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• CILDMMethod() : CILDMMethod
• CILDMModifiedMethod() : CILDMModifiedMethod
• CIndex() : CZeroSet::CIndex
• CIndexedPriorityQueue() : CIndexedPriorityQueue
• CInternalSolver() : CInternalSolver
• CInterpolation() : CInterpolation
• icon() : CQIconResource
• ignorableWhitespace() : CStructureParser
• ImageElement() : CCopasiXMLParser::ImageElement
• importCellDesigner() : DataModelGUI
• importEvent() : SBMLImporter
• importEvents() : SBMLImporter
• importFirstSBMLModel() : SEDMLImporter
• importFunctionDefinitions() : SBMLImporter
• importInitialAssignments() : SBMLImporter
• importMIRIAM() : SBMLImporter
• importNotes() : SBMLImporter
• importRule() : SBMLImporter
• importRuleForModelEntity() : SBMLImporter
• importSBML() : CCopasiDataModel , DataModelGUI
• importSBMLFinished() : DataModelGUI
• importSBMLFromString() : CCopasiDataModel , CopasiUI3Window , DataModelGUI
• importSBMLFromStringFinished() : DataModelGUI
• importSBMLFromStringRun() : DataModelGUI
• importSBMLRule() : SBMLImporter
• importSBMLRun() : DataModelGUI
• importTasks() : SEDMLImporter
• increaseAllocation() : CTimeSeries
• increment() : CMathDependencyNodeIterator , CNodeContextIterator< Node, Context >
• incrementEvaluations() : COptProblem
• index() : CQBrowserPaneDM , CQParameterOverviewDM
• inforefset() : COptMethodSS
• information() : CQMessageBox
• init() : BezierCurve , CCopasiRootContainer , CLNAResultSubwidget , CMathContainer , CMCAResultSubwidget , COptions , CPermutation , CQAnimationWindow , CQCompartment , CQCrossSectionTaskWidget , CQCurrentValueTable , CQDifferentialEquations , CQEventWidget1 , CQExperimentData , CQExperimentSelection , CQExpressionMmlStackedWidget , CQFittingItemWidget , CQFittingResult , CQFittingResultTab1 , CQFittingWidget , CQIconResource , CQLNAWidget , CQLyapResultWidget , CQLyapWidget , CQMCAWidget , CQModelValue , CQMoietiesTaskResult , CQMoietiesTaskWidget , CQOptimizationResult , CQOptimizationWidget , CQOscillationTaskWidget , CQPreferenceDialog , CQProgressDialog , CQProgressItemBar , CQSensResultWidget , CQSplashWidget , CQSteadyStateResult , CQTrajectoryWidget , CQTSSAResultSubWidget , CQTSSAWidget , CScanMethod , CScanWidgetRandom , CScanWidgetRepeat , CScanWidgetScan , CScanWidgetTask , CUpDownSubwidget , CVisParameters , FunctionWidget1 , ScrollBar , SensitivitiesWidget , SliderDialog , SliderSettingsDialog , StateSubwidget , SteadyStateWidget
• init_by_array() : Cmt19937
• initCallParameters() : CFunctionParameterMap
• initCombos() : SensitivitiesWidget
• initCompartment() : CMetab
• initConversionFactor() : CMoiety
• initDebugProblem() : CSensProblem
• initDefaults() : CLRenderPoint
• initExtendedTimeSeries() : CExperiment
• initFileBuffer() : CReadConfig
• initFirstGeneration() : CGA
• initFrom() : CQAnimationSettingsEditor , CQEffectDescriptionEdit
• initFromLayout() : CCopasiSpringLayout
• initFromObject() : CScanWidgetRandom , CScanWidgetScan
• initFromProcessReportItem() : CQProgressItem , CQProgressItemBar , CQProgressItemText
• initFromReaction() : CReactionInterface
• initFromSpec() : CopasiPlot , PlotWindow
• initialize() : CBitPatternMethod , CBitPatternTreeMethod , CCopasiProblem , CCopasiTask , CCrossSectionMethod , CCrossSectionTask , CEFMAlgorithm , CEFMMethod , CEFMProblem , CEFMTask , CEigen , CFitMethod , CFitProblem , CFitTask , CGA , CLNATask , CLyapTask , CMathEventN::CAssignment , CMathEventN::CTrigger::CRoot , CMathEventN::CTrigger , CMathEventN , CMathObject , CMathReaction , CMCATask , CMoietiesTask , Cmt19937 , CNewtonMethod , COptMethod , COptMethodCoranaWalk , COptMethodDE , COptMethodEP , COptMethodGA , COptMethodGASR , COptMethodHookeJeeves , COptMethodLevenbergMarquardt , COptMethodNelderMead , COptMethodPraxis , COptMethodPS , COptMethodSA , COptMethodSRES , COptMethodSS , COptMethodStatistics , COptMethodSteepestDescent , COptMethodTruncatedNewton , COptProblem , COptTask , COscillationMethod , COscillationMethodIntegrate , COscillationProblem , COscillationTask , COutputAssistant , CProcessQueue , CQCopasiAnimation , Cr250 , CRandom , CRandomSearch , CRDFPredicate , CScanTask , CSensMethod , CSensTask , CSSAMethod , CSteadyStateMethod , CSteadyStateProblem , CSteadyStateTask , CTrajectoryTask , CTSSATask , QConservedSpeciesAnimation , QFluxModeAnimation , QTimeCourseAnimation
• initialize_extension_functions() : CQGLLayoutPainter
• initialize_gl_extension_functions() : CLLayoutRenderer
• initializeAtol() : CTSSAMethod
• initializeAtolVector() : CModel
• initializeChildren() : CCopasiRootContainer
• initializeDefaultUnits() : CSBMLunitInterface
• initializeDiscontinuousCreationPointer() : CMathContainer
• initializeDisplayLists() : CQGLNetworkPainter
• initializeEvents() : CMathContainer
• initializeFromFunctionParameters() : CFunctionParameterMap
• initializeFromSBMLModel() : CSBMLunitInterface
• initializeGL() : CQGLLayoutPainter , CQGLNetworkPainter
• initializeGraphPainter() : CQGLNetworkPainter
• initializeIndexPointer() : CIndexedPriorityQueue
• initializeIntegrationsParameter() : CTSSAMethod
• initializeMathObjects() : CMathContainer
• initializeMetaboliteKeyMap() : CReaction
• initializeMetabolites() : CModel
• initializeObjects() : CMathContainer
• initializeParameter() : CConfigurationFile , CCrossSectionProblem , CCrossValidationSet , CCSPMethod , CEFMProblem , CExperiment , CExperimentObjectMap::CDataColumn , CExperimentObjectMap , CExperimentSet , CFitItem , CFitProblem , CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45 , CILDMMethod , CILDMModifiedMethod , CLNAMethod , CLsodaMethod , CLyapProblem , CLyapWolfMethod , CMCAMethod , CMIRIAMResource , CMIRIAMResources , CNewtonMethod , COptItem , COptProblem , COscillationProblem , CRecentFiles , CScanProblem , CSteadyStateMethod , CStochDirectMethod , CStochMethod , CTauLeapMethod , CTrajAdaptiveSA , CTrajectoryMethodDsaLsodar , CTrajectoryProblem , CTSSAMethod , CTSSAProblem
• initializeParameters() : CReaction
• initializePointers() : CMathContainer
• initializeResolver() : CQLayoutScene
• initializeScalingMatrix() : CExperiment
• initializeSubtaskBeforeOutput() : COptProblem
• InitialStateElement() : CCopasiXMLParser::InitialStateElement
• initMapping() : CReactionInterface
• initMethod() : CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45 , CStochMethod , CStochNextReactionMethod
• initNamespaces() : CRDFWriter
• initObjects() : CBitPatternMethod , CBitPatternTreeMethod , CChemEqElement , CCompartment , CCopasiContainer , CCopasiTask , CCrossSectionProblem , CCrossSectionTask , CEFMAlgorithm , CEFMProblem , CEigen , CEvaluationTree , CEvent , CExpression , CFitProblem , CFittingPoint , CFunctionDB , CLNAMethod , CLyapTask , CMathTrigger::CRootFinder , CMCAMethod , CMetab , CModel , CModelEntity , CModelValue , CMoiety , COptMethodCoranaWalk , COptMethodDE , COptMethodEP , COptMethodGA , COptMethodGASR , COptMethodHookeJeeves , COptMethodLevenbergMarquardt , COptMethodNelderMead , COptMethodPraxis , COptMethodPS , COptMethodSA , COptMethodSRES , COptMethodSS , COptMethodSteepestDescent , COptMethodTruncatedNewton , COptProblem , COscillationMethodIntegrate , COscillationProblem , CPlotItem , CPlotSpecification , CRandomSearch , CReaction , CSensProblem , CSteadyStateTask , CTrajectoryProblem , CTSSAProblem
• initOptRandom() : CGA
• initOrigValues() : CLabel
• initpc_() : CTruncatedNewton
• initSelectionTable() : CQArrayAnnotationsWidget
• initSubtask() : CScanTask
• initTable() : ParameterTable
• initVariables() : CFunction
• insert() : CQRDFTreeView , CSparseMatrix , ObjectList
• insertBucket() : ObjectList
• insertDeterministicReaction() : CHybridMethod , CHybridMethodLSODA
• insertProgressItem() : CQProgressDialog
• insertRow() : CQBaseDataModel
• insertRows() : CQBaseDataModel , CQBiologicalDescriptionDM , CQCompartmentDM , CQCreatorDM , CQEFMNetReactionDM , CQEFMReactionDM , CQEFMSpeciesDM , CQEventDM , CQFluxModeDM , CQFunctionDM , CQGlobalQuantityDM , CQLayoutsDM , CQModifiedDM , CQParameterSetsDM , CQPlotDM , CQReactionDM , CQReferenceDM , CQReportDM , CQSpecieDM , CQTimeSeriesDM
• insertStochReaction() : CIndexedPriorityQueue
• insertValueTable() : CQLayoutMainWindow
• insertWidget() : CScanContainerWidget
• integrateDeterministicPart() : CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45 , CTrajectoryMethodDsaLsodar
• integrateDeterministicPartEuler() : CHybridMethod
• integrationMethodStart() : CTSSAMethod
• integrationStep() : CTSSAMethod
• interpolation() : CInterpolation
• intersection() : CZeroSet
• intialize() : CTrajectoryMethodDsaLsodar::CPartition
• invert() : CFunctionAnalyzer::CValue , CSBMLunit
• invertOrderOfPoints() : CGraphCurve
• is2DTransformation() : CLTransformation
• is_curve_segment_visible() : CLLayoutRenderer
• is_curve_visible() : CLLayoutRenderer
• isActive() : CModelParameterSet , CPlotSpecification
• isArray() : CCopasiObject
• isAutonomous() : CModel
• isBagNode() : CRDFNode
• isBezier() : CLLineSegment
• isBlankNode() : CRDFNode
• isBlockDiagonal() : CCSPMethod
• isBoolean() : CEvaluationNode , CEvaluationNodeCall , CEvaluationNodeConstant , CEvaluationNodeFunction , CEvaluationNodeLogical , CEvaluationParserBase , CEvaluationTree
• isBooleanRequired() : CEvaluationNodeCall
• isBounded() : COptMethod
• isBuiltInFunctionCall() : CSBMLunitInterface
• isChanged() : CCopasiDataModel , CMathDependencyNode , SliderDialog
• isChecked() : ObjectBrowserItem
• isCircleMode() : CQGLNetworkPainter , CQGLViewport
• isCommitOnSelect() : CQComboDelegate
• isCompatible() : CVersion
• isComplete() : CQNoSelectionErrorWizardPage
• isConflict() : CSBMLunitInformation
• isConstantFlux() : SBMLImporter
• isContainer() : CCopasiObject
• isContinuous() : CLCurve
• isContradiction() : CDimension
• isDataModel() : CCopasiObject
• isDefaultRow() : CQBaseDataModel , CQEFMNetReactionDM , CQEFMReactionDM , CQEFMSpeciesDM , CQFluxModeDM , CQLayoutsDM , CQParameterSetsDM , CQTimeSeriesDM
• isDelayFunctionUsed() : SBMLImporter
• isDependent() : CMetab
• isDeprecated() : MiriamWebServicesSoapBindingProxy
• isDimensionless() : CSBMLunit
• isDir() : CDirEntry
• isDisablePlots() : Arguments
• isDisableRandomizeStartValues() : Arguments
• isDisableStatistic() : Arguments
• isDiscrete() : CMathTrigger::CRootFinder
• isDividedByVolume() : CSBMLExporter
• isEmpty() : CArrayAnnotation , CLPoint , CTableCell , CTableRow
• isEmptyString() : CODEExporter
• isEqual() : CNormalLogical::SetOfSetsSorter< TYPE > , CNormalLogical::SetSorter< TYPE > , CSBMLunit , CSBMLunit::SymbolicExponent , CSBMLunitInformation , Refresh , RefreshTemplate< CClass >
• isEquality() : CMathTrigger::CRootFinder
• isEquilibrium() : CSteadyStateMethod
• isEventAssignmentSBMLCompatible() : CSBMLExporter
• isEventSBMLCompatible() : CSBMLExporter
• isExpressionSBMLCompatible() : CSBMLExporter
• isExpressionSBMLL1Compatible() : CSBMLExporter
• isExpressionSBMLL2V1Compatible() : CSBMLExporter
• isExpressionSBMLL2V3Compatible() : CSBMLExporter
• isExtremeRay() : CBitPatternTree , CZeroSet
• isFast() : CReaction
• isFile() : CDirEntry
• isFinished() : CScanItem
• isFixed() : CModelEntity
• isFreeText() : CQNotesContentHandler , CQValidatorXML
• isFunctionCall() : CSBMLunitInterface
• isFunctionReadOnly() : CQFunctionDM
• isGenerateOutput() : Arguments
• isHideWindow() : Arguments
• isIdentifier() : CNodeK
• isIdentityMatrix() : CLTransformation
• isInitialConcentrationChangeAllowed() : CMetab
• isInitialExpressionValid() : CModelParameter
• isInitialValue() : CMathObject
• isInKeyList() : CLLocalStyle
• isInRoleList() : CLStyle
• isInsertAllowed() : CCopasiVectorN< CType >
• isIntensiveProperty() : CMathObject
• isInTypeList() : CLStyle
• isInvalid() : CFunctionAnalyzer::CValue
• isInverted() : ScrollBar
• isJacobianRequested() : CSteadyStateProblem
• isKeyInSet() : CLLocalStyle
• isKeyword() : CEvaluationNode
• isLeftValid() : CNodeK
• isLikePreviousExperiment() : CQExperimentData
• isLocal() : CRDFObject , CRDFSubject
• isLocalParameter() : CReaction
• isLocalURI() : CRaptorInit
• isLocalValue() : CReactionInterface
• isLocked() : CReactionInterface
• isLogScale() : ScrollBar
• isLogX() : CPlotSpecification
• isLogY() : CPlotSpecification
• isMainThread() : CopasiUI3Window
• isMassAction() : SBMLImporter
• isMassActionExpression() : SBMLImporter
• isMassActionFunction() : SBMLImporter
• isMaster() : COutputHandler
• isMatrix() : CCopasiObject
• isMetaboliteNameUnique() : CQSimpleSelectionTree
• isMixingStable() : CSSAMethod
• isModelEntityExpressionODEExporterCompatible() : CODEExporter
• isModelSBMLCompatible() : CSBMLExporter
• isModelSBMLL1Compatible() : CSBMLExporter
• isModelSBMLL2V1Compatible() : CSBMLExporter
• isModelSBMLL2V3Compatible() : CSBMLExporter
• isMulticompartment() : CChemEqInterface , CReactionInterface
• isMultipliedByVolume() : SBMLImporter
• isNameVector() : CCopasiObject
• isNegated() : CNormalLogical
• isNegative() : CFunctionAnalyzer::CValue
• isNesting() : CScanItem , CScanItemRandom
• isNonUniqueName() : CCopasiObject
• isNumber() : CNodeK , CSBMLunitInterface
• isObject() : CSBMLunitInterface
• isObjectNode() : CRDFNode
• isoFormat() : CCopasiTimeVariable
• isOperator() : CNodeK , CSBMLunitInterface
• isPlaying() : CQAnimationControls , CQPlayerControlWidget
• isPositive() : CFunctionAnalyzer::CValue
• isPositiveDirection() : CCrossSectionProblem
• isPrerequisiteForContext() : CConcentrationReference , CCopasiObject , CDependentNumberReference , CMathObject , CObjectInterface , CParticleReference , CTotalNumberReference
• isQuitAfterTaskExecution() : Arguments
• isReactionReversed() : CSSAMethod
• isReactionScope() : CSBMLunitInterface::CEnvironmentInformation
• isReadable() : CDirEntry
• isReadOnly() : CModelParameter , CRDFNode , CRDFPredicate
• isReference() : CCopasiObject
• isRelativePath() : CDirEntry
• isRequested() : CMathDependencyNode
• isReversed() : CFluxMode
• isReversible() : CChemEqParserBase , CFluxMode , CFunction , CReaction , CReactionInterface , CTableauLine
• isRightValid() : CNodeK
• isRoot() : CCopasiObject
• isRowOriented() : CExperiment
• isRunScheduled() : Arguments
• isSaveLayout() : Arguments
• isScheduled() : CCopasiTask
• isSegmentHit() : CLLayoutRenderer
• isSelected() : CLLayoutRenderer
• isSeparator() : CCopasiObject
• isSet() : CZeroSet
• isSetDashArray() : CLGraphicalPrimitive1D
• isSetDeduceSpeciesReferenceRoles() : CLLayoutRenderer
• isSetDrawSelectionDecoration() : CQScreenshotOptionsDialog
• isSetEndHead() : CLGroup , CLRenderCurve
• isSetExportCOPASIMIRIAM() : CSBMLExporter
• isSetFill() : CLGraphicalPrimitive2D
• isSetFillRule() : CLGraphicalPrimitive2D
• isSetFontFamily() : CLGroup , CLText
• isSetFontSize() : CLGroup , CLText
• isSetFontStyle() : CLGroup , CLText
• isSetFontWeight() : CLGroup , CLText
• isSetImageReference() : CLImage
• isSetMatrix() : CLTransformation
• isSetStartHead() : CLGroup , CLRenderCurve
• isSetStroke() : CLGraphicalPrimitive1D
• isSetStrokeWidth() : CLGraphicalPrimitive1D
• isSetText() : CLText
• isSetTextAnchor() : CLGroup , CLText
• isSetVTextAnchor() : CLGroup , CLText
• isSimpleFunctionCall() : SBMLImporter
• isSingleObject() : CSensItem
• isSingleSelection() : CCopasiSelectionWidget
• isSliderActive() : CQBaseWidget
• isSolutionStatistic() : Arguments
• isSourceModified() : CVersion
• isStabilityAnalysisRequested() : CSteadyStateProblem
• isStateVariable() : CModel
• isStaticString() : CCopasiObject
• isSteadyState() : CNewtonMethod , CQOptimizationWidget
• isSteadyStateRequested() : CLNAProblem , CMCAProblem
• isStochasticModel() : SBMLImporter
• isSubjectNode() : CRDFNode
• isSuitable() : CFunction
• isSwitchToTask() : Arguments
• isTable() : CReportDefinition
• isTextSet() : CLTextGlyph
• isTrue() : CMathTrigger::CRootFinder
• isUnique() : CMetabNameInterface
• isUnknown() : CDimension
• isUpdateModel() : CCopasiTask
• isUsable() : CEvaluationTree
• isUsed() : CColorScale , CFunctionParameter , CModelEntity
• isValid() : Arguments , CCopasiDataModel::CData , CEvaluationNodeDepthFirstIterator , CFitItem , CMiaseParser , CMIRIAMResourceObject , CopasiSlider , COptItem , CQExpressionWidget , CReactionInterface , CSlider , CState , CTableauMatrix , MyLineEdit
• isValidEq() : CChemEqInterface
• isValidHandle() : CProcessReport
• isValidKey() : CKeyFactory
• isValidMethod() : CCopasiTask , CEFMTask
• isValidProblem() : CCopasiMethod , CCrossSectionMethod , CEFMMethod , CFitMethod , CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45 , CLNAMethod , CLyapMethod , CLyapWolfMethod , CMCAMethod , CNewtonMethod , COptMethod , COscillationMethod , CScanMethod , CSensMethod , CSteadyStateMethod , CStochDirectMethod , CStochMethod , CTauLeapMethod , CTrajAdaptiveSA , CTrajectoryMethod , CTrajectoryMethodDsaLsodar , CTSSAMethod
• isValidScanItem() : CScanItem , CScanItemLinear , CScanItemRepeat
• isValidSId() : CSBMLExporter
• isValidSubType() : CLyapMethod
• isValidValue() : CCopasiParameter
• isValidXML() : CAnnotation
• isValue() : CTableCell
• isValueBool() : CCopasiObject
• isValueDbl() : CCopasiObject
• isValueInt() : CCopasiObject
• isValueInt64() : CCopasiObject
• isValueString() : CCopasiObject
• isVector() : CCopasiObject , CFunctionParameters , CReactionInterface
• isWritable() : CDirEntry
• isZero() : CFunctionAnalyzer::CValue
• itemChange() : CQConnectionGraphicsItem , CQStyledGraphicsItem
• itemDeleted() : CScanContainerWidget
• itemSelectionChanged() : CQPlotSubwidget
• iterator() : CCopasiTree< _Node >::iterator