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Agenda

Agenda

Monday, July 18 2011
  8:15 Registration and Breakfast
  9:00 Morning Session
12:00 Lunch
13:00 Afternoon Session I
14:30 Break
14:45 Afternoon Session II

Tuesday, July 19 2011
  8:15 Breakfast
  9:00 Morning Session
12:00 Lunch
13:00 Afternoon Session I
14:30 Break
14:45 Afternoon Session II

Wednesday, July 20 2011
  8:15 Breakfast
  9:00 Morning Session
12:00 Lunch
13:00 Afternoon Session I
14:30 Break
14:45 Afternoon Session II

Topics

  • Modeling Biochemical Networks with ODEs
  • Trajectories (Plotting Time Courses, Reports, Sliders)
  • Steady States (Newton Method, Trajectory, Stability Analysis)
  • Scan (Reports, Plotting)
  • Optimization
  • Parameter Estimation
  • Sensitivity
  • Stochastic Simulation (with introduction)
  • Batch processing, command line
  • Discrete Events