
       success = false;
 
   return success;
 }

void CExperimentObjectMap::fixBuild55 ( )

Fix files written with Version 4.10.55, which wrote the square root of user defined weights for the parameter fitting task

Definition at line 273 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::beginIndex(), CCopasiParameterGroup::endIndex(), and CExperimentObjectMap::CDataColumn::fixBuild55().

Referenced by CExperiment::fixBuild55().

 {
   CCopasiParameterGroup::index_iterator it = beginIndex();
   CCopasiParameterGroup::index_iterator end = endIndex();
 
   for (; it != end; ++it)
     {
       CDataColumn * pColumn = dynamic_cast< CDataColumn * >(*it);
 
       if (pColumn != NULL)
         {
           pColumn->fixBuild55();
         }
     }
 }

C_FLOAT64 CExperimentObjectMap::getDefaultScale ( const size_t & index ) const

Retrieve the default scaling factor according to the selected weight method of the indexed column

Parameters

const size_t & index

Returns: C_FLOAT64 defaultScale

Definition at line 211 of file CExperimentObjectMap.cpp.

References CExperimentObjectMap::CDataColumn::getDefaultScale(), CCopasiParameterGroup::getGroup(), and StringPrint().

Referenced by CExperimentObjectMap::CDataColumn::getScale(), CQExperimentData::loadTable(), CExperimentObjectMap::CDataColumn::setScale(), and CQExperimentData::updateScales().

 {
   const CDataColumn * pColumn =
     dynamic_cast< const CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->getDefaultScale();
   else
     return std::numeric_limits<C_FLOAT64>::quiet_NaN();
 }

const size_t & CExperimentObjectMap::getLastColumn ( ) const

Retrieve the last mapped column number

Returns: const size_t & lastColumn

Definition at line 270 of file CExperimentObjectMap.cpp.

References mLastColumn.

Referenced by CExperiment::compile().

271 {return mLastColumn;}

CExperimentObjectMap::mLastColumn

size_t mLastColumn

Definition: CExperimentObjectMap.h:299

size_t CExperimentObjectMap::getLastNotIgnoredColumn ( ) const

Retrieve the last non ignored column

Returns: size_t lastNotIgnoredColumn

Definition at line 110 of file CExperimentObjectMap.cpp.

References C_INT32, CExperiment::ignore, CCopasiParameter::mValue, and CCopasiParameter::Value::pGROUP.

Referenced by CExperiment::compile(), and CExperiment::printResult().

 {
   std::vector<CCopasiParameter *>::iterator itColumn = mValue.pGROUP->begin();
   std::vector<CCopasiParameter *>::iterator endColumn = mValue.pGROUP->end();
 
   C_INT32 LastNotIgnored = -1;
 
   for (; itColumn != endColumn; ++itColumn)
     if (static_cast< CDataColumn * >(*itColumn)->getRole() != CExperiment::ignore)
       {
         C_INT32 index = strtol(static_cast< CDataColumn * >(*itColumn)->getObjectName().c_str(), NULL, 10);
 
         if (index > LastNotIgnored) LastNotIgnored = index;
       }
 
   return LastNotIgnored;
 }

const CVector< CCopasiObject * > & CExperimentObjectMap::getMappedObjects ( ) const

Retrieve the vector of mapped objects

Returns: const CVector< CCopasiObject * > & mappedObjects

Definition at line 267 of file CExperimentObjectMap.cpp.

References mObjects.

Referenced by CExperiment::compile(), and CExperiment::printResult().

268 {return mObjects;}

CExperimentObjectMap::mObjects

CVector< CCopasiObject * > mObjects

Definition: CExperimentObjectMap.h:294

const std::string & CExperimentObjectMap::getName ( const size_t & index ) const

virtual

Retrieve the name of a parameter or subgroup

Parameters

const size_t & index

Returns: std::string name

Reimplemented from CCopasiParameterGroup.

Definition at line 129 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CCopasiObject::getObjectName(), and StringPrint().

Referenced by compile().

 {
   static const std::string NoName("");
 
   const CDataColumn * pColumn =
     dynamic_cast< const CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->getObjectName();
   else
     return NoName;
 }

std::string CExperimentObjectMap::getObjectCN ( const size_t & index ) const

Retrieve the object CN of the object mapped to the indexed column

Parameters

const size_t & index

Returns: std::stringobjctCN

Definition at line 177 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::getObjectCN(), and StringPrint().

Referenced by compile(), CExperiment::elevateChildren(), CQExperimentData::loadTable(), CQExperimentData::saveTable(), and CExperiment::updateFittedPoints().

 {
   const CDataColumn * pColumn =
     dynamic_cast< const CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->getObjectCN();
   else
     return "";
 }

CExperiment::Type CExperimentObjectMap::getRole ( const size_t & index ) const

Retrieve the role of the indexed column

Parameters

const size_t & index

Returns: CExperiment::Type role

Definition at line 154 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::getRole(), CExperiment::ignore, and StringPrint().

Referenced by CExperiment::compile(), CQExperimentData::loadTable(), CExperiment::printResult(), CExperiment::read(), CQExperimentData::saveTable(), CExperiment::updateFittedPoints(), and CQExperimentData::updateScales().

 {
   const CDataColumn * pColumn =
     dynamic_cast< const CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->getRole();
   else
     return CExperiment::ignore;
 }

C_FLOAT64 CExperimentObjectMap::getScale ( const size_t & index ) const

Retrieve the scaling factor of the indexed column

Parameters

const size_t & index

Returns: C_FLOAT64 scale

Definition at line 200 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::getScale(), and StringPrint().

Referenced by CExperiment::compile(), CQExperimentData::loadTable(), and CQExperimentData::saveTable().

 {
   const CDataColumn * pColumn =
     dynamic_cast< const CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->getScale();
   else
     return std::numeric_limits<C_FLOAT64>::quiet_NaN();
 }

void CExperimentObjectMap::initializeParameter ( )

private

Allocates all group parameters and assures that they are properly initialized.

Definition at line 50 of file CExperimentObjectMap.cpp.

References elevateChildren().

Referenced by CExperimentObjectMap().

 {
   elevateChildren();
 }

bool CExperimentObjectMap::setNumCols ( const size_t & numCols )

Set the number of data columns

Parameters

const size_t & numCols

Returns: bool success

Definition at line 84 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::assertGroup(), CCopasiParameter::mValue, CCopasiParameter::Value::pGROUP, and StringPrint().

Referenced by CExperiment::elevateChildren(), and CQExperimentData::saveTable().

 {
   if (numCols == mValue.pGROUP->size())
     return true;
 
   // We only clear the vector of parameter. We do not destroy the parameter they are still
   // accessible through CCopasiContainer::mObjects and thus will be automatically destroyed.
   mValue.pGROUP->clear();
 
   bool success = true;
 
   for (size_t col = 0; col < numCols; col++)
     {
       CCopasiParameterGroup * pGrp = assertGroup(StringPrint("%d", col));
 
       // assertGroup() adds only newly created groups to mValue.pGROUP. We need to add the existing
       // ones.
       if (mValue.pGROUP->size() < col + 1)
         mValue.pGROUP->push_back(pGrp);
 
       success &= (elevate<CDataColumn, CCopasiParameterGroup>(pGrp) != NULL);
     }
 
   return success;
 }

bool CExperimentObjectMap::setObjectCN	(	const size_t &	index,
		const std::string &	objectCN
	)

Set the object CN of the object mapped to the indexed column

Parameters

const	size_t & index
const	std::string & objectCN

Returns: bool success

Definition at line 165 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::setObjectCN(), and StringPrint().

Referenced by CExperiment::elevateChildren(), CExperimentObjectMap::CDataColumn::operator=(), and CQExperimentData::saveTable().

 {
   CDataColumn * pColumn =
     dynamic_cast< CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->setObjectCN((CCopasiObjectName) CN);
   else
     return false;
 }

bool CExperimentObjectMap::setRole	(	const size_t &	index,
		const CExperiment::Type &	role
	)

Set the role of the indexed column

Parameters

const	size_t & index
const	CExperiment::Type & role

Returns: bool success

Definition at line 142 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::setRole(), and StringPrint().

Referenced by CExperiment::elevateChildren(), CQExperimentData::loadTable(), CQExperimentData::saveTable(), and CQExperimentData::slotExprimentType().

 {
   CDataColumn * pColumn =
     dynamic_cast< CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->setRole(role);
   else
     return false;
 }

bool CExperimentObjectMap::setScale	(	const size_t &	index,
		const C_FLOAT64 &	scale
	)

Set the scaling factor for the indexed column

Parameters

const	size_t & index
const	C_FLOAT64 & scale

Returns: bool success

Definition at line 188 of file CExperimentObjectMap.cpp.

References CCopasiParameterGroup::getGroup(), CExperimentObjectMap::CDataColumn::setScale(), and StringPrint().

Referenced by CExperimentObjectMap::CDataColumn::operator=(), CQExperimentData::saveTable(), and CExperiment::setWeightMethod().

 {
   CDataColumn * pColumn =
     dynamic_cast< CDataColumn * >(getGroup(StringPrint("%d", index)));
 
   if (pColumn)
     return pColumn->setScale(weight);
   else
     return false;
 }

Member Data Documentation

size_t CExperimentObjectMap::mLastColumn

private

The last mapped column

Definition at line 299 of file CExperimentObjectMap.h.

Referenced by compile(), and getLastColumn().

CVector<CCopasiObject *> CExperimentObjectMap::mObjects

private

A vector of pointer to the objects corresponding to the data column.

Definition at line 294 of file CExperimentObjectMap.h.

Referenced by compile(), and getMappedObjects().

The documentation for this class was generated from the following files:

Classes

Public Member Functions

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation