#include <CFitItem.h>

Inheritance diagram for CFitItem:

Public Member Functions
bool	addCrossValidation (const std::string &key)

bool	addExperiment (const std::string &key)

	CFitItem (const CCopasiParameterGroup &group, const CDataContainer *pParent)

	CFitItem (const CDataContainer *pParent, const std::string &name="FitItem")

	CFitItem (const CFitItem &src, const CDataContainer *pParent)

virtual C_INT32	checkConstraint () const override

virtual bool	compile (CObjectInterface::ContainerList listOfContainer=CDataContainer::EmptyList) override

virtual bool	elevateChildren () override

virtual C_FLOAT64	getConstraintViolation () const override

const std::string &	getCrossValidation (const size_t &index) const

size_t	getCrossValidationCount () const

std::string	getCrossValidations () const

const std::string &	getExperiment (const size_t &index) const

size_t	getExperimentCount () const

std::string	getExperiments () const

const C_FLOAT64 &	getLocalValue () const

virtual const C_FLOAT64 *	getObjectValue () const override

virtual bool	isValid () const override

bool	removeCrossValidation (const size_t &index)

bool	removeExperiment (const size_t &index)

void	setLocalValue (const C_FLOAT64 &value)

bool	updateBounds (const std::vector< COptItem * > &items)

virtual	~CFitItem ()

Public Member Functions inherited from COptItem
void	addDependentItem (COptItem *pDependentItem)

virtual void	calculateValue () override

C_INT32	checkConstraint (const C_FLOAT64 &value) const

bool	checkInterval () const

bool	checkIsInitialValue () const

bool	checkLowerBound (const C_FLOAT64 &value) const

bool	checkUpperBound (const C_FLOAT64 &value) const

	COptItem (const CCopasiParameterGroup &group, const CDataContainer *pParent)

	COptItem (const CDataContainer *pParent, const std::string &name="OptimizationItem")

	COptItem (const COptItem &src, const CDataContainer *pParent)

const std::set< COptItem * > &	getDependentItems () const

const CCore::CUpdateSequence &	getIntervalUpdateSequence () const

const C_FLOAT64 &	getLastStartValue () const

const std::string	getLowerBound () const

const C_FLOAT64 *	getLowerBoundValue () const

const CObjectInterface *	getObject () const

const CCommonName	getObjectCN () const

std::string	getObjectDisplayName () const override

C_FLOAT64	getRandomValue (CRandom &Random) const

const C_FLOAT64 &	getStartValue () const

const std::string	getUpperBound () const

const C_FLOAT64 *	getUpperBoundValue () const

virtual void *	getValuePointer () const override

bool	influencesIntervals () const

void	rememberStartValue ()

void	setIntervalUpdateSequence (const CCore::CUpdateSequence &updateSequence)

bool	setLowerBound (const CCommonName &lowerBound)

bool	setObjectCN (const CCommonName &objectCN)

bool	setStartValue (const C_FLOAT64 &value)

bool	setUpperBound (const CCommonName &upperBound)

void	updatePrerequisites (const std::vector< COptItem * > &influencingIntervals)

virtual	~COptItem ()

Public Member Functions inherited from CCopasiParameterGroup
bool	addGroup (const std::string &name)

void	addParameter (CCopasiParameter *pParameter)

bool	addParameter (const CCopasiParameter &parameter)

bool	addParameter (const std::string &name, const CCopasiParameter::Type type, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)

template<class CType >
bool	addParameter (const std::string &name, const CCopasiParameter::Type type, const CType &value, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)

virtual bool	applyData (const CData &data, CUndoData::CChangeSet &changes)

CCopasiParameterGroup *	assertGroup (const std::string &name, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)

template<class CType >
CType *	assertParameter (const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)

index_iterator	beginIndex () const

const_name_iterator	beginName () const

	CCopasiParameterGroup (const CCopasiParameterGroup &src, const CDataContainer *pParent=NULL)

	CCopasiParameterGroup (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="ParameterGroup")

void	clear ()

virtual void	createUndoData (CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const

index_iterator	endIndex () const

const_name_iterator	endName () const

CCopasiParameterGroup &	getElementTemplates ()

const CCopasiParameterGroup &	getElementTemplates () const

CCopasiParameterGroup *	getGroup (const size_t &index)

const CCopasiParameterGroup *	getGroup (const size_t &index) const

CCopasiParameterGroup *	getGroup (const std::string &name)

const CCopasiParameterGroup *	getGroup (const std::string &name) const

virtual size_t	getIndex (const CDataObject *pObject) const

size_t	getIndex (const std::string &name) const

std::string	getKey (const size_t &index) const

std::string	getKey (const std::string &name) const

virtual const std::string &	getName (const size_t &index) const

virtual const CObjectInterface *	getObject (const CCommonName &cn) const

CCopasiParameter *	getParameter (const size_t &index)

const CCopasiParameter *	getParameter (const size_t &index) const

CCopasiParameter *	getParameter (std::string name)

const CCopasiParameter *	getParameter (std::string name) const

CCopasiParameter::Type	getType (const size_t &index) const

CCopasiParameter::Type	getType (const std::string &name) const

std::string	getUniqueParameterName (const CCopasiParameter *pParameter) const

template<class CType >
CType &	getValue (const size_t &index)

template<class CType >
const CType &	getValue (const size_t &index) const

template<class CType >
CType &	getValue (const std::string &name)

template<class CType >
const CType &	getValue (const std::string &name) const

bool	haveTemplate () const

virtual CUndoObjectInterface *	insert (const CData &data)

CCopasiParameterGroup &	operator= (const CCopasiParameterGroup &rhs)

virtual void	print (std::ostream *ostream) const

virtual bool	remove (CDataObject *pObject)

bool	removeParameter (CCopasiParameter *pParameter)

bool	removeParameter (const size_t &index)

bool	removeParameter (const std::string &name)

virtual void	setUserInterfaceFlag (const UserInterfaceFlag &flag)

template<class CType >
bool	setValue (const size_t &index, const CType &value)

template<class CType >
bool	setValue (const std::string &name, const CType &value)

size_t	size (const UserInterfaceFlag &require=UserInterfaceFlag::None, const UserInterfaceFlag &exclude=UserInterfaceFlag::None) const

bool	swap (const size_t &iFrom, const size_t &iTo)

bool	swap (index_iterator &from, index_iterator &to)

virtual CData	toData () const

virtual void	updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject)

virtual	~CCopasiParameterGroup ()

Public Member Functions inherited from CCopasiParameter
	CCopasiParameter (const CCopasiParameter &src, const CDataContainer *pParent)

	CCopasiParameter (const std::string &name, const Type &type, const void pValue=NULL, const CDataContainer pParent=NO_PARENT, const std::string &objectType="Parameter")

virtual CCommonName	getCN () const override

template<class CType >
const CType &	getDefault () const

virtual const std::string &	getKey () const override

const CCopasiParameter::Type &	getType () const

const UserInterfaceFlag &	getUserInterfaceFlag () const

template<class CType >
std::vector< std::pair< CType, CType > > &	getValidValues ()

template<class CType >
const std::vector< std::pair< CType, CType > > &	getValidValues () const

void *	getValidValuesPointer () const

template<class CType >
CType &	getValue ()

template<class CType >
const CType &	getValue () const

CDataObject *	getValueReference () const

bool	hasValidValues () const

bool	isBasic () const

bool	isDefault () const

bool	isEditable () const

bool	isUnsupported () const

bool	isValidValue (const bool &value) const

bool	isValidValue (const C_FLOAT64 &value) const

bool	isValidValue (const C_INT32 &value) const

bool	isValidValue (const CCommonName &value) const

template<class CType >
bool	isValidValue (const CType &) const

bool	isValidValue (const std::string &value) const

bool	isValidValue (const std::vector< CCopasiParameter * > &value) const

bool	isValidValue (const unsigned C_INT32 &value) const

CCopasiParameter &	operator= (const CCopasiParameter &rhs)

template<class CType >
bool	setDefault (const CType &defaultValue)

bool	setDefault (const std::vector< CCopasiParameter * > &defaultValue)

virtual bool	setObjectParent (const CDataContainer *pParent) override

template<class CType , class Enum >
bool	setValidValues (const CEnumAnnotation< CType, Enum > &validValues)

template<class CType >
bool	setValidValues (const std::vector< std::pair< CType, CType > > &validValues)

template<class CType >
bool	setValue (const CType &value)

bool	setValue (const std::vector< CCopasiParameter * > &value)

virtual	~CCopasiParameter ()

Public Member Functions inherited from CDataContainer
virtual bool	add (CDataObject *pObject, const bool &adopt=true)

virtual bool	appendDeletedDependentData (CUndoData &undoData) const

	CDataContainer (const CDataContainer &src, const CDataContainer *pParent)

	CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)

virtual std::string	getChildObjectUnits (const CDataObject *pObject) const

void	getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const

virtual objectMap &	getObjects ()

virtual const objectMap &	getObjects () const

virtual const std::string	getUnits () const override

virtual const CDataObject *	getValueObject () const override

void	objectRenamed (CDataObject *pObject, const std::string &oldName)

virtual	~CDataContainer ()

Public Member Functions inherited from CDataObject
void	addIssue (const CIssue &issue)

void	addReference (const CDataContainer *pReference)

	CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL)

virtual void	destruct () override

virtual const CDataObject *	getDataObject () const override

CDataContainer *	getObjectAncestor (const std::string &type) const

CDataModel *	getObjectDataModel () const

const CObjectInterface *	getObjectFromCN (const CCommonName &cn) const

const std::string &	getObjectName () const

CDataContainer *	getObjectParent () const

const std::string &	getObjectType () const

virtual const CObjectInterface::ObjectSet &	getPrerequisites () const override

virtual const CValidity &	getValidity () const override

bool	hasFlag (const Flag &flag) const

virtual bool	isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override

bool	prerequisitsContains (const DataObjectSet &objects) const

void	removeIssue (const CIssue &issue)

void	removeReference (const CDataContainer *pReference)

bool	setObjectName (const std::string &name)

void	validityChanged (const CValidity &changedValidity) override

void	validityRemoved (const CValidity &changedValidity)

virtual	~CDataObject ()

Public Member Functions inherited from CObjectInterface
	CObjectInterface ()

	CObjectInterface (const CObjectInterface &src)

virtual	~CObjectInterface ()

Public Member Functions inherited from CUndoObjectInterface
	CUndoObjectInterface ()

	CUndoObjectInterface (const CUndoObjectInterface &src)

bool	generateUuid ()

const xg::Guid &	getUuid () const

bool	setUuid (const std::string &uuid)

bool	setUuid (const xg::Guid &uuid)

virtual	~CUndoObjectInterface ()

Static Public Member Functions
static bool	isValid (CCopasiParameterGroup &group)

Static Public Member Functions inherited from COptItem
static bool	isValid (CCopasiParameterGroup &group)

Static Public Member Functions inherited from CCopasiParameter
static void	allocateValidValues (const Type &type, void *&pValidValues)

static void	allocateValue (const Type &type, void *&pValue)

static void	assignValue (const Type &type, void &pValue, const void pNewValue)

static void	deleteValidValues (const Type &type, void *&pValidValues)

static void	deleteValue (const Type &type, void *&pValue)

static CCopasiParameter *	fromData (const CData &data, CUndoObjectInterface *pParent)

Static Public Member Functions inherited from CDataContainer
static CDataContainer *	fromData (const CData &data, CUndoObjectInterface *pParent)

Static Public Member Functions inherited from CDataObject
static CDataObject *	fromData (const CData &data, CUndoObjectInterface *pParent)

static void	sanitizeObjectName (std::string &name)

Static Public Member Functions inherited from CObjectInterface
static const CDataObject *	DataObject (const CObjectInterface *pInterface)

static CObjectInterface *	GetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName)

Static Public Member Functions inherited from CUndoObjectInterface
template<class CType >
static CType *	fromData (const CData &, CUndoObjectInterface *)

Protected Member Functions
	CFitItem ()

	CFitItem (const CFitItem &src)

Protected Member Functions inherited from COptItem
	COptItem ()

	COptItem (const COptItem &src)

Protected Member Functions inherited from CCopasiParameterGroup
	CCopasiParameterGroup ()

Protected Member Functions inherited from CCopasiParameter
	CCopasiParameter (const CCopasiParameter &src)

Protected Member Functions inherited from CDataContainer
template<class CType >
CDataMatrixReference< CType > *	addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

template<class CType >
CDataObjectReference< CType > *	addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

template<class CType >
CDataVectorReference< CType > *	addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

	CDataContainer (const CDataContainer &src)

void	initObjects ()

Protected Member Functions inherited from CDataObject
	CDataObject ()

	CDataObject (const std::string &name, const CDataContainer pParent=static_cast< CDataContainer >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)

Protected Attributes
C_FLOAT64	mLocalValue

CCopasiParameterGroup *	mpGrpAffectedCrossValidations

CCopasiParameterGroup *	mpGrpAffectedExperiments

Protected Attributes inherited from COptItem
std::set< COptItem * >	mDependentItems

C_FLOAT64	mInterval

C_FLOAT64	mLastStartValue

C_FLOAT64	mLowerBound

const C_FLOAT64 *	mpLowerBound

const CObjectInterface *	mpLowerObject

const CObjectInterface *	mpObject

const C_FLOAT64 *	mpObjectValue

std::string *	mpParmLowerBound

std::string *	mpParmObjectCN

C_FLOAT64 *	mpParmStartValue

std::string *	mpParmUpperBound

const C_FLOAT64 *	mpUpperBound

const CObjectInterface *	mpUpperObject

CCore::CUpdateSequence	mUpdateInterval

C_FLOAT64	mUpperBound

Protected Attributes inherited from CCopasiParameter
std::string	mKey

void *	mpDefault

void *	mpValidValues

void *	mpValue

CDataObject *	mpValueReference

UserInterfaceFlag	mUserInterfaceFlag

Protected Attributes inherited from CDataContainer
objectMap	mObjects

Protected Attributes inherited from CDataObject
ObjectSet	mPrerequisits

std::set< CDataContainer * >	mReferences

Protected Attributes inherited from CObjectInterface
CValidity	mValidity

Private Member Functions
void	initializeParameter ()

Friends
class	CFitProblem

std::ostream &	operator<< (std::ostream &os, const CFitItem &o)

Additional Inherited Members
Public Types inherited from CCopasiParameterGroup
typedef CDataObjectMap::const_type_iterator< CCopasiParameter >	const_name_iterator

typedef std::vector< CCopasiParameter * >	elements

typedef elements::iterator	index_iterator

typedef CDataObjectMap::type_iterator< CCopasiParameter >	name_iterator

Public Types inherited from CCopasiParameter
enum class	eUserInterfaceFlag { editable , basic , unsupported , __SIZE }

enum class	Type { DOUBLE = 0 , UDOUBLE , INT , UINT , BOOL , GROUP , STRING , CN , KEY , FILE , EXPRESSION , INVALID , __SIZE }

typedef CFlags< eUserInterfaceFlag >	UserInterfaceFlag

Public Types inherited from CDataContainer
typedef CDataObjectMap	objectMap

Public Types inherited from CDataObject
typedef std::set< const CDataObject * >	DataObjectSet

enum	Flag { Container , Vector , Matrix , NameVector , Reference , ValueBool , ValueInt , ValueInt64 , ValueDbl , NonUniqueName , StaticString , ValueString , Separator , DisplayName , ModelEntity , Array , DataModel , Root , Gui , __SIZE }

Public Types inherited from CObjectInterface
typedef std::vector< const CDataContainer * >	ContainerList

typedef std::set< const CObjectInterface * >	ObjectSet

Static Public Attributes inherited from CCopasiParameter
static const CEnumAnnotation< std::string, Type >	TypeName

static const CEnumAnnotation< std::string, Type >	XMLType

Static Public Attributes inherited from CDataContainer
static const CObjectInterface::ContainerList	EmptyList

Constructor & Destructor Documentation

◆ CFitItem() [1/5]

CFitItem::CFitItem ( )

protected

Default constructor

◆ CFitItem() [2/5]

CFitItem::CFitItem ( const CFitItem & src )

protected

◆ CFitItem() [3/5]

CFitItem::CFitItem	(	const CDataContainer *	pParent,
		const std::string &	name = `"FitItem"`
	)

Specific constructor

Parameters

const	CDataContainer * pParent (default: NULL)
const	std::string & name (default: FitItem)

References initializeParameter().

◆ CFitItem() [4/5]

CFitItem::CFitItem	(	const CFitItem &	src,
		const CDataContainer *	pParent
	)

Copy constructor

Parameters

const	CFitItem & src
const	CDataContainer * pParent (default: src data model)

References initializeParameter().

◆ CFitItem() [5/5]

CFitItem::CFitItem	(	const CCopasiParameterGroup &	group,
		const CDataContainer *	pParent
	)

Specific constructor used for reading COPASI files

Parameters

const	CCopasiParameterGroup & group
const	CDataContainer * pParent (default: group data model)

References initializeParameter().

◆ ~CFitItem()

CFitItem::~CFitItem ( )

virtual

Destructor

Member Function Documentation

◆ addCrossValidation()

bool CFitItem::addCrossValidation ( const std::string & key )

Add an experiment to the list of affected cross validations.

Parameters

const std::string & key

Returns: bool success

References CCopasiParameterGroup::addParameter(), CCopasiParameterGroup::getValue(), CCopasiParameter::KEY, mpGrpAffectedCrossValidations, and CCopasiParameterGroup::size().

◆ addExperiment()

bool CFitItem::addExperiment ( const std::string & key )

Add an experiment to the list of affected experiments.

Parameters

const std::string & key

Returns: bool success

References CCopasiParameterGroup::addParameter(), CCopasiParameterGroup::getValue(), CCopasiParameter::KEY, mpGrpAffectedExperiments, and CCopasiParameterGroup::size().

◆ checkConstraint()

C_INT32 CFitItem::checkConstraint ( ) const

overridevirtual

This functions check whether the current value is within the limits of the optimization item.

Returns: C_INT32 result (-1: to small, 0: within boundaries, 1 to large)

Reimplemented from COptItem.

Reimplemented in CFitConstraint.

References mLocalValue, COptItem::mpLowerBound, and COptItem::mpUpperBound.

Referenced by getConstraintViolation().

◆ compile()

bool CFitItem::compile ( CObjectInterface::ContainerList listOfContainer = CDataContainer::EmptyList )

overridevirtual

Compile the optimization item. This function must be called before any of the check functions are called.

Parameters

const CObjectInterface::ContainerList listOfContainer

Returns: bool success

Reimplemented from COptItem.

References COptItem::compile(), mLocalValue, and COptItem::mpParmStartValue.

◆ elevateChildren()

bool CFitItem::elevateChildren ( )

overridevirtual

This methods must be called to elevate subgroups to derived objects. The default implementation does nothing.

Returns: bool success

Reimplemented from CCopasiParameterGroup.

References C_FLOAT64, CCopasiParameterGroup::getParameter(), CCopasiParameter::getValue(), mpGrpAffectedCrossValidations, mpGrpAffectedExperiments, CCopasiParameterGroup::removeParameter(), and COptItem::setStartValue().

Referenced by initializeParameter().

◆ getConstraintViolation()

C_FLOAT64 CFitItem::getConstraintViolation ( ) const

overridevirtual

Retrieve the magnitude of the constraint violation This is always a positive number

Returns: C_FLOAT64 constraintViolation;

Reimplemented from COptItem.

Reimplemented in CFitConstraint.

References checkConstraint(), mLocalValue, COptItem::mpLowerBound, and COptItem::mpUpperBound.

◆ getCrossValidation()

const std::string & CFitItem::getCrossValidation ( const size_t & index ) const

Retrieve the key of the indexed experiment.

Parameters

const size_t & index

Returns: const std::string & key

References CCopasiParameterGroup::getValue(), mpGrpAffectedCrossValidations, and CCopasiParameterGroup::size().

Referenced by CFitProblem::initialize().

◆ getCrossValidationCount()

size_t CFitItem::getCrossValidationCount ( ) const

Retrieve the number of cross validations

Returns: size_t size

References mpGrpAffectedCrossValidations, and CCopasiParameterGroup::size().

Referenced by CFitProblem::initialize().

◆ getCrossValidations()

std::string CFitItem::getCrossValidations ( ) const

Retrieve a string listing all cross validations the item applies to

Returns: std::string crossValidations

References CKeyFactory::get(), CRootContainer::getKeyFactory(), CDataObject::getObjectName(), CCopasiParameterGroup::getValue(), mpGrpAffectedCrossValidations, and CCopasiParameterGroup::size().

◆ getExperiment()

const std::string & CFitItem::getExperiment ( const size_t & index ) const

Retrieve the key of the indexed experiment.

Parameters

const size_t & index

Returns: const std::string & key

References CCopasiParameterGroup::getValue(), mpGrpAffectedExperiments, and CCopasiParameterGroup::size().

Referenced by CFitProblem::initialize(), and CFitProblem::printResult().

◆ getExperimentCount()

size_t CFitItem::getExperimentCount ( ) const

Retrieve the number of experiments

Returns: size_t size

References mpGrpAffectedExperiments, and CCopasiParameterGroup::size().

Referenced by CFitProblem::initialize(), and CFitProblem::printResult().

◆ getExperiments()

std::string CFitItem::getExperiments ( ) const

Retrieve a string listing all experiments the item applies to

Returns: std::string experiments

References CKeyFactory::get(), CRootContainer::getKeyFactory(), CDataObject::getObjectName(), CCopasiParameterGroup::getValue(), mpGrpAffectedExperiments, and CCopasiParameterGroup::size().

Referenced by CFitProblem::initialize().

◆ getLocalValue()

const C_FLOAT64 & CFitItem::getLocalValue ( ) const

Retrieve the local value.

Returns: const C_FLOAT64 & value

References mLocalValue.

Referenced by CFitProblem::calculate(), CFitProblem::createParameterSets(), CFitProblem::initialize(), CFitProblem::restore(), updateBounds(), and CFitProblem::updateContainer().

◆ getObjectValue()

const C_FLOAT64 * CFitItem::getObjectValue ( ) const

overridevirtual

Retrieve the value of the optimization object.

Returns: const C_FLOAT64 * objectValue

Reimplemented from COptItem.

References mLocalValue.

◆ initializeParameter()

void CFitItem::initializeParameter ( )

private

Allocates all group parameters and assures that they are properly initialized.

References CCopasiParameterGroup::assertGroup(), elevateChildren(), mpGrpAffectedCrossValidations, and mpGrpAffectedExperiments.

Referenced by CFitItem().

◆ isValid() [1/2]

bool CFitItem::isValid ( ) const

overridevirtual

Check the validity of the optimization item.

Returns: bool isValid

Reimplemented from COptItem.

References COptItem::isValid().

Referenced by isValid().

◆ isValid() [2/2]

bool CFitItem::isValid ( CCopasiParameterGroup & group )

static

Check whether the group describes a valid optimization item.

Parameters

CCopasiParameterGroup & group

Returns: bool isValid

References isValid(), and NO_PARENT.

◆ removeCrossValidation()

bool CFitItem::removeCrossValidation ( const size_t & index )

Remove the indexed experiment from the affected cross validations

Parameters

const size_t & index

Returns: bool success

References mpGrpAffectedCrossValidations, and CCopasiParameterGroup::removeParameter().

◆ removeExperiment()

bool CFitItem::removeExperiment ( const size_t & index )

Remove the indexed experiment from the affected experiments

Parameters

const size_t & index

Returns: bool success

References mpGrpAffectedExperiments, and CCopasiParameterGroup::removeParameter().

◆ setLocalValue()

void CFitItem::setLocalValue ( const C_FLOAT64 & value )

Set the local value.

Parameters

const C_FLOAT64 & value

References mLocalValue.

◆ updateBounds()

bool CFitItem::updateBounds ( const std::vector< COptItem * > & items )

Update bounds

Parameters

const std::vector<COptItem * > & items

Returns: bool success

References getLocalValue(), COptItem::getLowerBound(), COptItem::getUpperBound(), COptItem::mpLowerBound, COptItem::mpLowerObject, COptItem::mpUpperBound, and COptItem::mpUpperObject.

Referenced by CFitProblem::initialize().

Friends And Related Function Documentation

◆ CFitProblem

friend class CFitProblem

friend

◆ operator<<

std::ostream& operator<<	(	std::ostream &	os,
		const CFitItem &	o
	)

friend

Output stream operator

Parameters

ostream	& os
const	CFitItem & A

Returns: ostream & os

Member Data Documentation

◆ mLocalValue

C_FLOAT64 CFitItem::mLocalValue

protected

The value for local items, which affect the experiments in the list.

Referenced by checkConstraint(), compile(), getConstraintViolation(), getLocalValue(), getObjectValue(), and setLocalValue().

◆ mpGrpAffectedCrossValidations

CCopasiParameterGroup* CFitItem::mpGrpAffectedCrossValidations

protected

A pointer to the value of the CCopasiParameterGroup holding the list of Affected Validation Experiments

Referenced by addCrossValidation(), elevateChildren(), getCrossValidation(), getCrossValidationCount(), getCrossValidations(), initializeParameter(), and removeCrossValidation().

◆ mpGrpAffectedExperiments

CCopasiParameterGroup* CFitItem::mpGrpAffectedExperiments

protected

A pointer to the value of the CCopasiParameterGroup holding the list of AffectedExperiments

Referenced by addExperiment(), elevateChildren(), getExperiment(), getExperimentCount(), getExperiments(), initializeParameter(), and removeExperiment().

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Private Member Functions

Friends

Additional Inherited Members

Constructor & Destructor Documentation

◆ CFitItem() [1/5]

◆ CFitItem() [2/5]

◆ CFitItem() [3/5]

◆ CFitItem() [4/5]

◆ CFitItem() [5/5]

◆ ~CFitItem()

Member Function Documentation

◆ addCrossValidation()

◆ addExperiment()

◆ checkConstraint()

◆ compile()

◆ elevateChildren()

◆ getConstraintViolation()

◆ getCrossValidation()

◆ getCrossValidationCount()

◆ getCrossValidations()

◆ getExperiment()

◆ getExperimentCount()

◆ getExperiments()

◆ getLocalValue()

◆ getObjectValue()

◆ initializeParameter()

◆ isValid() [1/2]

◆ isValid() [2/2]

◆ removeCrossValidation()

◆ removeExperiment()

◆ setLocalValue()

◆ updateBounds()

Friends And Related Function Documentation

◆ CFitProblem

◆ operator<<

Member Data Documentation

◆ mLocalValue

◆ mpGrpAffectedCrossValidations

◆ mpGrpAffectedExperiments