COPASI API  4.40.278
CBitPatternTreeMethod Class Reference

#include <CBitPatternTreeMethod.h>

Inheritance diagram for CBitPatternTreeMethod:
[legend]

Public Member Functions

virtual bool calculate ()
 
 CBitPatternTreeMethod (const CBitPatternTreeMethod &src, const CDataContainer *pParent)
 
 CBitPatternTreeMethod (const CDataContainer *pParent, const CTaskEnum::Method &methodType=CTaskEnum::Method::EFMBitPatternTreeAlgorithm, const CTaskEnum::Task &taskType=CTaskEnum::Task::fluxMode)
 
virtual bool initialize ()
 
 ~CBitPatternTreeMethod ()
 
- Public Member Functions inherited from CEFMMethod
 CEFMMethod (const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType=CTaskEnum::Task::fluxMode)
 
 CEFMMethod (const CEFMMethod &src, const CDataContainer *pParent)
 
virtual bool isValidProblem (const CCopasiProblem *pProblem)
 
virtual ~CEFMMethod ()
 
- Public Member Functions inherited from CCopasiMethod
 CCopasiMethod (const CCopasiMethod &src, const CDataContainer *pParent)
 
virtual void clearCallBack ()
 
const CProcessReportLevelgetCallBack () const
 
CMathContainergetMathContainer () const
 
const CTaskEnum::MethodgetSubType () const
 
const CTaskEnum::TaskgetType () const
 
virtual void load (CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH)
 
CCopasiMethodoperator= (const CCopasiMethod &rhs)
 
virtual void print (std::ostream *ostream) const
 
virtual void printResult (std::ostream *ostream) const
 
virtual bool setCallBack (CProcessReportLevel callBack)
 
void setMathContainer (CMathContainer *pContainer)
 
virtual ~CCopasiMethod ()
 
- Public Member Functions inherited from CCopasiParameterGroup
bool addGroup (const std::string &name)
 
void addParameter (CCopasiParameter *pParameter)
 
bool addParameter (const CCopasiParameter &parameter)
 
bool addParameter (const std::string &name, const CCopasiParameter::Type type, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)
 
template<class CType >
bool addParameter (const std::string &name, const CCopasiParameter::Type type, const CType &value, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)
 
virtual bool applyData (const CData &data, CUndoData::CChangeSet &changes)
 
CCopasiParameterGroupassertGroup (const std::string &name, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)
 
template<class CType >
CType * assertParameter (const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All)
 
index_iterator beginIndex () const
 
const_name_iterator beginName () const
 
 CCopasiParameterGroup (const CCopasiParameterGroup &src, const CDataContainer *pParent=NULL)
 
 CCopasiParameterGroup (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="ParameterGroup")
 
void clear ()
 
virtual void createUndoData (CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const
 
virtual bool elevateChildren ()
 
index_iterator endIndex () const
 
const_name_iterator endName () const
 
CCopasiParameterGroupgetElementTemplates ()
 
const CCopasiParameterGroupgetElementTemplates () const
 
CCopasiParameterGroupgetGroup (const size_t &index)
 
const CCopasiParameterGroupgetGroup (const size_t &index) const
 
CCopasiParameterGroupgetGroup (const std::string &name)
 
const CCopasiParameterGroupgetGroup (const std::string &name) const
 
virtual size_t getIndex (const CDataObject *pObject) const
 
size_t getIndex (const std::string &name) const
 
std::string getKey (const size_t &index) const
 
std::string getKey (const std::string &name) const
 
virtual const std::string & getName (const size_t &index) const
 
virtual const CObjectInterfacegetObject (const CCommonName &cn) const
 
CCopasiParametergetParameter (const size_t &index)
 
const CCopasiParametergetParameter (const size_t &index) const
 
CCopasiParametergetParameter (std::string name)
 
const CCopasiParametergetParameter (std::string name) const
 
CCopasiParameter::Type getType (const size_t &index) const
 
CCopasiParameter::Type getType (const std::string &name) const
 
std::string getUniqueParameterName (const CCopasiParameter *pParameter) const
 
template<class CType >
CType & getValue (const size_t &index)
 
template<class CType >
const CType & getValue (const size_t &index) const
 
template<class CType >
CType & getValue (const std::string &name)
 
template<class CType >
const CType & getValue (const std::string &name) const
 
bool haveTemplate () const
 
virtual CUndoObjectInterfaceinsert (const CData &data)
 
CCopasiParameterGroupoperator= (const CCopasiParameterGroup &rhs)
 
virtual bool remove (CDataObject *pObject)
 
bool removeParameter (CCopasiParameter *pParameter)
 
bool removeParameter (const size_t &index)
 
bool removeParameter (const std::string &name)
 
virtual void setUserInterfaceFlag (const UserInterfaceFlag &flag)
 
template<class CType >
bool setValue (const size_t &index, const CType &value)
 
template<class CType >
bool setValue (const std::string &name, const CType &value)
 
size_t size (const UserInterfaceFlag &require=UserInterfaceFlag::None, const UserInterfaceFlag &exclude=UserInterfaceFlag::None) const
 
bool swap (const size_t &iFrom, const size_t &iTo)
 
bool swap (index_iterator &from, index_iterator &to)
 
virtual CData toData () const
 
virtual void updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject)
 
virtual ~CCopasiParameterGroup ()
 
- Public Member Functions inherited from CCopasiParameter
 CCopasiParameter (const CCopasiParameter &src, const CDataContainer *pParent)
 
 CCopasiParameter (const std::string &name, const Type &type, const void *pValue=NULL, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="Parameter")
 
virtual CCommonName getCN () const override
 
template<class CType >
const CType & getDefault () const
 
virtual const std::string & getKey () const override
 
virtual std::string getObjectDisplayName () const override
 
const CCopasiParameter::TypegetType () const
 
const UserInterfaceFlaggetUserInterfaceFlag () const
 
template<class CType >
std::vector< std::pair< CType, CType > > & getValidValues ()
 
template<class CType >
const std::vector< std::pair< CType, CType > > & getValidValues () const
 
void * getValidValuesPointer () const
 
template<class CType >
CType & getValue ()
 
template<class CType >
const CType & getValue () const
 
virtual void * getValuePointer () const override
 
CDataObjectgetValueReference () const
 
bool hasValidValues () const
 
bool isBasic () const
 
bool isDefault () const
 
bool isEditable () const
 
bool isUnsupported () const
 
bool isValidValue (const bool &value) const
 
bool isValidValue (const C_FLOAT64 &value) const
 
bool isValidValue (const C_INT32 &value) const
 
bool isValidValue (const CCommonName &value) const
 
template<class CType >
bool isValidValue (const CType &) const
 
bool isValidValue (const std::string &value) const
 
bool isValidValue (const std::vector< CCopasiParameter * > &value) const
 
bool isValidValue (const unsigned C_INT32 &value) const
 
CCopasiParameteroperator= (const CCopasiParameter &rhs)
 
template<class CType >
bool setDefault (const CType &defaultValue)
 
bool setDefault (const std::vector< CCopasiParameter * > &defaultValue)
 
virtual bool setObjectParent (const CDataContainer *pParent) override
 
template<class CType , class Enum >
bool setValidValues (const CEnumAnnotation< CType, Enum > &validValues)
 
template<class CType >
bool setValidValues (const std::vector< std::pair< CType, CType > > &validValues)
 
template<class CType >
bool setValue (const CType &value)
 
bool setValue (const std::vector< CCopasiParameter * > &value)
 
virtual ~CCopasiParameter ()
 
- Public Member Functions inherited from CDataContainer
virtual bool add (CDataObject *pObject, const bool &adopt=true)
 
virtual bool appendDeletedDependentData (CUndoData &undoData) const
 
 CDataContainer (const CDataContainer &src, const CDataContainer *pParent)
 
 CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)
 
virtual std::string getChildObjectUnits (const CDataObject *pObject) const
 
void getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const
 
virtual objectMapgetObjects ()
 
virtual const objectMapgetObjects () const
 
virtual const std::string getUnits () const override
 
virtual const CDataObjectgetValueObject () const override
 
void objectRenamed (CDataObject *pObject, const std::string &oldName)
 
virtual ~CDataContainer ()
 
- Public Member Functions inherited from CDataObject
void addIssue (const CIssue &issue)
 
void addReference (const CDataContainer *pReference)
 
virtual void calculateValue () override
 
 CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL)
 
virtual void destruct () override
 
virtual const CDataObjectgetDataObject () const override
 
CDataContainergetObjectAncestor (const std::string &type) const
 
CDataModelgetObjectDataModel () const
 
const CObjectInterfacegetObjectFromCN (const CCommonName &cn) const
 
const std::string & getObjectName () const
 
CDataContainergetObjectParent () const
 
const std::string & getObjectType () const
 
virtual const CObjectInterface::ObjectSetgetPrerequisites () const override
 
virtual const CValiditygetValidity () const override
 
bool hasFlag (const Flag &flag) const
 
virtual bool isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override
 
bool prerequisitsContains (const DataObjectSet &objects) const
 
void removeIssue (const CIssue &issue)
 
void removeReference (const CDataContainer *pReference)
 
bool setObjectName (const std::string &name)
 
void validityChanged (const CValidity &changedValidity) override
 
void validityRemoved (const CValidity &changedValidity)
 
virtual ~CDataObject ()
 
- Public Member Functions inherited from CObjectInterface
 CObjectInterface ()
 
 CObjectInterface (const CObjectInterface &src)
 
virtual ~CObjectInterface ()
 
- Public Member Functions inherited from CUndoObjectInterface
 CUndoObjectInterface ()
 
 CUndoObjectInterface (const CUndoObjectInterface &src)
 
bool generateUuid ()
 
const xg::Guid & getUuid () const
 
bool setUuid (const std::string &uuid)
 
bool setUuid (const xg::Guid &uuid)
 
virtual ~CUndoObjectInterface ()
 

Static Public Member Functions

static bool CalculateKernel (CMatrix< C_INT64 > &matrix, CMatrix< C_INT64 > &kernel, CVector< size_t > &rowPivot)
 
static void GCD (C_INT64 &m, C_INT64 &n)
 
- Static Public Member Functions inherited from CCopasiParameter
static void allocateValidValues (const Type &type, void *&pValidValues)
 
static void allocateValue (const Type &type, void *&pValue)
 
static void assignValue (const Type &type, void *&pValue, const void *pNewValue)
 
static void deleteValidValues (const Type &type, void *&pValidValues)
 
static void deleteValue (const Type &type, void *&pValue)
 
static CCopasiParameterfromData (const CData &data, CUndoObjectInterface *pParent)
 
- Static Public Member Functions inherited from CDataContainer
static CDataContainerfromData (const CData &data, CUndoObjectInterface *pParent)
 
- Static Public Member Functions inherited from CDataObject
static CDataObjectfromData (const CData &data, CUndoObjectInterface *pParent)
 
static void sanitizeObjectName (std::string &name)
 
- Static Public Member Functions inherited from CObjectInterface
static const CDataObjectDataObject (const CObjectInterface *pInterface)
 
static CObjectInterfaceGetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName)
 
- Static Public Member Functions inherited from CUndoObjectInterface
template<class CType >
static CType * fromData (const CData &, CUndoObjectInterface *)
 

Protected Attributes

bool mContinueCombination
 
CMatrix< C_INT64mExpandedStoiTranspose
 
size_t mhProgressCounter
 
size_t mhProgressCounter2
 
size_t mMinimumSetSize
 
std::vector< CStepMatrixColumn * > mNewColumns
 
const CModelmpModel
 
CBitPatternTreempNullTree
 
unsigned C_INT32 mProgressCounter
 
unsigned C_INT32 mProgressCounter2
 
unsigned C_INT32 mProgressCounter2Max
 
unsigned C_INT32 mProgressCounterMax
 
CStepMatrixmpStepMatrix
 
std::vector< std::pair< size_t, bool > > mReactionForward
 
CVector< size_t > mReactionPivot
 
size_t mStep
 
- Protected Attributes inherited from CEFMMethod
std::vector< CFluxMode > * mpFluxModes
 
std::vector< const CReaction * > * mpReorderedReactions
 
- Protected Attributes inherited from CCopasiMethod
CMathContainermpContainer
 
CProcessReportLevel mProcessReport
 
- Protected Attributes inherited from CCopasiParameter
std::string mKey
 
void * mpDefault
 
void * mpValidValues
 
void * mpValue
 
CDataObjectmpValueReference
 
UserInterfaceFlag mUserInterfaceFlag
 
- Protected Attributes inherited from CDataContainer
objectMap mObjects
 
- Protected Attributes inherited from CDataObject
ObjectSet mPrerequisits
 
std::set< CDataContainer * > mReferences
 
- Protected Attributes inherited from CObjectInterface
CValidity mValidity
 

Private Member Functions

void addMode (const CFluxMode &mode)
 
void buildFluxModes ()
 
void buildKernelMatrix (CMatrix< C_INT64 > &kernel)
 
 CBitPatternTreeMethod ()
 
void combine (const CBitPatternTreeNode *pPositive, const CBitPatternTreeNode *pNegative)
 
void findRemoveInvalidColumns (const std::vector< CStepMatrixColumn * > &nullColumns)
 
void getUnsetBitIndexes (const CStepMatrixColumn *pColumn, CVector< size_t > &indexes) const
 
void initObjects ()
 

Additional Inherited Members

- Public Types inherited from CCopasiParameterGroup
typedef CDataObjectMap::const_type_iterator< CCopasiParameterconst_name_iterator
 
typedef std::vector< CCopasiParameter * > elements
 
typedef elements::iterator index_iterator
 
typedef CDataObjectMap::type_iterator< CCopasiParametername_iterator
 
- Public Types inherited from CCopasiParameter
enum class  eUserInterfaceFlag { editable , basic , unsupported , __SIZE }
 
enum class  Type {
  DOUBLE = 0 , UDOUBLE , INT , UINT ,
  BOOL , GROUP , STRING , CN ,
  KEY , FILE , EXPRESSION , INVALID ,
  __SIZE
}
 
typedef CFlags< eUserInterfaceFlagUserInterfaceFlag
 
- Public Types inherited from CDataContainer
typedef CDataObjectMap objectMap
 
- Public Types inherited from CDataObject
typedef std::set< const CDataObject * > DataObjectSet
 
enum  Flag {
  Container , Vector , Matrix , NameVector ,
  Reference , ValueBool , ValueInt , ValueInt64 ,
  ValueDbl , NonUniqueName , StaticString , ValueString ,
  Separator , DisplayName , ModelEntity , Array ,
  DataModel , Root , Gui , __SIZE
}
 
- Public Types inherited from CObjectInterface
typedef std::vector< const CDataContainer * > ContainerList
 
typedef std::set< const CObjectInterface * > ObjectSet
 
- Static Public Attributes inherited from CCopasiParameter
static const CEnumAnnotation< std::string, TypeTypeName
 
static const CEnumAnnotation< std::string, TypeXMLType
 
- Static Public Attributes inherited from CDataContainer
static const CObjectInterface::ContainerList EmptyList
 
- Protected Member Functions inherited from CCopasiMethod
 CCopasiMethod (const CCopasiMethod &src)
 
 CCopasiMethod (const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType)
 
virtual void signalMathContainerChanged ()
 
- Protected Member Functions inherited from CCopasiParameterGroup
 CCopasiParameterGroup ()
 
- Protected Member Functions inherited from CCopasiParameter
 CCopasiParameter (const CCopasiParameter &src)
 
- Protected Member Functions inherited from CDataContainer
template<class CType >
CDataMatrixReference< CType > * addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)
 
template<class CType >
CDataObjectReference< CType > * addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)
 
template<class CType >
CDataVectorReference< CType > * addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)
 
 CDataContainer (const CDataContainer &src)
 
void initObjects ()
 
- Protected Member Functions inherited from CDataObject
 CDataObject ()
 
 CDataObject (const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)
 

Constructor & Destructor Documentation

◆ CBitPatternTreeMethod() [1/3]

CBitPatternTreeMethod::CBitPatternTreeMethod ( )
private

Default constructor.

◆ CBitPatternTreeMethod() [2/3]

CBitPatternTreeMethod::CBitPatternTreeMethod ( const CDataContainer pParent,
const CTaskEnum::Method methodType = CTaskEnum::Method::EFMBitPatternTreeAlgorithm,
const CTaskEnum::Task taskType = CTaskEnum::Task::fluxMode 
)

Specific constructor

Parameters
constCDataContainer * pParent
constCTaskEnum::Method & methodType (default: EFMBitPatternTreeAlgorithm)
constCTaskEnum::Task & taskType (default: fluxMode)

References initObjects().

◆ CBitPatternTreeMethod() [3/3]

CBitPatternTreeMethod::CBitPatternTreeMethod ( const CBitPatternTreeMethod src,
const CDataContainer pParent 
)

Copy Constructor

Parameters
constCBitPatternTreeMethod & src

References initObjects().

◆ ~CBitPatternTreeMethod()

CBitPatternTreeMethod::~CBitPatternTreeMethod ( )

Destructor

References mpNullTree, and pdelete.

Member Function Documentation

◆ addMode()

void CBitPatternTreeMethod::addMode ( const CFluxMode mode)
private

Add the flux mode to the list only if the reversed does not exist

Parameters
constCFluxMode & mode

References CEFMMethod::mpFluxModes.

Referenced by buildFluxModes().

◆ buildFluxModes()

◆ buildKernelMatrix()

◆ calculate()

◆ CalculateKernel()

bool CBitPatternTreeMethod::CalculateKernel ( CMatrix< C_INT64 > &  matrix,
CMatrix< C_INT64 > &  kernel,
CVector< size_t > &  rowPivot 
)
static

A static method that calculates the kernel of a full column rank matrix. Note, the input matrix is used as work area and will be modified during the calculation.

Parameters
constCMatrix< C_INT64 > & matrix
CMatrix<C_INT64 > & kernel
CVector<size_t > & rowPivot
Returns
bool success

References abs64, CMatrix< CType >::array(), CVectorCore< CType >::array(), C_FLOAT64, C_INT64, GCD(), max, CMatrix< CType >::numCols(), CMatrix< CType >::numRows(), CMatrix< CType >::resize(), CVector< CType >::resize(), and CMatrix< CType >::size().

Referenced by buildFluxModes(), and buildKernelMatrix().

◆ combine()

◆ findRemoveInvalidColumns()

void CBitPatternTreeMethod::findRemoveInvalidColumns ( const std::vector< CStepMatrixColumn * > &  nullColumns)
private

Remove the invalid columns from the step matrix

Parameters
conststd::vector< CStepMatrix::iterator > & nullColumns

References CBitPatternTree::isExtremeRay(), mNewColumns, mpStepMatrix, and CStepMatrix::removeInvalidColumns().

Referenced by calculate().

◆ GCD()

static void CBitPatternTreeMethod::GCD ( C_INT64 m,
C_INT64 n 
)
inlinestatic

Calculate the greatest common divisor (GCD) of 2 positive integers. On return m and n contain the GCD

Parameters
C_INT64& m
C_INT64& n

Referenced by CalculateKernel(), and CStepMatrixColumn::CStepMatrixColumn().

◆ getUnsetBitIndexes()

void CBitPatternTreeMethod::getUnsetBitIndexes ( const CStepMatrixColumn pColumn,
CVector< size_t > &  indexes 
) const
private

Multiply values so that values contains only integers. Get the index of the unset bits of the flux mode.

References CVectorCore< CType >::array(), CStepMatrix::getUnsetBitIndexes(), mpStepMatrix, mReactionPivot, and CVectorCore< CType >::size().

Referenced by buildFluxModes().

◆ initialize()

◆ initObjects()

void CBitPatternTreeMethod::initObjects ( )
private

Initialize the needed CDataObjects.

References CDataContainer::addObjectReference(), mProgressCounter, and CDataObject::ValueInt.

Referenced by CBitPatternTreeMethod().

Member Data Documentation

◆ mContinueCombination

bool CBitPatternTreeMethod::mContinueCombination
protected

Boolean value indicating whether combination should continue.

Referenced by calculate(), combine(), and initialize().

◆ mExpandedStoiTranspose

CMatrix< C_INT64 > CBitPatternTreeMethod::mExpandedStoiTranspose
protected

The transpose of the expanded stoichiometry matrix.

Referenced by buildFluxModes(), and buildKernelMatrix().

◆ mhProgressCounter

size_t CBitPatternTreeMethod::mhProgressCounter
protected

Handle to the process report item "Current Step"

Referenced by calculate(), and initialize().

◆ mhProgressCounter2

size_t CBitPatternTreeMethod::mhProgressCounter2
protected

Handle to the process report item "Combination"

Referenced by calculate(), and combine().

◆ mMinimumSetSize

size_t CBitPatternTreeMethod::mMinimumSetSize
protected

The minimum set size use to determine whether a linear combination is allowed.

Referenced by combine(), and initialize().

◆ mNewColumns

std::vector< CStepMatrixColumn * > CBitPatternTreeMethod::mNewColumns
protected

A list of invalid columns currently in the step matrix

Referenced by combine(), and findRemoveInvalidColumns().

◆ mpModel

const CModel* CBitPatternTreeMethod::mpModel
protected

A pointer to the model which is analyzed.

Referenced by buildKernelMatrix(), and initialize().

◆ mpNullTree

CBitPatternTree* CBitPatternTreeMethod::mpNullTree
protected

The bit pattern tree for the current step

Referenced by calculate(), combine(), and ~CBitPatternTreeMethod().

◆ mProgressCounter

unsigned C_INT32 CBitPatternTreeMethod::mProgressCounter
protected

The current step used for process report.

Referenced by calculate(), initialize(), and initObjects().

◆ mProgressCounter2

unsigned C_INT32 CBitPatternTreeMethod::mProgressCounter2
protected

The current combination used for process report.

Referenced by calculate(), and combine().

◆ mProgressCounter2Max

unsigned C_INT32 CBitPatternTreeMethod::mProgressCounter2Max
protected

The max combination used for process report.

Referenced by calculate().

◆ mProgressCounterMax

unsigned C_INT32 CBitPatternTreeMethod::mProgressCounterMax
protected

The max step used for process report.

Referenced by calculate(), and initialize().

◆ mpStepMatrix

CStepMatrix* CBitPatternTreeMethod::mpStepMatrix
protected

A pointer to the step matrix for creating the flux modes

Referenced by buildFluxModes(), calculate(), combine(), findRemoveInvalidColumns(), getUnsetBitIndexes(), and initialize().

◆ mReactionForward

std::vector< std::pair< size_t, bool > > CBitPatternTreeMethod::mReactionForward
protected

A vector to recording the expansion of the stoichiometry matrix.

Referenced by buildFluxModes(), buildKernelMatrix(), and initialize().

◆ mReactionPivot

CVector< size_t > CBitPatternTreeMethod::mReactionPivot
protected

A vector recording the pivots for the QR factorization

Referenced by buildKernelMatrix(), and getUnsetBitIndexes().

◆ mStep

size_t CBitPatternTreeMethod::mStep
protected

The currently process step

Referenced by calculate().


The documentation for this class was generated from the following files: