CVector< CType > Class Template Reference

#include <CVector.h>

Inheritance diagram for CVector< CType >:

Public Member Functions
	CVector (const CVector< CType > &src)
	CVector (const CVectorCore< CType > &src)
	CVector (size_t size=0)
CVector< CType > &	operator= (const CType &value)
CVector< CType > &	operator= (const CVector< CType > &rhs)
CVector< CType > &	operator= (const CVectorCore< CType > &rhs)
void	resize (size_t size, const bool &copy=false)
virtual	~CVector ()
Public Member Functions inherited from CVectorCore< CType >
bool	applyPivot (const CVectorCore< size_t > &pivot)
CType *	array ()
const CType *	array () const
CType *	begin ()
const CType *	begin () const
	CVectorCore (const size_t &size=0, CType *buffer=NULL)
CType *	end ()
const CType *	end () const
void	initialize (const CVectorCore< CType > &src)
void	initialize (const size_t &size, const CType *vector)
CType &	operator() (const size_t &row)
const CType &	operator() (const size_t &row) const
CVectorCore< CType > &	operator= (const CType &value)
CVectorCore< CType > &	operator= (const CVectorCore< CType > &rhs)
bool	operator== (const CVectorCore< CType > &rhs) const
CType &	operator[] (const size_t &row)
const CType &	operator[] (const size_t &row) const
size_t	size () const
virtual	~CVectorCore ()

Protected Member Functions
void	copy (const CVectorCore< CType > &rhs)

Additional Inherited Members
Public Types inherited from CVectorCore< CType >
typedef CType	elementType
Protected Attributes inherited from CVectorCore< CType >
CType *	mpBuffer
size_t	mSize

Detailed Description

template<class CType>
class CVector< CType >

Template class CVector < class CType > This template class is a simple vector class allowing standard C-style and fortran style access to the elements. It also supplies an ostream operator.

Constructor & Destructor Documentation

CVector() [1/3]

template<class CType >

CVector< CType >::CVector ( size_t  size = 0 )

inline

Default constructor

Parameters

size_t

size (default = 0)

References CVector< CType >::resize(), and CVectorCore< CType >::size().

CVector() [2/3]

template<class CType >

CVector< CType >::CVector ( const CVectorCore< CType > &  src )

inline

Copy constructor

Parameters

const

CVectorCore <CType> & src

References CVector< CType >::copy().

CVector() [3/3]

template<class CType >

CVector< CType >::CVector ( const CVector< CType > &  src )

inline

Copy constructor

Parameters

const

CVector <CType> & src

References CVector< CType >::copy().

~CVector()

template<class CType >

virtual CVector< CType >::~CVector ( )

inlinevirtual

Destructor.

Member Function Documentation

copy()

template<class CType >

void CVector< CType >::copy ( const CVectorCore< CType > &  rhs )

inlineprotected

References CVectorCore< CType >::array(), CVector< CType >::resize(), and CVectorCore< CType >::size().

Referenced by CVector< CType >::CVector(), CVector< CType >::operator=(), and CVector< CType >::resize().

operator=() [1/3]

template<class CType >

CVector< CType>& CVector< CType >::operator= ( const CType &  value )

inline

Assignment operator

Parameters

const

CType & value

operator=() [2/3]

template<class CType >

CVector< CType >& CVector< CType >::operator= ( const CVector< CType > &  rhs )

inline

Assignment operator

Parameters

const

CVector <CType> & rhs

Returns

CVector <CType> & lhs

References CVector< CType >::copy().

operator=() [3/3]

template<class CType >

CVector< CType >& CVector< CType >::operator= ( const CVectorCore< CType > &  rhs )

inline

Assignment operator

Parameters

const

CVectorCore <CType> & rhs

Returns

CVector <CType> & lhs

References CVector< CType >::copy().

Referenced by CXMLHandlerFactory::CXMLHandlerFactory(), and CMathUpdateSequence::operator=().

resize()

template<class CType >

void CVector< CType >::resize ( size_t  size, const bool &  copy = false  )

inline

Resize the vector. The previous content is lost

Parameters

size_t

size

References C_FLOAT64, CVector< CType >::copy(), CCopasiMessage::EXCEPTION, max, MCopasiBase, min, and CVectorCore< CType >::size().

Referenced by CProcessReport::addItem(), CMathContainer::analyzeRoots(), CLinkMatrix::build(), CEvaluationTree::buildCalculationSequence(), CSSAMethod::buildExtremeCurrents(), CModel::buildStoi(), CModel::buildUserOrder(), CFitProblem::calcCov(), CFitProblem::calcEigen(), CEigen::calcEigenValues(), CLNAMethod::calculateCovarianceMatrixReduced(), CBitPatternMethod::CalculateKernel(), CBitPatternTreeMethod::CalculateKernel(), CExperiment::calculateStatistics(), CExperimentSet::calculateStatistics(), COptProblem::calculateStatistics(), CFitProblem::calculateStatistics(), CMCAMethod::calculateUnscaledConcentrationCC(), CFluxScore::CFluxScore(), CMCAMethod::checkSummationTheorems(), CTimeSeries::clear(), COptMethodSS::combination(), CMathExpression::compile(), CTimeSeries::compile(), CMathEvent::compile(), CExperiment::compile(), CExperimentObjectMap::compile(), CExperimentSet::compile(), CMathObject::compileDependentMass(), CEvaluationTree::compileNodes(), CMathObject::compilePropensity(), CMathObject::compileTotalMass(), CMathObject::compileTransitionTime(), CLinkMatrix::completePivotInformation(), CVector< CType >::copy(), CMathDelay::create(), CMathObject::createExtensiveReactionNoiseExpression(), CMathObject::createExtensiveReactionRateExpression(), CTimeSensLsodaMethod::createRootMask(), CHybridMethodODE45::createRootMask(), CLsodaMethod::createRootMask(), CLsodaMethod2::createRootMask(), CRadau5Method::createRootMask(), CStochasticRungeKuttaRI5::createRootMask(), CCSPMethod::CSPImportanceIndex(), CCSPMethod::CSPParticipationIndex(), CCSPMethod::cspstep(), CVector< CType >::CVector(), CHybridMethodODE45::destroyRootMask(), CILDMMethod::deuflhard(), CILDMModifiedMethod::deuflhard_metab(), CStepMatrixColumn::getAllUnsetBitIndexes(), CStepMatrix::getUnsetBitIndexes(), CMathContainer::ignoreDiscontinuityEvent(), CExperiment::initExtendedTimeSeries(), COptMethodCoranaWalk::initialize(), COptMethodDE::initialize(), COptMethodEP::initialize(), COptMethodGA::initialize(), COptMethodGASR::initialize(), COptMethodHookeJeeves::initialize(), COptMethodLevenbergMarquardt::initialize(), COptMethodNelderMead::initialize(), COptMethodNL2SOL::initialize(), COptMethodPraxis::initialize(), COptMethodPS::initialize(), COptMethodSA::initialize(), COptMethodSRES::initialize(), COptMethodSS::initialize(), COptMethodStatistics::initialize(), COptMethodSteepestDescent::initialize(), COptMethodTruncatedNewton::initialize(), CRandomSearch::initialize(), CEigen::initialize(), COptProblem::initialize(), CFitProblem::initialize(), CMathObject::initialize(), CMathReaction::initialize(), CNewtonMethod::initialize(), CLyapTask::initialize(), CCopasiTask::initialize(), CSensMethod::initialize(), CRootFinder::initialize(), CMathContainer::initializeAtolVector(), CModel::initializeAtolVector(), CTimeSensMethod::initializeDerivativesCalculations(), CLyapTask::initObjects(), LUfactor(), CEvaluationTree::mapObjectNodes(), CTSSAMethod::mat_anal_fast_space_thomas(), CTSSAMethod::mat_anal_metab(), CTSSAMethod::mat_anal_mod(), CILDMMethod::newton(), CILDMModifiedMethod::newton_for_timestep(), CILDMModifiedMethod::newton_new(), COptMethodLevenbergMarquardt::optimise(), partialSortWithPivot(), CHybridMethodODE45::partitionSystem(), CExperiment::read(), CMathContainer::relocate(), CStateTemplate::resize(), CTSSAMethod::schur(), CTSSAMethod::schur_desc(), CFitProblem::setResidualsRequired(), CTimeSensLsodaMethod::setRootMaskType(), CLsodaMethod::setRootMaskType(), CRadau5Method::setRootMaskType(), CHybridMethod::setupPartition(), CStateTemplate::setUserOrder(), CLeastSquareSolution::solve(), sortWithPivot(), CLyapWolfMethod::start(), CMathEventQueue::start(), CTimeSensLsodaMethod::start(), CHybridMethodODE45::start(), CHybridNextReactionRKMethod::start(), CLsodaMethod::start(), CLsodaMethod2::start(), CRadau5Method::start(), CStochasticRungeKuttaRI5::start(), CStochDirectMethod::start(), CTauLeapMethod::start(), CTrajAdaptiveSA::start(), CCSPMethod::start(), CILDMMethod::start(), CILDMModifiedMethod::start(), CILDMMethod::step(), CILDMModifiedMethod::step(), CTSSAMethod::sylvester(), and CCSPMethod::yCorrection().

---

The documentation for this class was generated from the following file:

• CVector.h