#include "copasi/copasi.h"
#include "CTauLeapMethod.h"
#include "CTrajectoryProblem.h"
#include "copasi/math/CMathContainer.h"
#include "copasi/model/CModel.h"
#include "copasi/model/CMetab.h"
#include "copasi/model/CReaction.h"
#include "copasi/model/CState.h"
#include "copasi/model/CChemEq.h"
#include "copasi/model/CChemEqElement.h"
#include "copasi/model/CCompartment.h"
#include "copasi/core/CDataVector.h"
#include "copasi/core/CMatrix.h"
#include "copasi/utilities/CDependencyGraph.h"
#include "copasi/utilities/CIndexedPriorityQueue.h"
#include "copasi/randomGenerator/CRandom.h"

Macros
#define	EPS 0.03

#define	INT_EPSILON 0.1

#define	RANDOM_SEED 1

#define	TAU 0.01

#define	USE_RANDOM_SEED false

Macro Definition Documentation

◆ EPS

#define EPS 0.03

◆ INT_EPSILON

#define INT_EPSILON 0.1

◆ RANDOM_SEED

#define RANDOM_SEED 1

◆ TAU

#define TAU 0.01

CTauLeapMethod

This class implements the tau-Leap method for the simulation of a biochemical system over time (see Gillespie (2001): Approximate accelerated stochastic simulation of chemically reacting systems. J. Chemical Physics, 115:1716-1733).

File name: CTauLeapMethod.cpp Author: Juergen Pahle Email: juerg.nosp@m.en.p.nosp@m.ahle@.nosp@m.eml-.nosp@m.r.vil.nosp@m.la-b.nosp@m.osch..nosp@m.de

Last change: 20, April 2004

(C) European Media Lab 2004.

◆ USE_RANDOM_SEED