COPASI API
4.40.278
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#include <CModified.h>
Public Member Functions | |
virtual bool | applyData (const CData &data, CUndoData::CChangeSet &changes) |
CModification (const CModification &src, const CDataContainer *pParent) | |
CModification (const CRDFTriplet &triplet, const std::string &objectName="", const CDataContainer *pParent=NO_PARENT) | |
CModification (const std::string &objectName, const CDataContainer *pParent=NO_PARENT) | |
virtual void | createUndoData (CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const |
virtual void | destruct () |
const std::string & | getDate () const |
virtual const std::string & | getKey () const |
const CRDFTriplet & | getTriplet () const |
void | setDate (const std::string &date) |
virtual CData | toData () const |
~CModification () | |
Public Member Functions inherited from CDataContainer | |
virtual bool | add (CDataObject *pObject, const bool &adopt=true) |
virtual bool | appendDeletedDependentData (CUndoData &undoData) const |
CDataContainer (const CDataContainer &src, const CDataContainer *pParent) | |
CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
virtual std::string | getChildObjectUnits (const CDataObject *pObject) const |
void | getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const |
virtual size_t | getIndex (const CDataObject *pObject) const |
virtual const CObjectInterface * | getObject (const CCommonName &cn) const override |
virtual objectMap & | getObjects () |
virtual const objectMap & | getObjects () const |
virtual const std::string | getUnits () const override |
virtual const CDataObject * | getValueObject () const override |
virtual CUndoObjectInterface * | insert (const CData &data) override |
void | objectRenamed (CDataObject *pObject, const std::string &oldName) |
virtual bool | remove (CDataObject *pObject) |
virtual | ~CDataContainer () |
Public Member Functions inherited from CDataObject | |
void | addIssue (const CIssue &issue) |
void | addReference (const CDataContainer *pReference) |
virtual void | calculateValue () override |
CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL) | |
virtual CCommonName | getCN () const override |
virtual const CDataObject * | getDataObject () const override |
CDataContainer * | getObjectAncestor (const std::string &type) const |
CDataModel * | getObjectDataModel () const |
virtual std::string | getObjectDisplayName () const override |
const CObjectInterface * | getObjectFromCN (const CCommonName &cn) const |
const std::string & | getObjectName () const |
CDataContainer * | getObjectParent () const |
const std::string & | getObjectType () const |
virtual const CObjectInterface::ObjectSet & | getPrerequisites () const override |
virtual const CValidity & | getValidity () const override |
virtual void * | getValuePointer () const override |
bool | hasFlag (const Flag &flag) const |
virtual bool | isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override |
bool | prerequisitsContains (const DataObjectSet &objects) const |
virtual void | print (std::ostream *ostream) const override |
void | removeIssue (const CIssue &issue) |
void | removeReference (const CDataContainer *pReference) |
bool | setObjectName (const std::string &name) |
virtual bool | setObjectParent (const CDataContainer *pParent) |
void | validityChanged (const CValidity &changedValidity) override |
void | validityRemoved (const CValidity &changedValidity) |
virtual | ~CDataObject () |
Public Member Functions inherited from CObjectInterface | |
CObjectInterface () | |
CObjectInterface (const CObjectInterface &src) | |
virtual | ~CObjectInterface () |
Public Member Functions inherited from CUndoObjectInterface | |
CUndoObjectInterface () | |
CUndoObjectInterface (const CUndoObjectInterface &src) | |
bool | generateUuid () |
const xg::Guid & | getUuid () const |
bool | setUuid (const std::string &uuid) |
bool | setUuid (const xg::Guid &uuid) |
virtual void | updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject) |
virtual | ~CUndoObjectInterface () |
Static Public Member Functions | |
static CModification * | fromData (const CData &data, CUndoObjectInterface *pParent) |
Static Public Member Functions inherited from CDataContainer | |
static CDataContainer * | fromData (const CData &data, CUndoObjectInterface *pParent) |
Static Public Member Functions inherited from CDataObject | |
static CDataObject * | fromData (const CData &data, CUndoObjectInterface *pParent) |
static void | sanitizeObjectName (std::string &name) |
Static Public Member Functions inherited from CObjectInterface | |
static const CDataObject * | DataObject (const CObjectInterface *pInterface) |
static CObjectInterface * | GetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName) |
Static Public Member Functions inherited from CUndoObjectInterface | |
template<class CType > | |
static CType * | fromData (const CData &, CUndoObjectInterface *) |
Private Attributes | |
std::string | mKey |
CRDFPredicate::Path | mNodePath |
CRDFTriplet | mTriplet |
Additional Inherited Members | |
Public Types inherited from CDataContainer | |
typedef CDataObjectMap | objectMap |
Public Types inherited from CDataObject | |
typedef std::set< const CDataObject * > | DataObjectSet |
enum | Flag { Container , Vector , Matrix , NameVector , Reference , ValueBool , ValueInt , ValueInt64 , ValueDbl , NonUniqueName , StaticString , ValueString , Separator , DisplayName , ModelEntity , Array , DataModel , Root , Gui , __SIZE } |
Public Types inherited from CObjectInterface | |
typedef std::vector< const CDataContainer * > | ContainerList |
typedef std::set< const CObjectInterface * > | ObjectSet |
Static Public Attributes inherited from CDataContainer | |
static const CObjectInterface::ContainerList | EmptyList |
Protected Member Functions inherited from CDataContainer | |
template<class CType > | |
CDataMatrixReference< CType > * | addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
template<class CType > | |
CDataObjectReference< CType > * | addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
template<class CType > | |
CDataVectorReference< CType > * | addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
CDataContainer (const CDataContainer &src) | |
void | initObjects () |
Protected Member Functions inherited from CDataObject | |
CDataObject () | |
CDataObject (const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
Protected Attributes inherited from CDataContainer | |
objectMap | mObjects |
Protected Attributes inherited from CDataObject | |
ObjectSet | mPrerequisits |
std::set< CDataContainer * > | mReferences |
Protected Attributes inherited from CObjectInterface | |
CValidity | mValidity |
CModified: Stores Modification dates.
CModification::CModification | ( | const std::string & | objectName, |
const CDataContainer * | pParent = NO_PARENT |
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Default constructor
const | std::string & objectName |
const | CDataContainer * pParent (default: NULL) |
CModification::CModification | ( | const CRDFTriplet & | triplet, |
const std::string & | objectName = "" , |
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const CDataContainer * | pParent = NO_PARENT |
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Specific constructor
const | CRDFTriplet & triplet |
const | std::string & objectName (default: "") |
const | CDataContainer * pParent (default: NULL) |
References CRDFNode::getPath(), mNodePath, mTriplet, and CRDFTriplet::pObject.
CModification::CModification | ( | const CModification & | src, |
const CDataContainer * | pParent | ||
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Copy constructor
const CModification & | src |
const | CDataContainer * pParent (default: NULL) |
CModification::~CModification | ( | ) |
Destructor
References CRootContainer::getKeyFactory(), mKey, and CKeyFactory::remove().
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virtual |
Apply the provided data to the object
const | CData & data |
Reimplemented from CDataContainer.
References CDataContainer::applyData(), CData::DATE, CDataObject::getObjectAncestor(), CData::getProperty(), CData::isSetProperty(), CMIRIAMInfo::save(), setDate(), and CDataValue::toString().
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Create the undo data which represents the changes recording the differences between the provided oldData and the current data.
CUndoData | & undoData |
const | CUndoData::Type & type |
const | CData & oldData (default: empty data) |
const | CCore::Framework & framework (default: CCore::Framework::ParticleNumbers) |
Reimplemented from CDataContainer.
References CUndoData::addProperty(), CUndoData::CHANGE, CDataContainer::createUndoData(), CData::DATE, CUndoData::empty(), getDate(), CData::getProperty(), CData::OBJECT_HASH, CData::OBJECT_INDEX, CUndoData::removeProperty(), and toData().
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virtual |
Destruct the object
Reimplemented from CDataObject.
References CDataObject::destruct(), CDataObject::getObjectAncestor(), CMIRIAMInfo::removeModification(), and CMIRIAMInfo::save().
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static |
Static method to create a CDataObject based on the provided data
const | CData & data |
References CMIRIAMInfo::createModification(), CDataObject::getObjectAncestor(), CData::getProperty(), CData::OBJECT_NAME, CDataContainer::remove(), and CDataValue::toString().
const std::string & CModification::getDate | ( | ) | const |
References CRDFPredicate::dcterms_W3CDTF, CRDFNode::getFieldValue(), mTriplet, and CRDFTriplet::pObject.
Referenced by createUndoData(), toData(), and CSBMLExporter::updateMIRIAMAnnotation().
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Reimplemented from CDataObject.
References mKey.
const CRDFTriplet & CModification::getTriplet | ( | ) | const |
References mTriplet.
Referenced by CMIRIAMInfo::removeModification().
void CModification::setDate | ( | const std::string & | date | ) |
References CRDFPredicate::dcterms_W3CDTF, mNodePath, mTriplet, CRDFTriplet::pObject, and CRDFNode::setFieldValue().
Referenced by applyData(), and CMIRIAMInfo::createModification().
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virtual |
Retrieve the data describing the object
Reimplemented from CDataContainer.
References CData::addProperty(), CData::DATE, getDate(), CData::hash(), CData::OBJECT_HASH, CData::OBJECT_INDEX, CData::removeProperty(), and CDataContainer::toData().
Referenced by createUndoData().
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private |
The key of the object needed for the copasi tables.
Referenced by getKey(), and ~CModification().
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private |
The predicate path to the node.
Referenced by CModification(), and setDate().
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private |
Triplet in the RDF graph representing the reference.
Referenced by CModification(), getDate(), getTriplet(), and setDate().