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COPASI API
4.40.278
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#include <CUnitDefinitionDB.h>
Public Member Functions | |
| virtual bool | add (const CUnitDefinition &src) |
| virtual bool | add (CUnitDefinition *src, bool adopt=false) |
| bool | appendDependentUnits (std::set< const CDataObject * > candidates, std::set< const CDataObject * > &dependentUnits) const |
| bool | changeSymbol (CUnitDefinition *pUnitDef, const std::string &symbol) |
| bool | containsSymbol (std::string symbol) const |
| CUnitDefinitionDB (const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT) | |
| std::vector< CUnit > | getAllValidUnits (const std::string &expression, const C_FLOAT64 &exponent) const |
| const CUnitDefinition * | getUnitDefFromSymbol (std::string symbol) const |
| std::string | quoteSymbol (const std::string &symbol) const |
| virtual bool | remove (CDataObject *pObject) |
| virtual void | remove (const size_t &index) |
| virtual void | remove (const std::string &name) |
| ~CUnitDefinitionDB () | |
Public Member Functions inherited from CDataVectorN< CUnitDefinition > | |
| virtual bool | add (CDataObject *pObject, const bool &adopt=true) |
| virtual bool | applyData (const CData &data, CUndoData::CChangeSet &changes) |
| CDataVectorN (const CDataVectorN< CUnitDefinition > &src, const CDataContainer *pParent) | |
| CDataVectorN (const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT) | |
| virtual void | createUndoData (CUndoData &undoData, const CUndoData::Type &, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const |
| void | createUniqueName (std::string &name) const |
| virtual size_t | getIndex (const std::string &name) const |
| virtual const CObjectInterface * | getObject (const CCommonName &name) const |
| CDataVectorN< CUnitDefinition > & | operator= (const std::vector< CUnitDefinition * > &rhs) |
| CUnitDefinition & | operator[] (const size_t &index) |
| const CUnitDefinition & | operator[] (const size_t &index) const |
| CUnitDefinition & | operator[] (const std::string &name) |
| const CUnitDefinition & | operator[] (const std::string &name) const |
| virtual CData | toData () const |
| virtual | ~CDataVectorN () |
Public Member Functions inherited from CDataVector< CType > | |
| virtual bool | add (const CType &src) |
| iterator | begin () |
| const_iterator | begin () const |
| name_iterator | beginName () |
| const_name_iterator | beginName () const |
| CDataVector (const CDataVector< CType > &src, const CDataContainer *pParent) | |
| CDataVector (const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT, const CFlags< Flag > &flag=CFlags< Flag >::None) | |
| virtual void | cleanup () |
| virtual void | clear () |
| void | deepCopy (const CDataVector< CType > &source) |
| virtual bool | empty () const |
| iterator | end () |
| const_iterator | end () const |
| name_iterator | endName () |
| const_name_iterator | endName () const |
| virtual size_t | getIndex (const CDataObject *pObject) const |
| virtual CUndoObjectInterface * | insert (const CData &data) |
| bool | operator!= (const CDataVector< CType > &rhs) |
| CDataVector< CType > & | operator= (const CDataVector< CType > &rhs) |
| CDataVector< CType > & | operator= (const std::vector< CType * > &rhs) |
| CType & | operator[] (const size_t &index) |
| const CType & | operator[] (const size_t &index) const |
| virtual void | resize (const size_t &newSize) |
| virtual size_t | size () const |
| virtual void | swap (const size_t &indexFrom, const size_t &indexTo) |
| virtual void | updateIndex (const size_t &index, const CUndoObjectInterface *pUndoObject) |
| virtual | ~CDataVector () |
Public Member Functions inherited from CDataContainer | |
| virtual bool | appendDeletedDependentData (CUndoData &undoData) const |
| CDataContainer (const CDataContainer &src, const CDataContainer *pParent) | |
| CDataContainer (const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
| virtual std::string | getChildObjectUnits (const CDataObject *pObject) const |
| void | getDescendants (CDataObject::DataObjectSet &descendants, const bool &recursive=false) const |
| virtual objectMap & | getObjects () |
| virtual const objectMap & | getObjects () const |
| virtual const std::string | getUnits () const override |
| virtual const CDataObject * | getValueObject () const override |
| void | objectRenamed (CDataObject *pObject, const std::string &oldName) |
| virtual | ~CDataContainer () |
Public Member Functions inherited from CDataObject | |
| void | addIssue (const CIssue &issue) |
| void | addReference (const CDataContainer *pReference) |
| virtual void | calculateValue () override |
| CDataObject (const CDataObject &src, const CDataContainer *pParent=NULL) | |
| virtual void | destruct () override |
| virtual CCommonName | getCN () const override |
| virtual const CDataObject * | getDataObject () const override |
| virtual const std::string & | getKey () const |
| CDataContainer * | getObjectAncestor (const std::string &type) const |
| CDataModel * | getObjectDataModel () const |
| virtual std::string | getObjectDisplayName () const override |
| const CObjectInterface * | getObjectFromCN (const CCommonName &cn) const |
| const std::string & | getObjectName () const |
| CDataContainer * | getObjectParent () const |
| const std::string & | getObjectType () const |
| virtual const CObjectInterface::ObjectSet & | getPrerequisites () const override |
| virtual const CValidity & | getValidity () const override |
| virtual void * | getValuePointer () const override |
| bool | hasFlag (const Flag &flag) const |
| virtual bool | isPrerequisiteForContext (const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override |
| bool | prerequisitsContains (const DataObjectSet &objects) const |
| virtual void | print (std::ostream *ostream) const override |
| void | removeIssue (const CIssue &issue) |
| void | removeReference (const CDataContainer *pReference) |
| bool | setObjectName (const std::string &name) |
| virtual bool | setObjectParent (const CDataContainer *pParent) |
| void | validityChanged (const CValidity &changedValidity) override |
| void | validityRemoved (const CValidity &changedValidity) |
| virtual | ~CDataObject () |
Public Member Functions inherited from CObjectInterface | |
| CObjectInterface () | |
| CObjectInterface (const CObjectInterface &src) | |
| virtual | ~CObjectInterface () |
Public Member Functions inherited from CUndoObjectInterface | |
| CUndoObjectInterface () | |
| CUndoObjectInterface (const CUndoObjectInterface &src) | |
| bool | generateUuid () |
| const xg::Guid & | getUuid () const |
| bool | setUuid (const std::string &uuid) |
| bool | setUuid (const xg::Guid &uuid) |
| virtual | ~CUndoObjectInterface () |
Private Member Functions | |
| void | replaceSymbol (const std::string &oldSymbol, const std::string &newSymbol) |
Private Attributes | |
| std::map< std::string, CUnitDefinition * > | mSymbolToUnitDefinitions |
Additional Inherited Members | |
Public Types inherited from CDataVectorN< CUnitDefinition > | |
| typedef CDataObjectMap::const_type_iterator< CUnitDefinition > | const_name_iterator |
| typedef CDataObjectMap::type_iterator< CUnitDefinition > | name_iterator |
Public Types inherited from CDataVector< CType > | |
| typedef CDataObjectMap::const_type_iterator< CType > | const_name_iterator |
| typedef CDataObjectMap::type_iterator< CType > | name_iterator |
Public Types inherited from CDataContainer | |
| typedef CDataObjectMap | objectMap |
Public Types inherited from CDataObject | |
| typedef std::set< const CDataObject * > | DataObjectSet |
| enum | Flag { Container , Vector , Matrix , NameVector , Reference , ValueBool , ValueInt , ValueInt64 , ValueDbl , NonUniqueName , StaticString , ValueString , Separator , DisplayName , ModelEntity , Array , DataModel , Root , Gui , __SIZE } |
Public Types inherited from CObjectInterface | |
| typedef std::vector< const CDataContainer * > | ContainerList |
| typedef std::set< const CObjectInterface * > | ObjectSet |
Static Public Member Functions inherited from CDataContainer | |
| static CDataContainer * | fromData (const CData &data, CUndoObjectInterface *pParent) |
Static Public Member Functions inherited from CDataObject | |
| static CDataObject * | fromData (const CData &data, CUndoObjectInterface *pParent) |
| static void | sanitizeObjectName (std::string &name) |
Static Public Member Functions inherited from CObjectInterface | |
| static const CDataObject * | DataObject (const CObjectInterface *pInterface) |
| static CObjectInterface * | GetObjectFromCN (const ContainerList &listOfContainer, const CCommonName &objName) |
Static Public Member Functions inherited from CUndoObjectInterface | |
| template<class CType > | |
| static CType * | fromData (const CData &, CUndoObjectInterface *) |
Static Public Attributes inherited from CDataContainer | |
| static const CObjectInterface::ContainerList | EmptyList |
Protected Member Functions inherited from CDataVector< CType > | |
| CDataVector (const CDataVector< CType > &src) | |
Protected Member Functions inherited from CDataContainer | |
| template<class CType > | |
| CDataMatrixReference< CType > * | addMatrixReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
| template<class CType > | |
| CDataObjectReference< CType > * | addObjectReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
| template<class CType > | |
| CDataVectorReference< CType > * | addVectorReference (const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) |
| CDataContainer (const CDataContainer &src) | |
| void | initObjects () |
Protected Member Functions inherited from CDataObject | |
| CDataObject () | |
| CDataObject (const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | |
Protected Attributes inherited from CDataContainer | |
| objectMap | mObjects |
Protected Attributes inherited from CDataObject | |
| ObjectSet | mPrerequisits |
| std::set< CDataContainer * > | mReferences |
Protected Attributes inherited from CObjectInterface | |
| CValidity | mValidity |
| CUnitDefinitionDB::CUnitDefinitionDB | ( | const std::string & | name = "NoName", |
| const CDataContainer * | pParent = NO_PARENT |
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| ) |
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inline |
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virtual |
Add a copy of the object to the end of the vector.
| const | CType & src |
Reimplemented from CDataVectorN< CUnitDefinition >.
References C_INVALID_INDEX, containsSymbol(), CDataVectorN< CUnitDefinition >::getIndex(), CDataObject::getObjectName(), and CUnitDefinition::getSymbol().
Referenced by CCopasiXML::mergeUnitDefinitions(), and UnitDefinitionHandler::processStart().
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virtual |
| bool CUnitDefinitionDB::appendDependentUnits | ( | std::set< const CDataObject * > | candidates, |
| std::set< const CDataObject * > & | dependentUnits | ||
| ) | const |
Appends pointers to units, which are dependent on any of the candidates to the list dependentUnits.
| std::set< | const CDataObject * > candidates |
| std::set< | const CDataObject * > & dependentUnits |
References CDataVector< CType >::begin(), CDataVector< CType >::end(), CUnitDefinition::getSymbol(), and CDataContainer::insert().
| bool CUnitDefinitionDB::changeSymbol | ( | CUnitDefinition * | pUnitDef, |
| const std::string & | symbol | ||
| ) |
References CDataObject::getObjectParent(), CUnitDefinition::getSymbol(), mSymbolToUnitDefinitions, and replaceSymbol().
Referenced by CUnitDefinition::setSymbol().
| bool CUnitDefinitionDB::containsSymbol | ( | std::string | symbol | ) | const |
References mSymbolToUnitDefinitions.
Referenced by add(), CUnit::filterUsedSymbols(), CCopasiXML::mergeUnitDefinitions(), and CUnitDefinition::operator=().
| const CUnitDefinition * CUnitDefinitionDB::getUnitDefFromSymbol | ( | std::string | symbol | ) | const |
References mSymbolToUnitDefinitions, and unQuote().
Referenced by getAllValidUnits(), CRootContainer::getUnitDefFromSymbol(), and quoteSymbol().
| std::string CUnitDefinitionDB::quoteSymbol | ( | const std::string & | symbol | ) | const |
References getUnitDefFromSymbol(), and quote().
Referenced by CRootContainer::quoteUnitDefSymbol().
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virtual |
Removes the pointer to the object, from the vector
| CDataObject | * pObject |
Reimplemented from CDataVector< CType >.
References CUnitDefinition::getSymbol(), mSymbolToUnitDefinitions, and CDataVector< CType >::remove().
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virtual |
Removes the index-th element from the vector
| const | size_t & index |
Reimplemented from CDataVector< CType >.
Referenced by remove().
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virtual |
Remove the object with the given name from the vector.
| const | std::string & name |
Reimplemented from CDataVectorN< CUnitDefinition >.
References remove().
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private |
Replace all old symbols with new symbols in the unit definition DB
| const | std::string & oldSymbol |
| const | std::string & newSymbol |
References CDataVector< CType >::begin(), CDataVector< CType >::end(), CDataObject::getObjectParent(), CRootContainer::getRoot(), and CRootContainer::replaceSymbol().
Referenced by changeSymbol().
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private |
Referenced by add(), changeSymbol(), containsSymbol(), getUnitDefFromSymbol(), and remove().