#include <CLGroup.h>

Inheritance diagram for CLGroup:

Public Member Functions
void	addChildElement (const CLTransformation2D *pChild)

	CLGroup (CDataContainer *pParent=NULL)

	CLGroup (const CLGroup &source, CDataContainer *pParent=NULL)

	CLGroup (const RenderGroup &source, CDataContainer *pParent=NULL)

CLRenderCurve *	createCurve ()

CLEllipse *	createEllipse ()

CLGroup *	createGroup ()

CLImage *	createImage ()

CLPolygon *	createPolygon ()

CLRectangle *	createRectangle ()

CLText *	createText ()

CDataObject *	getElement (size_t n)

const CDataObject *	getElement (size_t n) const

const std::string &	getEndHead () const

const std::string &	getFontFamily () const

CLRelAbsVector &	getFontSize ()

const CLRelAbsVector &	getFontSize () const

CLText::FONT_STYLE	getFontStyle () const

CLText::FONT_WEIGHT	getFontWeight () const

const std::string &	getKey () const

CDataVector< CDataObject > *	getListOfElements ()

const CDataVector< CDataObject > *	getListOfElements () const

size_t	getNumElements () const

const std::string &	getStartHead () const

CLText::TEXT_ANCHOR	getTextAnchor () const

CLText::TEXT_ANCHOR	getVTextAnchor () const

bool	isSetEndHead () const

bool	isSetFontFamily () const

bool	isSetFontSize () const

bool	isSetFontStyle () const

bool	isSetFontWeight () const

bool	isSetStartHead () const

bool	isSetTextAnchor () const

bool	isSetVTextAnchor () const

void	setEndHead (const std::string &key)

void	setFontFamily (const std::string &family)

void	setFontSize (const CLRelAbsVector &size)

void	setFontStyle (CLText::FONT_STYLE style)

void	setFontWeight (CLText::FONT_WEIGHT weight)

void	setStartHead (const std::string &key)

void	setTextAnchor (CLText::TEXT_ANCHOR anchor)

void	setVTextAnchor (CLText::TEXT_ANCHOR anchor)

RenderGroup *	toSBML (unsigned int level, unsigned int version) const

	~CLGroup ()

Public Member Functions inherited from CLGraphicalPrimitive2D
virtual void	addSBMLAttributes (GraphicalPrimitive2D *pPrimitive) const

	CLGraphicalPrimitive2D ()

	CLGraphicalPrimitive2D (const GraphicalPrimitive2D &source)

const std::string &	getFillColor () const

FILL_RULE	getFillRule () const

bool	isSetFill () const

bool	isSetFillRule () const

void	setFillColor (const std::string &color)

void	setFillRule (FILL_RULE rule)

Public Member Functions inherited from CLGraphicalPrimitive1D
virtual void	addSBMLAttributes (GraphicalPrimitive1D *pPrimitive) const

	CLGraphicalPrimitive1D ()

	CLGraphicalPrimitive1D (const GraphicalPrimitive1D &source)

const std::vector< unsigned int > &	getDashArray () const

const std::string &	getStroke () const

double	getStrokeWidth () const

bool	isSetDashArray () const

bool	isSetStroke () const

bool	isSetStrokeWidth () const

void	parseDashArray (const std::string &s)

void	setDashArray (const std::vector< unsigned int > &array)

void	setStroke (const std::string &key)

void	setStrokeWidth (double width)

Public Member Functions inherited from CLTransformation2D
	CLTransformation2D ()

	CLTransformation2D (const double m[6])

	CLTransformation2D (const Transformation2D &source)

std::string	get2DTransformationString () const

const double *	getMatrix2D () const

virtual void	parseTransformation (const std::string &transformationString)

void	setMatrix (const double m[12])

void	setMatrix2D (const double m[6])

Public Member Functions inherited from CLTransformation
	CLTransformation ()

	CLTransformation (const double matrix[12])

std::string	get3DTransformationString () const

virtual const double *	getMatrix () const

bool	is2DTransformation () const

bool	isIdentityMatrix () const

bool	isSetMatrix () const

void	setMatrix (const double m[12])

Public Member Functions inherited from CLBase
	CLBase ()

	CLBase (const CLBase &b)

	CLBase (const SBase &)

const std::string &	getTag () const

bool	hasTag () const

virtual void	moveBy (const CLPoint &)

void	setTag (const std::string &tag)

virtual	~CLBase ()

Public Member Functions inherited from CDataContainer
virtual bool	add (CDataObject *pObject, const bool &adopt=true)

virtual bool	appendDeletedDependentData (CUndoData &undoData) const

virtual bool	applyData (const CData &data, CUndoData::CChangeSet &changes) override

	CDataContainer (const CDataContainer &src, const CDataContainer *pParent)

	CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)

virtual void	createUndoData (CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const override

virtual std::string	getChildObjectUnits (const CDataObject *pObject) const

void	getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const

virtual size_t	getIndex (const CDataObject *pObject) const

virtual const CObjectInterface *	getObject (const CCommonName &cn) const override

virtual objectMap &	getObjects ()

virtual const objectMap &	getObjects () const

virtual const std::string	getUnits () const override

virtual const CDataObject *	getValueObject () const override

virtual CUndoObjectInterface *	insert (const CData &data) override

void	objectRenamed (CDataObject *pObject, const std::string &oldName)

virtual bool	remove (CDataObject *pObject)

virtual CData	toData () const override

virtual	~CDataContainer ()

Public Member Functions inherited from CDataObject
void	addIssue (const CIssue &issue)

void	addReference (const CDataContainer *pReference)

virtual void	calculateValue () override

	CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL)

virtual void	destruct () override

virtual CCommonName	getCN () const override

virtual const CDataObject *	getDataObject () const override

CDataContainer *	getObjectAncestor (const std::string &type) const

CDataModel *	getObjectDataModel () const

virtual std::string	getObjectDisplayName () const override

const CObjectInterface *	getObjectFromCN (const CCommonName &cn) const

const std::string &	getObjectName () const

CDataContainer *	getObjectParent () const

const std::string &	getObjectType () const

virtual const CObjectInterface::ObjectSet &	getPrerequisites () const override

virtual const CValidity &	getValidity () const override

virtual void *	getValuePointer () const override

bool	hasFlag (const Flag &flag) const

virtual bool	isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override

bool	prerequisitsContains (const DataObjectSet &objects) const

virtual void	print (std::ostream *ostream) const override

void	removeIssue (const CIssue &issue)

void	removeReference (const CDataContainer *pReference)

bool	setObjectName (const std::string &name)

virtual bool	setObjectParent (const CDataContainer *pParent)

void	validityChanged (const CValidity &changedValidity) override

void	validityRemoved (const CValidity &changedValidity)

virtual	~CDataObject ()

Public Member Functions inherited from CObjectInterface
	CObjectInterface ()

	CObjectInterface (const CObjectInterface &src)

virtual	~CObjectInterface ()

Public Member Functions inherited from CUndoObjectInterface
	CUndoObjectInterface ()

	CUndoObjectInterface (const CUndoObjectInterface &src)

bool	generateUuid ()

const xg::Guid &	getUuid () const

bool	setUuid (const std::string &uuid)

bool	setUuid (const xg::Guid &uuid)

virtual void	updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject)

virtual	~CUndoObjectInterface ()

Protected Attributes
CDataVector< CDataObject >	mElements

std::string	mEndHead

std::string	mFontFamily

CLRelAbsVector	mFontSize

CLText::FONT_STYLE	mFontStyle

CLText::FONT_WEIGHT	mFontWeight

std::string	mKey

std::string	mStartHead

CLText::TEXT_ANCHOR	mTextAnchor

CLText::TEXT_ANCHOR	mVTextAnchor

Protected Attributes inherited from CLGraphicalPrimitive2D
std::string	mFill

FILL_RULE	mFillRule

Protected Attributes inherited from CLGraphicalPrimitive1D
std::string	mStroke

std::vector< unsigned int >	mStrokeDashArray

double	mStrokeWidth

Protected Attributes inherited from CLTransformation2D
double	mMatrix2D [6]

Protected Attributes inherited from CLTransformation
double	mMatrix [12]

Protected Attributes inherited from CLBase
std::string	mTag

Protected Attributes inherited from CDataContainer
objectMap	mObjects

Protected Attributes inherited from CDataObject
ObjectSet	mPrerequisits

std::set< CDataContainer * >	mReferences

Protected Attributes inherited from CObjectInterface
CValidity	mValidity

Private Member Functions
CLGroup &	operator= (const CLGroup &source)

Additional Inherited Members
Public Types inherited from CLGraphicalPrimitive2D
enum	FILL_RULE { UNSET , NONZERO , EVENODD , INHERIT }

Public Types inherited from CDataContainer
typedef CDataObjectMap	objectMap

Public Types inherited from CDataObject
typedef std::set< const CDataObject * >	DataObjectSet

enum	Flag { Container , Vector , Matrix , NameVector , Reference , ValueBool , ValueInt , ValueInt64 , ValueDbl , NonUniqueName , StaticString , ValueString , Separator , DisplayName , ModelEntity , Array , DataModel , Root , Gui , __SIZE }

Public Types inherited from CObjectInterface
typedef std::vector< const CDataContainer * >	ContainerList

typedef std::set< const CObjectInterface * >	ObjectSet

Static Public Member Functions inherited from CLTransformation2D
static const double *	getIdentityMatrix2D ()

Static Public Member Functions inherited from CLTransformation
static const double *	getIdentityMatrix ()

Static Public Member Functions inherited from CDataContainer
static CDataContainer *	fromData (const CData &data, CUndoObjectInterface *pParent)

Static Public Member Functions inherited from CDataObject
static CDataObject *	fromData (const CData &data, CUndoObjectInterface *pParent)

static void	sanitizeObjectName (std::string &name)

Static Public Member Functions inherited from CObjectInterface
static const CDataObject *	DataObject (const CObjectInterface *pInterface)

static CObjectInterface *	GetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName)

Static Public Member Functions inherited from CUndoObjectInterface
template<class CType >
static CType *	fromData (const CData &, CUndoObjectInterface *)

Static Public Attributes inherited from CLTransformation2D
static const double	IDENTITY2D [6] = {1.0, 0.0, 0.0, 1.0, 0.0, 0.0}

Static Public Attributes inherited from CLTransformation
static const double	IDENTITY3D [12] = {1.0, 0.0, 0.0, 0.0, 1.0, 0.0, 0.0, 0.0, 1.0, 0.0, 0.0, 0.0}

Static Public Attributes inherited from CDataContainer
static const CObjectInterface::ContainerList	EmptyList

Protected Member Functions inherited from CLTransformation2D
virtual void	addSBMLAttributes (Transformation2D *pTransformation) const

void	updateMatrix2D ()

void	updateMatrix3D ()

Protected Member Functions inherited from CDataContainer
template<class CType >
CDataMatrixReference< CType > *	addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

template<class CType >
CDataObjectReference< CType > *	addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

template<class CType >
CDataVectorReference< CType > *	addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)

	CDataContainer (const CDataContainer &src)

void	initObjects ()

Protected Member Functions inherited from CDataObject
	CDataObject ()

	CDataObject (const std::string &name, const CDataContainer pParent=static_cast< CDataContainer >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)

Constructor & Destructor Documentation

◆ CLGroup() [1/3]

CLGroup::CLGroup ( CDataContainer * pParent = NULL )

Constructor.

References CKeyFactory::add(), CRootContainer::getKeyFactory(), and mKey.

Referenced by addChildElement(), CLGroup(), and createGroup().

◆ CLGroup() [2/3]

CLGroup::CLGroup	(	const CLGroup &	source,
		CDataContainer *	pParent = `NULL`
	)

Copy constructor.

References CDataVector< CType >::add(), CKeyFactory::add(), CLGroup(), CRootContainer::getKeyFactory(), mElements, mKey, and CDataVector< CType >::size().

◆ CLGroup() [3/3]

CLGroup::CLGroup	(	const RenderGroup &	source,
		CDataContainer *	pParent = `NULL`
	)

Constructor to generate object from the corresponding SBML object.

References CDataVector< CType >::add(), CKeyFactory::add(), CLText::ANCHOR_BOTTOM, CLText::ANCHOR_END, CLText::ANCHOR_MIDDLE, CLText::ANCHOR_START, CLText::ANCHOR_TOP, CLText::ANCHOR_UNSET, CLGroup(), CRootContainer::getKeyFactory(), mElements, mKey, setFontStyle(), setFontWeight(), setTextAnchor(), setVTextAnchor(), CLText::STYLE_ITALIC, CLText::STYLE_NORMAL, CLText::STYLE_UNSET, CLText::WEIGHT_BOLD, CLText::WEIGHT_NORMAL, and CLText::WEIGHT_UNSET.

◆ ~CLGroup()

CLGroup::~CLGroup ( )

Destructor.

Destructor

References CRootContainer::getKeyFactory(), mKey, and CKeyFactory::remove().

Member Function Documentation

◆ addChildElement()

void CLGroup::addChildElement ( const CLTransformation2D * pChild )

Adds a copy of the given element to the end of the list of children elements.

References CDataVector< CType >::add(), CLGroup(), and mElements.

Referenced by GroupHandler::processEnd().

◆ createCurve()

CLRenderCurve * CLGroup::createCurve ( )

Creates a curve object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ createEllipse()

CLEllipse * CLGroup::createEllipse ( )

Creates an ellipse object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ createGroup()

CLGroup * CLGroup::createGroup ( )

Creates an image object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), CLGroup(), and mElements.

◆ createImage()

CLImage * CLGroup::createImage ( )

Creates an image object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ createPolygon()

CLPolygon * CLGroup::createPolygon ( )

Creates a polygon object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ createRectangle()

CLRectangle * CLGroup::createRectangle ( )

Creates a rectangle object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ createText()

CLText * CLGroup::createText ( )

Creates a text object and adds it to the end of the list of child elements.

References CDataVector< CType >::add(), and mElements.

◆ getElement() [1/2]

CDataObject * CLGroup::getElement ( size_t n )

Returns element with index n. If there is no such element, NULL is returned.

References mElements, and CDataVector< CType >::size().

Referenced by CLLayoutRenderer::draw_group(), CCopasiXML::saveGroupElement(), and CLLayoutRenderer::update_textures_and_colors().

◆ getElement() [2/2]

const CDataObject * CLGroup::getElement ( size_t n ) const

Returns element with index n. If there is no such element, NULL is returned.

References mElements, and CDataVector< CType >::size().

◆ getEndHead()

const std::string & CLGroup::getEndHead ( ) const

Returns the end head id.

References mEndHead.

Referenced by CLLayoutRenderer::update_textures_and_colors().

◆ getFontFamily()

const std::string & CLGroup::getFontFamily ( ) const

Returns the font family.

References mFontFamily.

Referenced by CLLayoutRenderer::getFontSpec(), and toSBML().

◆ getFontSize() [1/2]

CLRelAbsVector & CLGroup::getFontSize ( )

Returns the font size.

References mFontSize.

Referenced by CLLayoutRenderer::getFontSpec(), and toSBML().

◆ getFontSize() [2/2]

const CLRelAbsVector & CLGroup::getFontSize ( ) const

Returns the font size.

References mFontSize.

◆ getFontStyle()

CLText::FONT_STYLE CLGroup::getFontStyle ( ) const

Returns the font style.

References mFontStyle.

Referenced by CLLayoutRenderer::getFontSpec(), and toSBML().

◆ getFontWeight()

CLText::FONT_WEIGHT CLGroup::getFontWeight ( ) const

Returns the font weight.

References mFontWeight.

Referenced by CLLayoutRenderer::getFontSpec(), and toSBML().

◆ getKey()

const std::string & CLGroup::getKey ( ) const

virtual

Returns the key string of the object.

Returns the key of the color definition.

Reimplemented from CDataObject.

References mKey.

◆ getListOfElements() [1/2]

CDataVector< CDataObject > * CLGroup::getListOfElements ( )

Returns the list of elements.

References mElements.

◆ getListOfElements() [2/2]

const CDataVector< CDataObject > * CLGroup::getListOfElements ( ) const

Returns the list of elements.

References mElements.

◆ getNumElements()

size_t CLGroup::getNumElements ( ) const

Returns the number of elements in the group.

References mElements, and CDataVector< CType >::size().

Referenced by CLLayoutRenderer::draw_group(), CCopasiXML::saveGroupElement(), and CLLayoutRenderer::update_textures_and_colors().

◆ getStartHead()

const std::string & CLGroup::getStartHead ( ) const

Returns the start head id.

References mStartHead.

Referenced by CLLayoutRenderer::update_textures_and_colors().

◆ getTextAnchor()

CLText::TEXT_ANCHOR CLGroup::getTextAnchor ( ) const

Returns the text anchor.

References mTextAnchor.

Referenced by toSBML().

◆ getVTextAnchor()

CLText::TEXT_ANCHOR CLGroup::getVTextAnchor ( ) const

Returns the vertical text anchor.

References mVTextAnchor.

Referenced by toSBML().

◆ isSetEndHead()

bool CLGroup::isSetEndHead ( ) const

Returns true if the start head is set or false otherwise.

References mEndHead.

Referenced by StyleHandler::processEnd(), and CLLayoutRenderer::update_textures_and_colors().

◆ isSetFontFamily()

bool CLGroup::isSetFontFamily ( ) const

Returns true if the font family has been set or false otherwise.

References mFontFamily.

Referenced by CLLayoutRenderer::getFontSpec(), and StyleHandler::processEnd().

◆ isSetFontSize()

bool CLGroup::isSetFontSize ( ) const

Returns true if the font size has been set or false otherwise.

References CLRelAbsVector::getAbsoluteValue(), and mFontSize.

Referenced by CLLayoutRenderer::getFontSpec().

◆ isSetFontStyle()

bool CLGroup::isSetFontStyle ( ) const

Returns true if the font style has been set or false otherwise.

References mFontStyle, and CLText::STYLE_UNSET.

Referenced by CLLayoutRenderer::getFontSpec(), and StyleHandler::processEnd().

◆ isSetFontWeight()

bool CLGroup::isSetFontWeight ( ) const

Returns true if the font weight has been set or false otherwise.

References mFontWeight, and CLText::WEIGHT_UNSET.

Referenced by CLLayoutRenderer::getFontSpec(), and StyleHandler::processEnd().

◆ isSetStartHead()

bool CLGroup::isSetStartHead ( ) const

Returns true if the start head is set or false otherwise.

References mStartHead.

Referenced by StyleHandler::processEnd(), and CLLayoutRenderer::update_textures_and_colors().

◆ isSetTextAnchor()

bool CLGroup::isSetTextAnchor ( ) const

Returns true if the horizonal alignment attribute has been set.

This methods imports a curve in the old format into the new format. Since the old curves could have gaps, the original curve might have to be split into several new curves. void CLGroup::importOldCurve(const XMLNode& node) { const XMLAttributes& curveAttributes=node.getAttributes(); const XMLNode* child; size_t n=0,nMax = node.getNumChildren(); const XMLNode* pOrigAnnotation=NULL; const XMLNode* pOrigNotes=NULL; while(n<nMax) { child=&node.getChild(n); std::string childName=child->getName(); if(childName=="listOfCurveSegments") { size_t i,iMax=child->getNumChildren(); const XMLNode* child2=NULL; CLRenderPoint start; CLRenderPoint end; CLRenderPoint lastEnd; CLRenderPoint bp1; CLRenderPoint bp2; bool startSet=false; bool endSet=false; bool bp1Set=false; bool bp2Set=false; std::string childName2; CLRenderCurve* pCurve=new CLRenderCurve(); read the attributes pCurve->Transformation2D::readAttributes(curveAttributes); pCurve->GraphicalPrimitive1D::readAttributes(curveAttributes); pCurve->readAttributes(curveAttributes); for(i=0;i<iMax;++i) { child2=&child->getChild(i); childName2=child2->getName(); if(childName2=="curveSegment") { startSet=false; endSet=false; bp1Set=false; bp2Set=false; const XMLAttributes& innerAttributes=child2->getAttributes(); int typeIndex=innerAttributes.getIndex("type"); if(typeIndex==-1 || innerAttributes.getURI(typeIndex)!="http://www.w3.org/2001/XMLSchema-instance") { continue; } size_t j,jMax=child2->getNumChildren(); for(j=0;j<jMax;++j) { const XMLNode* child3=&child2->getChild(j); std::string childName3=child3->getName(); if(childName3=="start") { start=CLRenderPoint(<em>child3); startSet=true; } add the basepoints and the endpoint else if(childName3=="end") { end=CLRenderPoint(*child3); endSet=true; } else if(innerAttributes.getValue(typeIndex)=="CubicBezier" && childName3=="basePoint1") { bp1=CLRenderPoint(*child3); bp1Set=true; } else if(innerAttributes.getValue(typeIndex)=="CubicBezier" && childName3=="basePoint2") { bp2=CLRenderPoint(*child3); bp2Set=true; } } if(!startSet || !endSet) { skip this point TODO this is an error continue; } if(pCurve->getNumElements()==0) { add the start point pCurve->addCurveElement(&start); } else { check if start is identical to lastEnd if not, we have to start a new curve if(!(start == lastEnd)) { if(pCurve->getNumElements() > 1) { add the curve to the goup this->mElements.add(pCurve,true); } else { delete pCurve; } we have do clear the endHead on the preceeding curve pCurve->setEndHead("none"); pCurve=new CLRenderCurve(); read the attributes pCurve->Transformation2D::readAttributes(curveAttributes); pCurve->GraphicalPrimitive1D::readAttributes(curveAttributes); pCurve->readAttributes(curveAttributes); we have to clear the start head on this curve pCurve->setStartHead("none"); pCurve->addCurveElement(&start); } } if(innerAttributes.getValue(typeIndex)=="CubicBezier") { if(!bp1Set) { if(bp2Set) { basepoint1 is the same as basepoint2 bp1=bp2; } else { bp1=CLRenderPoint(CLRelAbsVector((start.x().getAbsoluteValue()+end.x().getAbsoluteValue())/2.0,(start.x().getRelativeValue()+end.x().getRelativeValue())/2.0) ,CLRelAbsVector((start.y().getAbsoluteValue()+end.y().getAbsoluteValue())/2.0,(start.y().getRelativeValue()+end.y().getRelativeValue())/2.0) ,CLRelAbsVector((start.z().getAbsoluteValue()+end.z().getAbsoluteValue())/2.0,(start.z().getRelativeValue()+end.z().getRelativeValue())/2.0) ); bp1Set=true; } } if(!bp2Set) { at this time bp1 has to be set bp2=bp1; } add the cubic bezier element CLRenderCubicBezier pBezier=new CLRenderCubicBezier(bp1.x(),bp1.y(),bp1.z(), bp2.x(),bp2.y(),bp2.z(), end.x(),end.y(),end.z()); pCurve->addCurveElement(pBezier); delete pBezier; lastEnd=end; } else { add the end point pCurve->addCurveElement(&end); lastEnd=end; } } } if(pCurve->getNumElements() > 1) { add the curve to the goup this->mElements.add(pCurve,true); } } else if(childName=="annotation") { pOrigAnnotation=child; } else if(childName=="notes") { pOrigNotes=child; } ++n; } } Returns true if the horizonal alignment attribute has been set.