COPASI 4.35 (Build 258)

Version 4.35.258

Release Date: March 15, 2022

Bug Fixes since COPASI 4.34 (Build 251)

• Graphical User Interface (CopasiUI)
  • Fixed problem merging models using global quantities in mathematical expressions.
  • Fixed problem changing a reaction parameter pointing to a global quantity back to a fixed value.
  • Fixed problem when plotting multiple experimental data when the numbers of data points differed in the data sets.
  • Fixed crash when entering an invalid math expression of the form: a = b
  • Improved support of dark themes.
• Simulation Engine
  • Fixed encoding of expression using a function which name includes a backslash \.
  • Fixed problem running running optimization using a scan, sensitivities, or cross section task to calculate the objective function.
  • Fixed calculation event delays which uses an expression only containing fixed objects.
  • Improved steady state rate criterion to correctly handle constant rates for variables with large values.
  • Fixed restoring the model state after a failed steady state calculation
• Standards
  • SEDML: Fixed export of time course of non autonomous models with an initial time different from 0.
  • SBML: Fixed crash occurring when consecutively importing models using functions with the same name and expression but different parameter type.
  • SBML: Fixed import of models including species with an invalid SBML id (e.g. 2.8.1.8).
• Language Bindings
  • Fixed crash occurring when converting compiling an initial expression which is derived from an invalid expression.
• Installation
  • Linux: Improved installation to correctly handle file association (mime types) and URL handlers.
  • Mac OS X: Provide packages (arm and Intel) for Monterey to resolve UI issues.