- c -
- c_str()
: CLocaleString
- calcEigenValues()
: CEigen
- calcForces()
: CLayoutEngine
- calcRHS()
: CLayoutEngine
- calculate()
: CBitPatternMethod
, CBitPatternTreeMethod
, CEFMAlgorithm
, CEFMMethod
, CEvaluationNode
, CEvaluationNodeCall
, CEvaluationNodeChoice
, CEvaluationNodeFunction
, CEvaluationNodeLogical
, CEvaluationNodeOperator
, CEvaluationNodeVariable
, CEvaluationTree
, CFitProblem
, CLyapMethod
, CLyapWolfMethod
, CMathObject
, CMathTrigger
, CMetab
, CModelEntity
, COptProblem
, CReaction
, CRealProblem
, CScanMethod
, CSSAMethod
, ValueScale
- calculate_cubicbezier()
: CLLayoutRenderer
- calculate_difference()
: CSensMethod
- calculate_intersection()
: CLLayoutRenderer
- calculate_intersection_point_2d()
: CLLayoutRenderer
- calculate_one_level()
: CSensMethod
- calculateAbsoluteValue()
: CCellDesignerImporter
- calculateAmu()
: CHybridMethod
, CHybridMethodLSODA
, CHybridMethodODE45
, CStochDirectMethod
, CStochMethod
, CTauLeapMethod
, CTrajAdaptiveSA
, CTrajectoryMethodDsaLsodar
- calculateAndAssignBounds()
: CLayout
, CQGLLayoutPainter
- calculateAngle()
: CQGLNetworkPainter
- calculateBoundingBox()
: CLayout
, CLCurve
- calculateCirclePoints()
: CQGLNetworkPainter
- calculateCombinations()
: CEFMAlgorithm
- calculateConstraintViolation()
: CFitConstraint
- calculateCovarianceMatrixFull()
: CLNAMethod
- calculateCovarianceMatrixReduced()
: CLNAMethod
- calculateCrossValidation()
: CFitProblem
- calculateDelayedTime()
: CMathEvent
- calculateDerivative()
: CHybridMethod
, CHybridMethodLSODA
- calculateDerivatives()
: CModel
, CTSSAMethod
- calculateDerivativesX()
: CModel
, CNewtonMethod
, CTSSAMethod
- calculateDivergence()
: CModel
- calculateElasticityMatrix()
: CModel
- calculateFiringTime()
: CInterpolation
- calculateFlux()
: CReaction
- calculateFluxModes()
: CEFMAlgorithm
- calculateInitialActivity()
: CMathTrigger
- calculateJacobian()
: CCSPMethod
, CModel
- calculateJacobianX()
: CModel
, CSteadyStateMethod
- calculateNextTableau()
: CEFMAlgorithm
- calculatePartialDerivative()
: CReaction
- calculateParticleFlux()
: CReaction
- calculatePositionFromValue()
: CopasiSlider
- calculatePropensities()
: CTrajectoryMethodDsaLsodar
- calculateRootDerivatives()
: CMathModel
, CModel
- calculateRootJacobian()
: CMathModel
- calculateState()
: CInterpolation
- calculateStatistics()
: CExperiment
, CExperimentSet
, CFitProblem
, COptProblem
, CSBMLunitInterface
- calculateTrueValue()
: CMathTrigger
, CMathTrigger::CRootFinder
- calculateUnscaledConcentrationCC()
: CMCAMethod
- calculateUnscaledElasticities()
: CMCAMethod
- calculateUnscaledFluxCC()
: CMCAMethod
- calculateValueFromPosition()
: CopasiSlider
- calculateWeights()
: CExperiment
- calculationsBeforeOutput()
: CLyapTask
- calcValue()
: CExpression
, CFunction
, CMassAction
- calls()
: CEvaluationNodeCall
, CEvaluationTree
- cancel()
: CNormalFraction
, FontChooser
, NodeSizePanel
- cancelButton_clicked()
: CCopasiSelectionDialog
- cancelButtonPressed()
: SliderSettingsDialog
- cancelClicked()
: ObjectBrowserDialog
- castObject()
: CAnnotation
- catchSliderMoved()
: ScrollBar
- catchValueChanged()
: ScrollBar
- CCallParameters()
: CCallParameters< Type >
- CCellDesignerImporter()
: CCellDesignerImporter
- CChemEq()
: CChemEq
- CChemEqElement()
: CChemEqElement
- CChemEqInterface()
: CChemEqInterface
- CChemEqParser()
: CChemEqParser
- CChemEqParserBase()
: CChemEqParserBase
- CColorScale()
: CColorScale
- CColorScale1()
: CColorScale1
- CColorScaleAdvanced()
: CColorScaleAdvanced
- CColorScaleAverage()
: CColorScaleAverage
- CColorScaleBiLog()
: CColorScaleBiLog
- CColorScaleSimple()
: CColorScaleSimple
- CCompartment()
: CCompartment
- CCompartmentGraphNode()
: CCompartmentGraphNode
- CCompressedColumnFormat()
: CCompressedColumnFormat
- CConcentrationReference()
: CConcentrationReference
- CConfigurationFile()
: CConfigurationFile
- CCopasiContainer()
: CCopasiContainer
- CCreator()
: CCreator
- CCrossSectionMethod()
: CCrossSectionMethod
- CCrossSectionProblem()
: CCrossSectionProblem
- CCrossSectionTask()
: CCrossSectionTask
- CCrossValidationSet()
: CCrossValidationSet
- CCSPMethod()
: CCSPMethod
- change_style()
: CLLayoutRenderer
, CQGLLayoutPainter
, CQGLLayoutViewer
, CQNewMainWindow
- changeColorSlot()
: CQNewMainWindow
- changeContents()
: CQArrayAnnotationsWidget
, CQTSSAResultSubWidget
- changed()
: CCopasiDataModel
- changedInterval()
: CQTSSATimeScaleWidget
- changeEvent()
: SliderDialog
- changeFontSize()
: CQLayoutMainWindow
, FontChooser
- changeFrameRate()
: CQParaPanel
- changeInterval()
: CQTSSAResultSubWidget
- changeMethod()
: CQTaskMethodWidget
- changeMinMaxNodeSizes()
: CQLayoutMainWindow
- changeModel()
: CFixLocalReactionParameters
- changeStepValue()
: CQLayoutMainWindow
- changeTargetFunctions()
: CSensProblem
- changeType()
: CScanWidgetRandom
- changeVariables()
: CSensProblem
- characterDataHandler()
: CExpatTemplate< CType >
- characters()
: CStructureParser
- charhndl()
: CMiaseParser
- check_fbo_status()
: CQGLLayoutPainter
- check_for_spatial_size_units()
: CSBMLExporter
- checkCallParameters()
: CFunctionParameterMap
- checkConditionTree()
: CNormalChoice
, CNormalChoiceLogical
- checkConstraint()
: CFitConstraint
, CFitItem
, COptItem
- checkCurve()
: CQGLNetworkPainter
- checkDenominatorOne()
: CNormalFraction
- checkElementUnits()
: SBMLImporter
- checkExpressionTree()
: CNormalChoice
- checkFactor()
: CNormalSum
- checkForElementaryModesSlot()
: CQNewMainWindow
- checkForEvents()
: CSBMLExporter
- checkForFractions()
: CNormalFraction
- checkForInitialAssignments()
: CSBMLExporter
- checkForMessage()
: CCopasiMessage
- checkForODESpeciesInNonfixedCompartment()
: CSBMLExporter
- checkForPiecewiseFunctions()
: CSBMLExporter
- checkForUnsupportedFunctionCalls()
: CSBMLExporter
- checkForUnsupportedObjectReferences()
: CSBMLExporter
- checkFunctionalConstraints()
: CFitProblem
, COptProblem
- checkIfIdsUnique()
: test000058
, test000059
- checkIsOne()
: CNormalFraction
, CNormalGeneralPower
, CNormalSum
- checkIsZero()
: CNormalFraction
, CNormalSum
- checkKineticFunction()
: CFunctionAnalyzer
- checkLinkAnchor()
: CCellDesignerImporter
- checkLinkAnchors()
: CCellDesignerImporter
- checkLowerBound()
: COptItem
- checkModel()
: CFixLocalReactionParameters
, CHybridMethod
, CHybridMethodLSODA
, CHybridMethodODE45
, CModelAnalyzer
, CStochMethod
- checkNumeratorOne()
: CNormalFraction
- checkParametricConstraints()
: COptProblem
- checkPendingMessages()
: CopasiUI3Window
- checkReaction()
: CModelAnalyzer
- checkRegExp()
: MiriamWebServicesSoapBindingProxy
- checkRuleMathConsistency()
: SBMLImporter
- checkSamePowerList()
: CNormalProduct
- checkSummationTheorems()
: CMCAMethod
- checkTimeSeries()
: CQTrajectoryWidget
- checkUpperBound()
: COptItem
- childLocalMin()
: COptMethodSS
- chkTabClicked()
: CQReportDefinition
- chkTitleClicked()
: CQReportDefinition
- chooseCellMatrix()
: CCopasiSelectionDialog
- classToEnum()
: CCellDesignerImporter
- clean()
: CRDFGraph
- cleanSet()
: CNormalLogical
- cleanSetOfSets()
: CNormalLogical
- cleanup()
: CChemEq
, CChemEqElement
, CCompartment
, CCopasiTask
, CCopasiVector< T >
, CCrossSectionTask
, CEigen
, CEvent
, CFitTask
, CFunctionDB
, CFunctionParameter
, CFunctionParameters
, CGA
, CHybridMethod
, CHybridMethodLSODA
, CHybridMethodODE45
, CKinFunction
, CLNATask
, CLyapTask
, CMCATask
, CMetab
, CMetabOld
, CMoiety
, CNewtonMethod
, CNodeK
, COptions
, COptMethod
, COptMethodCoranaWalk
, COptMethodDE
, COptMethodEP
, COptMethodGA
, COptMethodGASR
, COptMethodHookeJeeves
, COptMethodLevenbergMarquardt
, COptMethodNelderMead
, COptMethodPraxis
, COptMethodPS
, COptMethodSA
, COptMethodSRES
, COptMethodSS
, COptMethodSteepestDescent
, COptMethodTruncatedNewton
, COptTask
, COscillationMethod
, COscillationTask
, COutputDefinitionVector
, CPlotItem
, CPlotSpecification
, CQReportDefinitionSelect
, CReaction
, CReport
, CReportBody
, CReportDefinition
, CReportDefinitionVector
, CReportTable
, CScanTask
, CSensTask
, CSparseMatrix
, CSteadyStateTask
, CTauLeapMethod
, CTrajectoryMethodDsaLsodar
, CTrajectoryTask
, CTSSATask
, ObjectBrowserWidget
- cleanupNodes()
: CKinFunction
- cleanupScanItems()
: CScanMethod
- clear()
: CCallParameters< Type >
, CCopasiParameterGroup
, CCopasiVector< T >
, CDependencyGraph
, CFunctionAnalyzer::Result
, CIndexedPriorityQueue
, CLCurve
, CLNAResultSubwidget
, CMathDependencyGraph
, CMCAResultSubwidget
, CModelParameterGroup
, CQBaseDataModel
, CQBrowserPaneDM
, CQLayoutsDM
, CQMoietiesTaskResult
, CQParameterSetsDM
, CQRDFTreeView
, CTimeSeries
, SliderDialog
, StateSubwidget
- clear_cached_data()
: CLLayoutRenderer
- clear_extension_functions()
: CQGLLayoutPainter
- clearArrays()
: CQMathMatrixWidget
, CQSensResultWidget
, CQUpdatesWidget
- clearBuffers()
: CopasiPlot
- clearCallParameter()
: CFunctionParameterMap
- clearCallParameters()
: CFunctionParameterMap
- clearClicked()
: ObjectBrowserWidget
- clearData()
: CRDFObject
, CRDFSubject
- clearDeque()
: CCopasiMessage
- clearDirectDependencies()
: CCopasiObject
- clearFunction()
: CReactionInterface
- clearHistory()
: CQTaskMethodWidget
- clearInvalidEntries()
: CBiologicalDescription
, CReference
- clearModifiers()
: CChemEqInterface
- clearMoieties()
: CModel
- clearParameterMapping()
: CReaction
- clearParameters()
: CEvaluationNodeCall
- clearPivoting()
: CLinkMatrix
- clearRefresh()
: CCopasiObject
- clearScanItems()
: CScanProblem
- clearSelection()
: CLLayoutRenderer
- clearSliderBox()
: SliderDialog
- clearText()
: CLTextGlyph
- clearWidget()
: CQArrayAnnotationsWidget
, CQTSSATimeScaleWidget
- clearWidgetList()
: CScanContainerWidget
- clicked()
: CQPushButtonDelegate
- clickToReverseCheck()
: ObjectBrowserWidget
- clone()
: Bar
, CLCompartmentGlyph
, CLGeneralGlyph
, CLGraphicalObject
, CLMetabGlyph
, CLMetabReferenceGlyph
, CLReactionGlyph
, CLReferenceGlyph
, CLTextGlyph
, ColumnScale
, RowScale
, ValueScale
- close()
: COutputInterface
, CReport
- closeButton_clicked()
: AboutDialog
- closeButtonClicked()
: CopasiSlider
- closeClicked()
: CopasiSlider
- closeEvent()
: CopasiUI3Window
, CProgressBar
, CQAnimationWindow
, CQNewMainWindow
, PlotWindow
, SliderDialog
- closerChild()
: COptMethodSS
- closerRefSet()
: COptMethodSS
- col()
: CSparseMatrixElement
- collapsRequested()
: CSensProblem
- collectIdenticalBranches()
: CEvaluationNodeNormalizer
- collectIds()
: CSBMLExporter
, SBMLUtils
- color()
: CLGradientStops
- columnCount()
: CQBiologicalDescriptionDM
, CQBrowserPaneDM
, CQCompartmentDM
, CQCreatorDM
, CQEFMNetReactionDM
, CQEFMReactionDM
, CQEFMSpeciesDM
, CQEventDM
, CQFluxModeDM
, CQFunctionDM
, CQGlobalQuantityDM
, CQLayoutsDM
, CQModifiedDM
, CQParameterOverviewDM
, CQParameterSetsDM
, CQPlotDM
, CQReactionDM
, CQReferenceDM
, CQReportDM
, CQSpecieDM
, CQTimeSeriesDM
- combination()
: COptMethodSS
- combine()
: CBitPatternMethod
, CBitPatternTreeMethod
- combineMaps()
: SBMLDocumentLoader
- commentChanged()
: CQReportDefinition
- commentHandler()
: CExpatTemplate< CType >
- commit()
: CCopasiSelectionWidget
, CWriteConfig
, DataModelGUI
, ListViews
- commitClicked()
: CQSimpleSelectionTree
, ObjectBrowserWidget
- commitInput()
: CQCrossSectionTaskWidget
- commitPlot()
: CQPlotSubwidget
- commonAfterLoad()
: CCopasiDataModel
- commonAfterRunTask()
: TaskWidget
- commonBeforeRunTask()
: TaskWidget
- commonRunTask()
: TaskWidget
- compact()
: CStepMatrix
- compare()
: CDimension
, CExperiment
- compareCol()
: CSparseMatrixElement
- compareRow()
: CSparseMatrixElement
- compareValue()
: COptions
, COptions::COptionValue
- compareWithModel()
: CModelParameterSet
- compile()
: CEvaluationNode
, CEvaluationNodeCall
, CEvaluationNodeChoice
, CEvaluationNodeDelay
, CEvaluationNodeFunction
, CEvaluationNodeLogical
, CEvaluationNodeObject
, CEvaluationNodeOperator
, CEvaluationNodeVariable
, CEvaluationTree
, CEvent
, CEventAssignment
, CExperiment
, CExperimentObjectMap
, CExperimentSet
, CExpression
, CFitItem
, CMassAction
, CMathEvent::CAssignment
, CMathEvent
, CMathEventN::CAssignment
, CMathEventN
, CMathEventN::CTrigger
, CMathEventN::CTrigger::CRoot
, CMathExpression
, CMathModel
, CMathObject
, CMathTrigger
, CMathTrigger::CRootFinder
, CMetab
, CModel
, CModelEntity
, CModelParameter
, CModelParameterGroup
, CModelParameterReactionParameter
, CModelParameterSpecies
, CopasiPlot
, COptItem
, COutputHandler
, COutputHandlerPlot
, COutputInterface
, CReaction
, CReport
, CSlider
, CTimeSeries
, PlotWindow
- compileAND()
: CMathEventN::CTrigger
, CMathTrigger
- compileChildReport()
: CReport
- compileDependentMass()
: CMathObject
- compileDiscreteChanges()
: CMathContainer
- compileEQ()
: CMathEventN::CTrigger
, CMathTrigger
- compileEvents()
: CMathContainer
, CModel
- compileExpression()
: CMathObject
- compileEXPRESSION()
: CMathTrigger
- compileFlux()
: CMathObject
- compileFUNCTION()
: CMathEventN::CTrigger
, CMathTrigger
- compileGE()
: CMathTrigger
- compileGT()
: CMathTrigger
- compileIfNecessary()
: CModel
- compileInitialValue()
: CMathObject
- compileInitialValueDependencies()
: CMetab
- compileIsInitialConcentrationChangeAllowed()
: CMetab
- compileLE()
: CMathEventN::CTrigger
, CMathTrigger
- compileLowerBound()
: COptItem
- compileLT()
: CMathTrigger
- compileNE()
: CMathEventN::CTrigger
, CMathTrigger
- compileNodes()
: CEvaluationTree
- compileNOT()
: CMathEventN::CTrigger
, CMathTrigger
- compileObjects()
: CMathContainer
- compileOR()
: CMathTrigger
- compileParticleFlux()
: CMathObject
- compilePattern()
: CDirEntry
- compilePropensity()
: CMathObject
- compileRate()
: CMathObject
- compileRefresh()
: COutputHandler
- compileTotalMass()
: CMathObject
- compileTree()
: CDerive
- compileUpperBound()
: COptItem
- compileValue()
: CMathObject
- compileVARIABLE()
: CMathEventN::CTrigger
, CMathTrigger
- compileXOR()
: CMathTrigger
- completeCompartments()
: CChemEqInterface
- completeFunctionList()
: CFunction
- completePivotInformation()
: CLinkMatrix
- configure()
: Bar
- confirmDelete()
: CQMessageBox
- confirmOverwrite()
: CReport
- connectFromScratch()
: CReactionInterface
- connectionPolicyToEnum()
: CCellDesignerImporter
- connectNonMetabolites()
: CReactionInterface
- const_iterator()
: CCopasiTree< _Node >::const_iterator
- const_row_iterator()
: CCompressedColumnFormat::const_row_iterator
- constructCallParameters()
: CFunctionAnalyzer
- constructCallParametersActualValues()
: CFunctionAnalyzer
- constructDisplayElement()
: CDimension
- contains()
: CModelExpansion::SetOfModelElements
- containsInvalid()
: CFunctionAnalyzer::CValue
- containsNaN()
: CNewtonMethod
- containsNegative()
: CFunctionAnalyzer::CValue
- containsPositive()
: CFunctionAnalyzer::CValue
- containsVolume()
: SBMLImporter
- containsZero()
: CFunctionAnalyzer::CValue
- context()
: CNodeContextIterator< Node, Context >
- contextMenuEvent()
: CQBarChart
, CQGLNetworkPainter
, SliderDialog
- convert()
: CMathMLToTeX
, CRDFGraphConverter
, CStepMatrixColumn
- convert2NonReversible()
: CModel
- convert_to_absolute()
: CLLayoutRenderer
- convert_to_l1v1()
: CSBMLExporter
- convert_to_model_space()
: CLLayoutRenderer
- convertAndOrToOrAnd()
: CNormalLogical
- convertASTTreeToLevel1()
: CSBMLExporter
- convertCellDesignerLayout()
: CCellDesignerImporter
- convertCompartmentAnnotations()
: CCellDesignerImporter
- convertGlobalToLocalStyle()
: CLRenderFlattener
- convertLayoutObjectIds()
: SBMLDocumentLoader
- convertLayoutObjectKeys()
: SBMLDocumentLoader
- convertPropertyIds()
: SBMLDocumentLoader
- convertReactionAnnotation()
: CCellDesignerImporter
- convertReactionAnnotations()
: CCellDesignerImporter
- convertRenderInformationReferencesIds()
: SBMLDocumentLoader
- convertRenderInformationReferencesKeys()
: SBMLDocumentLoader
- convertRow()
: CStepMatrix
- convertSBMLCubicmetresToLitres()
: SBMLImporter
- convertScaleNameToScale()
: CSlider
- convertScaleToScaleName()
: CSlider
- convertSpeciesAnnotations()
: CCellDesignerImporter
- convertToASTNode()
: CSBMLExporter
- convertToConcentration()
: CMetab
- convertToInitialExpression()
: CMathExpression
- convertToLevel1()
: CSBMLExporter
- convertToNumber()
: CMetab
- copasiNot()
: CEvaluationNodeFunction
- copy()
: C2DCurveData
, CBandedGraphData
, CEvaluationTree
, CGA
, CHistoCurveData
, CMathEventN::CAssignment
, CMathEventN
, CMathEventN::CTrigger
, CMathEventN::CTrigger::CRoot
, CMathExpression
, CMathObject
, CMathReaction
, CModelParameterGroup
, CNormalBase
, CNormalCall
, CNormalChoice
, CNormalChoiceLogical
, CNormalFraction
, CNormalFunction
, CNormalGeneralPower
, CNormalItem
, CNormalItemPower
, CNormalLogical
, CNormalLogicalItem
, CNormalProduct
, CNormalSum
, COptMethodEP2
, COptMethodHGASA
, CQCompartment
, CQSpeciesDetail
, CUpDownSubwidget
, CVector< CType >
, ReactionsWidget1
- copyBranch()
: CEvaluationNode
, CMathContainer
, CMathTrigger
- copyClicked()
: CQTabWidget
- copyCompleteModel()
: CModelExpansion
- copyDelayExpression()
: CModelAdd
- copyEventAssignmentExpression()
: CModelAdd
- copyExpression()
: CModelAdd
- copyFunctionContentsToFunction()
: FunctionWidget1
- copyInitialExpression()
: CModelAdd
- copyMapping()
: CReactionInterface
- copyNode()
: CEvaluationNode
- copyParameterGroupToSensItem()
: CSensProblem
- copyPlot()
: CQPlotSubwidget
- copySensItemToParameterGroup()
: CSensProblem
- copySet()
: CNormalLogical
- copySetOfSets()
: CNormalLogical
- copyTriggerExpression()
: CModelAdd
- copyWidget()
: CScanContainerWidget
- cornerWidget()
: ScrollZoomer
- correctErrorPosition()
: CChemEqParserBase
, CEvaluationParserBase
- cot()
: CEvaluationNodeFunction
- coth()
: CEvaluationNodeFunction
- countRoots()
: CMathEventN::CTrigger
- countRootsDefault()
: CMathEventN::CTrigger
- countRootsEQ()
: CMathEventN::CTrigger
- countRootsFUNCTION()
: CMathEventN::CTrigger
- countRootsVARIABLE()
: CMathEventN::CTrigger
- countSetBits()
: CZeroSet
- create()
: CEvaluationNode
, CEvaluationTree
, CExpatTemplate< CType >
, CopasiUI3Window
, COptMethodPS
, CProgressBar
- create_gradient_texture()
: CLLayoutRenderer
- create_linear_gradient_texture()
: CLLayoutRenderer
- create_radial_gradient_texture()
: CLLayoutRenderer
- create_texture_for_image()
: CLSimpleImageTexturizer
, CQQtImageTexturizer
- create_texture_for_jpeg_image()
: CLSimpleImageTexturizer
- create_texture_for_png_image()
: CLSimpleImageTexturizer
- createAboutNode()
: CRDFGraph
- createActions()
: CopasiUI3Window
, CQAnimationControls
, CQGLNetworkPainter
, CQLayoutView
, CQNewMainWindow
, CQPlayerControlWidget
, PlotWindow
- createAllowedLocationsAbsolute()
: CRDFPredicate
- createAllowedLocationsRelative()
: CRDFPredicate
- createAllowedStateTags()
: CMiaseParser
- createAnnotationsCNFromCopasiVector()
: CArrayAnnotation
- createAnnotationsM()
: CCSPMethod
, CILDMMethod
, CILDMModifiedMethod
, CTSSAMethod
- createApplyInitialValuesSequence()
: CMathContainer
- createAreaUnit()
: CSBMLExporter
- createBarChart()
: CQArrayAnnotationsWidget
- createBiologicalDescription()
: CMIRIAMInfo
- createBucketIndex()
: ObjectList
- createBVarMap()
: SBMLImporter
- createCatalysisStyles()
: CCellDesignerImporter
- createCCompartmentFromCompartment()
: SBMLImporter
- createCFunctionFromFunctionDefinition()
: SBMLImporter
- createCFunctionFromFunctionTree()
: SBMLImporter
- createChain()
: CNormalTranslation
- createCMetabFromSpecies()
: SBMLImporter
- createCModelFromSBMLDocument()
: SBMLImporter
- createCModelValueFromParameter()
: SBMLImporter
- createColorDefinition()
: CLRenderInformationBase
- createCompartment()
: CModel
, CSBMLExporter
- createCompartmentGlyph()
: CCellDesignerImporter
, CLayoutInitializer
- createCompartmentGlyphs()
: CCellDesignerImporter
- createCompartments()
: CSBMLExporter
- createCompartmentStyle()
: CCellDesignerImporter
- createConvertedExpression()
: CMathObject
- createCopy()
: CFunction
- createCReactionFromReaction()
: SBMLImporter
- createCreator()
: CMIRIAMInfo
- createCrossSectionMethod()
: CCrossSectionMethod
- createCubicBezier()
: CLPolygon
, CLRenderCurve
- createCurve()
: CLGroup
- createDataGenerators()
: CSEDMLExporter
- createDataSets()
: CQGLNetworkPainter
- createDefaultActivatorStyle()
: CCellDesignerImporter
- createDefaultInhibitorStyle()
: CCellDesignerImporter
- createDefaultModifierStyle()
: CCellDesignerImporter
- createDefaultOutput()
: COutputAssistant
- createDefaultPlot()
: CPlotSpecification
- createDefaultProductStyle()
: CCellDesignerImporter
- createDefaultReactionGlyphStyle()
: CCellDesignerImporter
- createDefaultStyles()
: CCellDesignerImporter
- createDefaultSubstrateStyle()
: CCellDesignerImporter
- createDelayFunctionDefinition()
: SBMLImporter
- createDependencyGraphs()
: CMathContainer
- createDiffusionReaction()
: CModelExpansion
- createDir()
: CDirEntry
- createDiscontinuityDataEvent()
: CMathContainer
- createDiscontinuityEvents()
: CMathContainer
- createDiscontinuityTriggerInfix()
: CMathContainer
- createDisplayName2Predicate()
: CRDFPredicate
- createDisplayNameMap()
: CMIRIAMResources
- createEditor()
: CQComboDelegate
, CQDateTimeEditDelegate
, CQPushButtonDelegate
, CQSpinBoxDelegate
- createEllipse()
: CLGroup
- createErrorPage()
: CQAutolayoutWizard
- createEvent()
: CCrossSectionTask
, CModel
, CSBMLExporter
- createEvents()
: CSBMLExporter
- createExpressionFromFunction()
: SBMLImporter
- createExtensiveODERateExpression()
: CMathObject
- createExtensiveReactionRateExpression()
: CMathObject
- createExtensiveValueExpression()
: CMathObject
- createFromModel()
: CModelParameterSet
- createFunctionDefinition()
: CSBMLExporter
- createFunctionDefinitions()
: CSBMLExporter
- createFunctionSetFromFunctionNames()
: CSBMLExporter
- createGenerator()
: CRandom
- createGLMatrix()
: CLLayoutRenderer
- createGradientStop()
: CLGradientBase
- createGraph()
: CQGLNetworkPainter
, CQGLViewport
- createGroup()
: CLGroup
- createHasOnlySubstanceUnitFactor()
: SBMLImporter
- createHistograms()
: CQPlotSubwidget
- createHybridMethod()
: CHybridMethod
- createHybridMethodLSODA()
: CHybridMethodLSODA
- createIdMap()
: CSBMLExporter
- createImage()
: CLGroup
- createInitialAssignment()
: CSBMLExporter
- createInitialAssignments()
: CSBMLExporter
- createInitialExpression()
: CExpression
- createIntensiveRateExpression()
: CMathObject
- createIntensiveValueExpression()
: CMathObject
- createItem()
: CPlotSpecification
- createKineticExpression()
: CSBMLExporter
- createKineticLaw()
: CSBMLExporter
- createLayout()
: CCopasiSpringLayout
, SBMLDocumentLoader
- createLayoutParameterPage()
: CQAutolayoutWizard
- createLayoutWindow()
: CQLayoutsWidget
- createLengthUnit()
: CSBMLExporter
- createLinearArray()
: CModelExpansion
- createLinearGradientDefinition()
: CLRenderInformationBase
- createLineEnding()
: CLRenderInformationBase
- createLineSegments()
: CCellDesignerImporter
- createLineStippleTexture()
: CLLayoutRenderer
- createLinkMatrix()
: CMCAMethod
- createListOfParametersForMathML()
: CFunction
- createMassActionExpression()
: CSBMLExporter
- createMassActionPart()
: CMathExpression
- createMenuBar()
: CopasiUI3Window
- createMenus()
: CQNewMainWindow
, PlotWindow
- createMetabGlyph()
: CLayoutInitializer
- createMetabolite()
: CCompartment
, CModel
, CSBMLExporter
- createMetabolites()
: CReactionInterface
, CSBMLExporter
- createMethod()
: CCopasiTask
, CCrossSectionTask
, CEFMMethod
, CEFMTask
, CFitMethod
, CFitTask
, CLNAMethod
, CLNATask
, CLyapMethod
, CLyapTask
, CMCAMethod
, CMCATask
, CMoietiesMethod
, CMoietiesTask
, COptMethod
, COptTask
, COscillationMethod
, COscillationTask
, CQCrossSectionTaskWidget
, CQEFMWidget
, CQFittingWidget
, CQLNAWidget
, CQLyapWidget
, CQMCAWidget
, CQMoietiesTaskWidget
, CQOptimizationWidget
, CQOscillationTaskWidget
, CQTrajectoryWidget
, CQTSSAWidget
, CScanMethod
, CScanTask
, CSensMethod
, CSensTask
, CSteadyStateMethod
, CSteadyStateTask
, CTrajectoryMethod
, CTrajectoryTask
, CTSSAMethod
, CTSSATask
, ScanWidget
, SensitivitiesWidget
, SteadyStateWidget
, TaskWidget
- createMissingAncestors()
: CRDFNode
- createModel()
: DataModelGUI
, test000097
- createModels()
: CSEDMLExporter
- createModelValue()
: CModel
- createModification()
: CMIRIAMInfo
- createModuloTree()
: CEvaluationNodeOperator
- createNewName()
: CQBaseDataModel
- createNewSlider()
: SliderDialog
- createNodeFromObject()
: CMathContainer
- createNodeFromValue()
: CMathContainer
, CMathExpression
- createNonExistingMetabs()
: CChemEqInterface
- createNumbers()
: CArrayAnnotation
- createObjectiveFunction()
: CFitProblem
- createOperatorChain()
: CNormalTranslation
- createOrthogonal()
: CCellDesignerImporter
- createOtherObjects()
: CReactionInterface
- createParameter()
: CSBMLExporter
- createParameterMapping()
: CMMLOutput
- createParameters()
: CKinFunction
, CSBMLExporter
- createParametersInGroup()
: CSensProblem
- createPlot()
: COutputAssistant
- createPlotSpec()
: COutputDefinitionVector
- createPoint()
: CLPolygon
, CLRenderCurve
- createPolygon()
: CLGroup
- createPrimitive()
: CCellDesignerImporter
- createProteinModification()
: CCellDesignerImporter
- createRadialGradientDefinition()
: CLRenderInformationBase
- createReaction()
: CModel
, CSBMLExporter
- createReactionGlyph()
: CLayoutInitializer
- createReactions()
: CSBMLExporter
- createRectangle()
: CLGroup
- createRectangularArray()
: CModelExpansion
- createReference()
: CMIRIAMInfo
- createReportDefinition()
: CReportDefinitionVector
- createRootMask()
: CLsodaMethod
- createRule()
: CSBMLExporter
- createRules()
: CSBMLExporter
- createSBMLDocument()
: CSBMLExporter
- createScanItem()
: CScanProblem
- createScanItemFromParameterGroup()
: CScanItem
- createScanTask()
: CSEDMLExporter
- createSEDMLDocument()
: CSEDMLExporter
- createSelectionPage()
: CQAutolayoutWizard
- createSideCompoundPage()
: CQAutolayoutWizard
- createSlidersForFolder()
: SliderDialog
- createSpeciesGlyph()
: CCellDesignerImporter
- createSpeciesGlyphs()
: CCellDesignerImporter
- createSpeciesReferenceGlyphs()
: CCellDesignerImporter
- createSpeciesStyles()
: CCellDesignerImporter
- createSpringLayout()
: CQLayoutThread
, CQNewMainWindow
- createStartIcon()
: CQLayoutMainWindow
- createStaticDM()
: CQBrowserPaneDM
- createStatusBar()
: CQNewMainWindow
- createSteadyStateTask()
: CSEDMLExporter
- createStopIcon()
: CQLayoutMainWindow
- createStringFromSet()
: CLStyle
- createStyle()
: CLGlobalRenderInformation
, CLLocalRenderInformation
- createSubstanceUnit()
: CSBMLExporter
- createSynchronizeInitialValuesSequence()
: CMathContainer
- createTable()
: COutputAssistant
- createTasks()
: CSEDMLExporter
- createTauLeapMethod()
: CTrajAdaptiveSA
- createText()
: CLGroup
- createTextGlyphStyle()
: CCellDesignerImporter
- createTexture()
: CQFontRenderer
- createTextureForAllLabels()
: CQGLNetworkPainter
- createTimeCourseTask()
: CSEDMLExporter
- createTimesTree()
: CSBMLExporter
- createTimeUnit()
: CSBMLExporter
- createTmpName()
: CDirEntry
- createToolBar()
: CopasiUI3Window
, PlotWindow
- createToolBars()
: CQNewMainWindow
- createTriggerExpressionNode()
: CMathEventN::CTrigger::CRoot
- createUniqueId()
: CCellDesignerImporter
, CSBMLExporter
- createUnitFraction()
: CNormalFraction
- createUnitGeneralPower()
: CNormalGeneralPower
- createUnitProduct()
: CNormalProduct
- createUnits()
: CSBMLExporter
- createUnitSum()
: CNormalSum
- createUnsupportedFunctionTypeSet()
: CSBMLExporter
- createUpdateSimulationValuesSequence()
: CMathContainer
- createURI2Predicate()
: CRDFPredicate
- createURIMap()
: CMIRIAMResources
- createValue()
: CCopasiParameter
- createValueString()
: CLColorDefinition
- createVariables()
: CCopasiSpringLayout
- createVector()
: BarColor
- createVolumeUnit()
: CSBMLExporter
- creation()
: CGA
, COptMethodDE
, COptMethodEP
, COptMethodGA
, COptMethodGASR
, COptMethodSRES
, COptMethodSS
- critical()
: CQMessageBox
- crossover()
: CGA
, COptMethodGA
, COptMethodGASR
, COptMethodHGASA
- csc()
: CEvaluationNodeFunction
- csch()
: CEvaluationNodeFunction
- cspstep()
: CCSPMethod
- currentChanged()
: CQBrowserPane
- currentIndexChanged()
: CQComboDelegate
- currentRow()
: CQFittingItemWidget
- curvePts()
: BezierCurve
- customEvent()
: CopasiUI3Window