COPASI API  4.40.278
Static Public Member Functions | List of all members
ResultParser Class Reference

#include <CParameterEstimationUtils.h>

Static Public Member Functions

static std::vector< ResultData * > fromFile (const std::string &fileName, CDataModel *dataModel=NULL)
 
static std::string & ltrim (std::string &s)
 
static std::vector< ResultData * > parseContent (const std::string &content)
 
static std::vector< ResultData * > parseFile (const std::string &fileName, CDataModel *dataModel=NULL)
 
static FittingItem * parseItem (const std::string &line)
 
static std::vector< ResultData * > parseStream (std::istream &reader, CDataModel *dataModel=NULL)
 
static CheckPoint * parseValue (const std::string &line)
 
static std::vector< FittingItem * > readItems (std::istream &reader, bool &flag)
 
static std::vector< CheckPoint * > readValues (std::istream &reader)
 
static std::string & rtrim (std::string &s)
 
static double saveToDouble (const std::string &doubleString, double defaultValue=0)
 
static bool skipTo (std::istream &reader, const std::string &lineStart)
 
static bool skipTo (std::istream &reader, const std::string &lineStart, bool &flag, bool(*eval)(const std::string &)=NULL)
 
static std::vector< std::string > split (const std::string &s, char delim, bool removeEmpty=true)
 
static std::vector< std::string > & split (const std::string &s, char delim, std::vector< std::string > &elems, bool removeEmpty=true)
 
static std::vector< std::string > & split (const std::string &s, const std::string &delims, std::vector< std::string > &elems)
 
static int toInt32 (const std::string &str)
 
static std::string trim (const std::string &s1)
 
static std::string & trim_in_place (std::string &s)
 

Member Function Documentation

◆ fromFile()

std::vector< ResultData * > ResultParser::fromFile ( const std::string &  fileName,
CDataModel *  dataModel = NULL 
)
static

References parseFile().

◆ ltrim()

std::string & ResultParser::ltrim ( std::string &  s)
inlinestatic

Referenced by trim(), and trim_in_place().

◆ parseContent()

std::vector< ResultData * > ResultParser::parseContent ( const std::string &  content)
static

References parseStream().

◆ parseFile()

std::vector< ResultData * > ResultParser::parseFile ( const std::string &  fileName,
CDataModel *  dataModel = NULL 
)
static

References parseStream().

Referenced by fromFile().

◆ parseItem()

FittingItem * ResultParser::parseItem ( const std::string &  line)
static

References FittingItem::mLowerBound, FittingItem::mName, FittingItem::mStartValue, FittingItem::mUpperBound, sanitizeName(), saveToDouble(), and trim().

Referenced by readItems().

◆ parseStream()

std::vector< ResultData * > ResultParser::parseStream ( std::istream &  reader,
CDataModel *  dataModel = NULL 
)
static

References readItems(), and readValues().

Referenced by parseContent(), and parseFile().

◆ parseValue()

CheckPoint * ResultParser::parseValue ( const std::string &  line)
static

References CheckPoint::mBestValue, CheckPoint::mFunctionEvaluations, CheckPoint::mParameters, saveToDouble(), split(), and toInt32().

Referenced by readValues().

◆ readItems()

std::vector< FittingItem * > ResultParser::readItems ( std::istream &  reader,
bool &  flag 
)
static

References containsOptimization(), FittingItem::mAffectedExperiments, parseItem(), skipTo(), split(), and trim().

Referenced by parseStream().

◆ readValues()

std::vector< CheckPoint * > ResultParser::readValues ( std::istream &  reader)
static

References FUNCTION_EVAL, parseValue(), and skipTo().

Referenced by parseStream().

◆ rtrim()

std::string & ResultParser::rtrim ( std::string &  s)
inlinestatic

Referenced by trim(), and trim_in_place().

◆ saveToDouble()

double ResultParser::saveToDouble ( const std::string &  doubleString,
double  defaultValue = 0 
)
static

References trim().

Referenced by CScanItemLinear::CScanItemLinear(), CSEDMLExporter::exportNthScanItem(), CTrajectoryProblem::getValues(), parseItem(), parseValue(), and CDataModel::reparameterizeFromIniFile().

◆ skipTo() [1/2]

bool ResultParser::skipTo ( std::istream &  reader,
const std::string &  lineStart 
)
static

Referenced by readItems(), and readValues().

◆ skipTo() [2/2]

bool ResultParser::skipTo ( std::istream &  reader,
const std::string &  lineStart,
bool &  flag,
bool(*)(const std::string &)  eval = NULL 
)
static

References trim().

◆ split() [1/3]

std::vector< std::string > ResultParser::split ( const std::string &  s,
char  delim,
bool  removeEmpty = true 
)
static

Referenced by CScanItemLinear::CScanItemLinear(), CSEDMLExporter::exportNthScanItem(), CTrajectoryProblem::getValues(), parseValue(), and readItems().

◆ split() [2/3]

std::vector< std::string > & ResultParser::split ( const std::string &  s,
char  delim,
std::vector< std::string > &  elems,
bool  removeEmpty = true 
)
static

References trim().

◆ split() [3/3]

std::vector< std::string > & ResultParser::split ( const std::string &  s,
const std::string &  delims,
std::vector< std::string > &  elems 
)
static

◆ toInt32()

int ResultParser::toInt32 ( const std::string &  str)
static

Referenced by parseValue().

◆ trim()

std::string ResultParser::trim ( const std::string &  s1)
static

References ltrim(), and rtrim().

Referenced by parseItem(), readItems(), CDataModel::reparameterizeFromIniFile(), saveToDouble(), skipTo(), and split().

◆ trim_in_place()

std::string & ResultParser::trim_in_place ( std::string &  s)
inlinestatic

References ltrim(), and rtrim().

The documentation for this class was generated from the following files: