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• CCopasiObject() : CCopasiObject
• CCopasiObjectName() : CCopasiObjectName
• CCopasiObjectReference() : CCopasiObjectReference< CType >
• CObjectInterface() : CObjectInterface
• CODEExporter() : CODEExporter
• CODEExporterBM() : CODEExporterBM
• CODEExporterC() : CODEExporterC
• CODEExporterXPPAUT() : CODEExporterXPPAUT
• ColorDefinitionElement() : CCopasiXMLParser::ColorDefinitionElement
• ColumnScale() : ColumnScale
• COMBINE_CALLBACK() : CLLayoutRenderer
• COMBINE_CALLBACK_GRADIENT() : CLLayoutRenderer
• CommentElement() : CCopasiXMLParser::CommentElement
• CompareDefault() : CompareDefault< RandomAccessIterator >
• CompareDoubleWithNaN() : CompareDoubleWithNaN
• CompartmentAlias() : CompartmentAlias
• CompartmentAnnotation() : CompartmentAnnotation
• CompartmentElement() : CCopasiXMLParser::CompartmentElement
• CompartmentGlyphElement() : CCopasiXMLParser::CompartmentGlyphElement
• CompartmentInfo() : CompartmentInfo
• ComplexElement() : CCopasiXMLParser::ComplexElement
• ConnectScheme() : ConnectScheme
• ConstantElement() : CCopasiXMLParser::ConstantElement
• ConstructNodeWidgets() : ListViews
• ConverterASTNode() : ConverterASTNode
• Copasi2SBMLTranslator() : Copasi2SBMLTranslator
• COPASIElement() : CCopasiXMLParser::COPASIElement
• CopasiPlot() : CopasiPlot
• CopasiSlider() : CopasiSlider
• CopasiUI3Window() : CopasiUI3Window
• CopasiWidget() : CopasiWidget
• COptionParser() : copasi::COptionParser
• COptions() : COptions
• COptionValue() : COptions::COptionValue
• COptionValueTemplate() : COptions::COptionValueTemplate< CType >
• COptItem() : COptItem
• COptMethod() : COptMethod
• COptMethodCoranaWalk() : COptMethodCoranaWalk
• COptMethodDE() : COptMethodDE
• COptMethodEP() : COptMethodEP
• COptMethodEP2() : COptMethodEP2
• COptMethodGA() : COptMethodGA
• COptMethodGASR() : COptMethodGASR
• COptMethodHGASA() : COptMethodHGASA
• COptMethodHookeJeeves() : COptMethodHookeJeeves
• COptMethodLevenbergMarquardt() : COptMethodLevenbergMarquardt
• COptMethodNelderMead() : COptMethodNelderMead
• COptMethodPraxis() : COptMethodPraxis
• COptMethodPS() : COptMethodPS
• COptMethodSA() : COptMethodSA
• COptMethodSRES() : COptMethodSRES
• COptMethodSS() : COptMethodSS
• COptMethodStatistics() : COptMethodStatistics
• COptMethodSteepestDescent() : COptMethodSteepestDescent
• COptMethodTruncatedNewton() : COptMethodTruncatedNewton
• COptProblem() : COptProblem
• COptTask() : COptTask
• COscillationMethod() : COscillationMethod
• COscillationMethodIntegrate() : COscillationMethodIntegrate
• COscillationProblem() : COscillationProblem
• COscillationTask() : COscillationTask
• COutputDefinitionVector() : COutputDefinitionVector
• COutputHandler() : COutputHandler
• COutputHandlerPlot() : COutputHandlerPlot
• COutputInterface() : COutputInterface
• object() : CopasiSlider
• object2variable() : CReaction
• objectBoundaries() : CQExpressionWidget
• ObjectBrowserDialog() : ObjectBrowserDialog
• ObjectBrowserItem() : ObjectBrowserItem
• ObjectBrowserWidget() : ObjectBrowserWidget
• ObjectData() : CDotOutput::ObjectData
• ObjectElement() : CCopasiXMLParser::ObjectElement
• ObjectFromCN() : CCopasiDataModel
• ObjectFromName() : CCopasiDataModel
• ObjectList() : ObjectList
• ObjectListItem() : ObjectListItem
• objects2variables() : CReaction
• objectValueChanged() : SliderSettingsDialog
• okButton_clicked() : CCopasiSelectionDialog
• okButtonPressed() : SliderSettingsDialog
• okClicked() : ObjectBrowserDialog
• onCharacterData() : CCopasiXMLParser , CExpat , CExpatTemplate< CType >
• onComment() : CExpat , CExpatTemplate< CType >
• onDefault() : CExpat , CExpatTemplate< CType >
• onEndCdataSection() : CExpat , CExpatTemplate< CType >
• onEndDoctypeDecl() : CExpat , CExpatTemplate< CType >
• onEndElement() : CCopasiXMLParser , CExpat , CExpatTemplate< CType >
• onEndNamespaceDecl() : CExpat , CExpatTemplate< CType >
• onExternalEntityRef() : CExpat , CExpatTemplate< CType >
• onPostCreate() : CExpatTemplate< CType >
• onProcessingInstruction() : CExpat , CExpatTemplate< CType >
• onSkippedEntityHandler() : CCopasiXMLParser , CExpat , CExpatTemplate< CType >
• onStartCdataSection() : CExpat , CExpatTemplate< CType >
• onStartDoctypeDecl() : CExpat , CExpatTemplate< CType >
• onStartElement() : CCopasiXMLParser , CExpat , CExpatTemplate< CType >
• onStartNamespaceDecl() : CExpat , CExpatTemplate< CType >
• onUnknownEncoding() : CExpat , CExpatTemplate< CType >
• onXmlDecl() : CExpat , CExpatTemplate< CType >
• open() : CReport
• openExampleDir() : CopasiFileDialog
• openInitialDocument() : CopasiUI3Window
• operator bool() : CRDFTriplet
• operator const C_FLOAT64 &() : CCopasiXMLInterface::DBL , CSparseMatrixElement
• operator const CMatrix< C_FLOAT64 >() : CSparseMatrix
• operator int() : CMathFlags< Enum >
• operator!=() : CCompressedColumnFormat::const_row_iterator , CCopasiTree< _Node >::const_iterator , CCopasiTree< _Node >::iterator , CEvaluationNode , CLRelAbsVector , CRDFPredicate , CSensItem
• operator&() : CMathFlags< Enum >
• operator&=() : CZeroSet
• operator()() : BarColor , CFortranAccess< Matrix > , CKeyFactory::CDecisionVector , CLFontRendererBase , CLImageTexturizer , CLinkMatrixView , CLowerTriangularView< Matrix > , CLSimpleImageTexturizer , CLSODA , CLSODAR , CMatrix< CType > , CNormalLogical::SetOfSetsSorter< TYPE > , CNormalLogical::SetSorter< TYPE > , CompareDefault< RandomAccessIterator > , CompareDoubleWithNaN , compareGraphicalObjectsBySize , compareItemPowers , compareProducts , CQFontRenderer , CQQtImageTexturizer , CQSideCompoundWizardPage::alphaSorter , CSparseMatrix , CTransposeView< Matrix > , CUnitLowerTriangularView< Matrix > , CUnitUpperTriangularView< Matrix > , CUpperTriangularView< Matrix > , CVectorCore< CType > , Cxerrwd , FDescent , FDescentTemplate< CType > , FPraxis , FPraxisTemplate< CType > , FSwapBase< IndexType, ReturnType > , FSwapClass< ClassType, IndexType, ReturnType > , FTruncatedNewton , FTruncatedNewtonTemplate< CType > , lessCEvaluationNodes , PJAC , PJACFunctor< CType > , Refresh , RefreshTemplate< CClass > , SLVS , SLVSFunctor< CType > , SpecificUpdateMethod< CType, VType > , UpdateMethod
• operator*() : CCompressedColumnFormat::const_row_iterator , CCopasiTree< _Node >::const_iterator , CCopasiTree< _Node >::iterator , CDimension , CEvaluationNodeDepthFirstIterator , CFunctionAnalyzer::CValue , CLPoint , CMathDependencyNodeIterator , CNodeContextIterator< Node, Context >
• operator+() : CCopasiTimeVariable , CDimension , CFunctionAnalyzer::CValue , CLPoint , CLRelAbsVector
• operator++() : CCompressedColumnFormat::const_row_iterator , CCopasiTree< _Node >::const_iterator , CCopasiTree< _Node >::iterator , CEvaluationNodeDepthFirstIterator , CZeroSet::CIndex
• operator+=() : CMath::CAllocationStack::CAllocation
• operator-() : CCopasiTimeVariable , CDimension , CFunctionAnalyzer::CValue , CLPoint
• operator->() : CCompressedColumnFormat::const_row_iterator , CCopasiTree< _Node >::const_iterator , CCopasiTree< _Node >::iterator , CEvaluationNodeDepthFirstIterator , CMathDependencyNodeIterator , CNodeContextIterator< Node, Context >
• operator/() : CFunctionAnalyzer::CValue , CLRelAbsVector
• operator<() : CCopasiTimeVariable , CEvaluationNode , CFluxScore , CLFontSpec , CLLineSegment , CLPoint , CNormalCall , CNormalChoice , CNormalChoiceLogical , CNormalFraction , CNormalFunction , CNormalGeneralPower , CNormalItem , CNormalItemPower , CNormalLogical , CNormalLogicalItem , CNormalProduct , CNormalSum , CProcessQueue::CKey , CQNewMainWindow::REACTION_SELECTION_ITEM , CRDFPredicate , CRDFTriplet , CZeroSet::CIndex
• operator=() : C2DCurveData , CArrayAnnotation , CBandedGraphData , CCompressedColumnFormat::const_row_iterator , CCompressedColumnFormat , CCopasiDataModel::CData , CCopasiMessage , CCopasiParameter , CCopasiParameterGroup , CCopasiReportSeparator , CCopasiRootContainer , CCopasiStaticString , CCopasiTimeVariable , CCopasiTree< _Node >::const_iterator , CCopasiTree< _Node >::iterator , CCopasiVector< T > , CCopasiVectorN< CType > , CEvaluationNodeDepthFirstIterator , CEvent , CExperiment , CExperimentObjectMap::CDataColumn , CFunctionParameters , CGA , CHistoCurveData , CLColorDefinition , CLCompartmentGlyph , CLEllipse , CLGeneralGlyph , CLGlyphWithCurve , CLGradientBase , CLGradientStop , CLGraphicalObject , CLGroup , CLGroupAttributes , CLImage , CLinkMatrixView , CLLinearGradient , CLLineEnding , CLMetabGlyph , CLMetabReferenceGlyph , CLocaleString , CLPolygon , CLRadialGradient , CLReactionGlyph , CLRectangle , CLReferenceGlyph , CLRelAbsVector , CLRenderCubicBezier , CLRenderCurve , CLRenderInformationBase , CLRenderPoint , CLRenderResolver , CLStyle , CLText , CLTextGlyph , CMath::CAllocationStack::CAllocation , CMathFlags< Enum > , CMatrix< CType > , CMetab , CModel , CNormalCall , CNormalChoice , CNormalChoiceLogical , CNormalFraction , CNormalFunction , CNormalGeneralPower , CNormalItem , CNormalItemPower , CNormalLcm , CNormalLogical , CNormalLogicalItem , CNormalProduct , CNormalSum , CRDFNode , CRDFObject , CRDFPredicate , CRDFSubject , CReaction , CSBMLunitInterface , CSparseMatrix , CSparseMatrixElement , CState , CStateRecord , CStochDirectMethod::CReactionDependencies , CTauLeapMethod::CReactionDependencies , CTimeSeries , CTrajAdaptiveSA::CReactionDependencies , CTrajectoryMethodDsaLsodar::CReactionDependencies , CVector< CType > , CVectorCore< CType > , CZeroSet::CIndex
• operator==() : CAnnotation , CDimension , CEvaluationNode , CEvaluationTree , CFunction , CFunctionAnalyzer::CValue , CFunctionParameters , CLCurve , CLLineSegment , CLPoint , CLRelAbsVector , CLRenderPoint , CNormalCall , CNormalChoice , CNormalChoiceLogical , CNormalFraction , CNormalFunction , CNormalGeneralPower , CNormalItem , CNormalItemPower , CNormalLogical , CNormalLogicalItem , CNormalProduct , CNormalSum , CRDFObject , CRDFPredicate , CRDFSubject , CRDFTriplet , CSensItem , CZeroSet
• operator>=() : CZeroSet
• operator[]() : CCallParameters< Type > , CCopasiAbstractArray , CCopasiArray , CCopasiMatrixInterface< CMatrixType > , CCopasiVector< T > , CCopasiVectorInterface< VectorType > , CCopasiVectorN< CType > , CFortranAccess< Matrix > , CFunctionParameters , CIndexedPriorityQueue , CMath::CAllocationStack , CMath::CVariableStack , CMatrix< CType > , CVectorCore< CType >
• operator^() : CFunctionAnalyzer::CValue
• operator|() : CMathFlags< Enum >
• operator|=() : CMathFlags< Enum > , CZeroSet
• oppositeAxis() : ScrollZoomer
• optimise() : CGA , COptMethod , COptMethodCoranaWalk , COptMethodDE , COptMethodEP2 , COptMethodEP , COptMethodGA , COptMethodGASR , COptMethodHGASA , COptMethodHookeJeeves , COptMethodLevenbergMarquardt , COptMethodNelderMead , COptMethodPraxis , COptMethodPS , COptMethodSA , COptMethodSRES , COptMethodSS , COptMethodStatistics , COptMethodSteepestDescent , COptMethodTruncatedNewton , CRandomSearch , CRandomSearchMaster
• option_error() : copasi::option_error
• options() : copasi::options
• Or() : CFunctionAnalyzer::CValue
• order() : CNormalTranslation
• orderFamilies() : CQFontRenderer
• orderRules() : CSBMLExporter
• originalValue() : CopasiSlider
• originalValueChanged() : SliderSettingsDialog
• origValueTextChanged() : SliderSettingsDialog
• orthog() : CTSSAMethod
• orthonormalize() : CLyapWolfMethod
• orValue() : CFunctionAnalyzer::CValue
• output() : CCopasiTask , CopasiPlot , COutputHandler , COutputInterface , CReport , CTimeSeries , PlotWindow
• outputData() : CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45
• outputDebug() : CHybridMethod , CHybridMethodLSODA , CHybridMethodODE45
• outputIncompatibilities() : CSBMLExporter
• outputSeparatorCallback() : CScanTask
• outputState() : CHybridMethodODE45
• outputStatistics() : CSBMLunitInterface