COPASI API
4.40.278
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This is the complete list of members for CCSPMethod, including all inherited members.
__SIZE enum value | CDataObject | |
add(CDataObject *pObject, const bool &adopt=true) | CDataContainer | virtual |
addGroup(const std::string &name) | CCopasiParameterGroup | |
addIssue(const CIssue &issue) | CDataObject | |
addMatrixReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
addObjectReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
addParameter(const CCopasiParameter ¶meter) | CCopasiParameterGroup | |
addParameter(const std::string &name, const CCopasiParameter::Type type, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | CCopasiParameterGroup | |
addParameter(const std::string &name, const CCopasiParameter::Type type, const CType &value, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | CCopasiParameterGroup | inline |
addParameter(CCopasiParameter *pParameter) | CCopasiParameterGroup | |
addReference(const CDataContainer *pReference) | CDataObject | |
addVectorReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
allocateValidValues(const Type &type, void *&pValidValues) | CCopasiParameter | static |
allocateValue(const Type &type, void *&pValue) | CCopasiParameter | static |
appendDeletedDependentData(CUndoData &undoData) const | CDataContainer | virtual |
applyData(const CData &data, CUndoData::CChangeSet &changes) | CCopasiParameterGroup | virtual |
Array enum value | CDataObject | |
assertGroup(const std::string &name, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | CCopasiParameterGroup | |
assertParameter(const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue, const CCopasiParameter::UserInterfaceFlag &flag=CCopasiParameter::UserInterfaceFlag::All) | CCopasiParameterGroup | inline |
assignDefault(const void *pDefault) | CCopasiParameter | private |
assignValidValues(const void *pValidValues) | CCopasiParameter | private |
assignValue(const Type &type, void *&pValue, const void *pNewValue) | CCopasiParameter | static |
assignValue(const void *pValue) | CCopasiParameter | private |
basisRefinement(C_INT N, C_INT M, const CMatrix< C_FLOAT64 > &ALA, const CMatrix< C_FLOAT64 > &TAU, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &A0, CMatrix< C_FLOAT64 > &B0) | CCSPMethod | protected |
beginIndex() const | CCopasiParameterGroup | |
beginName() const | CCopasiParameterGroup | |
calculateDerivatives(C_FLOAT64 *X1, C_FLOAT64 *Y1, bool useReducedModel) | CTSSAMethod | protected |
calculateJacobian(C_INT &n, CVector< C_FLOAT64 > &y, CMatrix< C_FLOAT64 > &J) | CCSPMethod | protected |
calculateValue() override | CDataObject | virtual |
CCopasiMethod() | CCopasiMethod | private |
CCopasiMethod(const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType) | CCopasiMethod | protected |
CCopasiMethod(const CCopasiMethod &src) | CCopasiMethod | protected |
CCopasiMethod(const CCopasiMethod &src, const CDataContainer *pParent) | CCopasiMethod | |
CCopasiParameter(const CCopasiParameter &src) | CCopasiParameter | protected |
CCopasiParameter() | CCopasiParameter | private |
CCopasiParameter(const CCopasiParameter &src, const CDataContainer *pParent) | CCopasiParameter | |
CCopasiParameter(const std::string &name, const Type &type, const void *pValue=NULL, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="Parameter") | CCopasiParameter | |
CCopasiParameterGroup() | CCopasiParameterGroup | protected |
CCopasiParameterGroup(const CCopasiParameterGroup &src, const CDataContainer *pParent=NULL) | CCopasiParameterGroup | |
CCopasiParameterGroup(const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &objectType="ParameterGroup") | CCopasiParameterGroup | |
CCSPMethod() | CCSPMethod | private |
CCSPMethod(const CDataContainer *pParent, const CTaskEnum::Method &methodType=CTaskEnum::Method::tssCSP, const CTaskEnum::Task &taskType=CTaskEnum::Task::tssAnalysis) | CCSPMethod | |
CCSPMethod(const CCSPMethod &src, const CDataContainer *pParent) | CCSPMethod | |
CDataContainer() | CDataContainer | private |
CDataContainer(const CDataContainer &src) | CDataContainer | protected |
CDataContainer(const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | |
CDataContainer(const CDataContainer &src, const CDataContainer *pParent) | CDataContainer | |
CDataObject() | CDataObject | protected |
CDataObject(const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataObject | protected |
CDataObject(const CDataObject &src, const CDataContainer *pParent=NULL) | CDataObject | |
clear() | CCopasiParameterGroup | |
clearCallBack() | CCopasiMethod | virtual |
CObjectInterface() | CObjectInterface | |
CObjectInterface(const CObjectInterface &src) | CObjectInterface | |
const_name_iterator typedef | CCopasiParameterGroup | |
Container enum value | CDataObject | |
ContainerList typedef | CObjectInterface | |
createAnnotationsM() | CCSPMethod | virtual |
createUndoData(CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const | CCopasiParameterGroup | virtual |
createValue() | CCopasiParameter | private |
CSPImportanceIndex(C_INT &N, C_FLOAT64 &tauM1, CMatrix< C_FLOAT64 > &Q) | CCSPMethod | protected |
CSPOutput(C_INT &N, C_INT &M, C_INT &R) | CCSPMethod | |
CSPParticipationIndex(C_INT &N, C_INT &M, C_FLOAT64 &tauM1, CMatrix< C_FLOAT64 > &B0) | CCSPMethod | protected |
CSPradicalPointer(C_INT &N, C_INT &M, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B) | CCSPMethod | protected |
cspstep(const double &deltaT, C_INT &n, C_INT &m, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B) | CCSPMethod | protected |
CTSSAMethod() | CTSSAMethod | private |
CTSSAMethod(const CDataContainer *pParent, const CTaskEnum::Method &methodType, const CTaskEnum::Task &taskType=CTaskEnum::Task::tssAnalysis) | CTSSAMethod | |
CTSSAMethod(const CTSSAMethod &src, const CDataContainer *pParent) | CTSSAMethod | |
CUndoObjectInterface() | CUndoObjectInterface | |
CUndoObjectInterface(const CUndoObjectInterface &src) | CUndoObjectInterface | |
DataModel enum value | CDataObject | |
DataObject(const CObjectInterface *pInterface) | CObjectInterface | static |
DataObjectSet typedef | CDataObject | |
deleteValidValues(const Type &type, void *&pValidValues) | CCopasiParameter | static |
deleteValue(const Type &type, void *&pValue) | CCopasiParameter | static |
destruct() override | CDataObject | virtual |
DisplayName enum value | CDataObject | |
elements typedef | CCopasiParameterGroup | |
elevateChildren() | CTSSAMethod | protectedvirtual |
EmptyList | CDataContainer | static |
emptyOutputData(C_INT N, C_INT M, C_INT R) | CCSPMethod | protected |
emptyVectors() | CCSPMethod | |
endIndex() const | CCopasiParameterGroup | |
endName() const | CCopasiParameterGroup | |
eUserInterfaceFlag enum name | CCopasiParameter | |
findCandidatesNumber(C_INT &n, C_INT &k, CVector< C_FLOAT64 > &tsc, C_INT &info) | CCSPMethod | protected |
findTimeScaleSeparation(C_INT &n, C_INT &k, CVector< C_FLOAT64 > &tsc, C_INT &info) | CCSPMethod | protected |
Flag enum name | CDataObject | |
fromData(const CData &data, CUndoObjectInterface *pParent) | CCopasiParameter | static |
generateUuid() | CUndoObjectInterface | |
getCallBack() const | CCopasiMethod | |
getChildObjectUnits(const CDataObject *pObject) const | CDataContainer | virtual |
getCN() const override | CCopasiParameter | virtual |
getCurrentStep() const | CTSSAMethod | |
getDataObject() const override | CDataObject | virtual |
getDefault() const | CCopasiParameter | inline |
getDescendants(CDataObject::DataObjectSet &descendants, const bool &recursive=false) const | CDataContainer | |
getElementTemplates() | CCopasiParameterGroup | |
getElementTemplates() const | CCopasiParameterGroup | |
getFastParticipationIndexAnn() const | CCSPMethod | |
getFastReactionPointerAnn() const | CCSPMethod | |
getFastReactionPointerNormedAnn() const | CCSPMethod | |
getGroup(const std::string &name) | CCopasiParameterGroup | |
getGroup(const std::string &name) const | CCopasiParameterGroup | |
getGroup(const size_t &index) | CCopasiParameterGroup | |
getGroup(const size_t &index) const | CCopasiParameterGroup | |
getImportanceIndexAnn() const | CCSPMethod | |
getImportanceIndexNormedRowAnn() const | CCSPMethod | |
getIndex(const CDataObject *pObject) const | CCopasiParameterGroup | virtual |
getIndex(const std::string &name) const | CCopasiParameterGroup | |
getKey(const std::string &name) const | CCopasiParameterGroup | |
getKey(const size_t &index) const | CCopasiParameterGroup | |
CCopasiParameter::getKey() const override | CCopasiParameter | virtual |
getMathContainer() const | CCopasiMethod | |
getName(const size_t &index) const | CCopasiParameterGroup | virtual |
getObject(const CCommonName &cn) const | CCopasiParameterGroup | virtual |
getObjectAncestor(const std::string &type) const | CDataObject | |
getObjectDataModel() const | CDataObject | |
getObjectDisplayName() const override | CCopasiParameter | virtual |
GetObjectFromCN(const ContainerList &listOfContainer, const CCommonName &objName) | CObjectInterface | static |
getObjectFromCN(const CCommonName &cn) const | CDataObject | |
getObjectName() const | CDataObject | |
getObjectParent() const | CDataObject | |
getObjects() const | CDataContainer | virtual |
getObjects() | CDataContainer | virtual |
getObjectType() const | CDataObject | |
getParameter(std::string name) | CCopasiParameterGroup | |
getParameter(std::string name) const | CCopasiParameterGroup | |
getParameter(const size_t &index) | CCopasiParameterGroup | |
getParameter(const size_t &index) const | CCopasiParameterGroup | |
getParticipationIndexAnn() const | CCSPMethod | |
getParticipationIndexNormedColumnAnn() const | CCSPMethod | |
getParticipationIndexNormedRowAnn() const | CCSPMethod | |
getPrerequisites() const override | CDataObject | virtual |
getRadicalPointerAnn() const | CCSPMethod | |
getSlowParticipationIndexAnn() const | CCSPMethod | |
getSubType() const | CCopasiMethod | |
getTable(const std::string &name) | CTSSAMethod | |
getTableNames() const | CTSSAMethod | |
getTimeForStep(int step) const | CTSSAMethod | |
getType() const | CCopasiMethod | |
CCopasiParameterGroup::getType(const std::string &name) const | CCopasiParameterGroup | |
CCopasiParameterGroup::getType(const size_t &index) const | CCopasiParameterGroup | |
getUniqueParameterName(const CCopasiParameter *pParameter) const | CCopasiParameterGroup | |
getUnits() const override | CDataContainer | virtual |
getUserInterfaceFlag() const | CCopasiParameter | |
getUuid() const | CUndoObjectInterface | |
getValidity() const override | CDataObject | virtual |
getValidValues() const | CCopasiParameter | inline |
getValidValues() | CCopasiParameter | inline |
getValidValuesPointer() const | CCopasiParameter | |
getValue(const std::string &name) const | CCopasiParameterGroup | inline |
getValue(const std::string &name) | CCopasiParameterGroup | inline |
getValue(const size_t &index) const | CCopasiParameterGroup | inline |
getValue(const size_t &index) | CCopasiParameterGroup | inline |
CCopasiParameter::getValue() const | CCopasiParameter | inline |
CCopasiParameter::getValue() | CCopasiParameter | inline |
getValueObject() const override | CDataContainer | virtual |
getValuePointer() const override | CCopasiParameter | virtual |
getValueReference() const | CCopasiParameter | |
getVec_TimeScale(int step) | CTSSAMethod | |
Gui enum value | CDataObject | |
hasFlag(const Flag &flag) const | CDataObject | |
hasValidValues() const | CCopasiParameter | |
haveTemplate() const | CCopasiParameterGroup | |
index_iterator typedef | CCopasiParameterGroup | |
initializeOutput() | CCSPMethod | virtual |
initializeParameter() | CCSPMethod | virtual |
initObjects() | CDataContainer | protected |
insert(const CData &data) | CCopasiParameterGroup | virtual |
integrationMethodStart() | CTSSAMethod | protected |
integrationStep(const double &deltaT) | CTSSAMethod | protected |
inValidValues(const CType &value) const | CCopasiParameter | inlineprivate |
isBasic() const | CCopasiParameter | |
isBlockDiagonal(C_INT N, C_INT M, const CMatrix< C_FLOAT64 > &ALA, const C_FLOAT64 &SMALL) | CCSPMethod | protected |
isDefault() const | CCopasiParameter | |
isEditable() const | CCopasiParameter | |
isPrerequisiteForContext(const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override | CDataObject | virtual |
isUnsupported() const | CCopasiParameter | |
isValidProblem(const CCopasiProblem *pProblem) | CTSSAMethod | virtual |
isValidValue(const C_FLOAT64 &value) const | CCopasiParameter | |
isValidValue(const C_INT32 &value) const | CCopasiParameter | |
isValidValue(const unsigned C_INT32 &value) const | CCopasiParameter | |
isValidValue(const bool &value) const | CCopasiParameter | |
isValidValue(const std::string &value) const | CCopasiParameter | |
isValidValue(const CCommonName &value) const | CCopasiParameter | |
isValidValue(const std::vector< CCopasiParameter * > &value) const | CCopasiParameter | |
isValidValue(const CType &) const | CCopasiParameter | inline |
load(CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH) | CCopasiMethod | virtual |
mAerror | CCSPMethod | protected |
mAggregateValidity | CDataObject | private |
mAmplitude | CCSPMethod | protected |
map_index(C_FLOAT64 *eval_r, C_INT *index, const C_INT &dim) | CTSSAMethod | protected |
map_index_desc(C_FLOAT64 *eval_r, C_INT *index, const C_INT &dim) | CTSSAMethod | protected |
mapTableToName | CTSSAMethod | protected |
mat_anal_fast_space(C_INT &slow) | CTSSAMethod | protected |
mat_anal_fast_space_thomas(C_INT &slow) | CTSSAMethod | protected |
mat_anal_metab(C_INT &slow) | CTSSAMethod | protected |
mat_anal_mod(C_INT &slow) | CTSSAMethod | protected |
mat_anal_mod_space(C_INT &slow) | CTSSAMethod | protected |
Matrix enum value | CDataObject | |
mB | CCSPMethod | protected |
mCfast | CTSSAMethod | protected |
mConcentration2Number | CTSSAMethod | protected |
mContainerState | CTSSAMethod | protected |
mCSPbasis | CCSPMethod | protected |
mCurrentStep | CTSSAMethod | protected |
mCurrentTime | CTSSAMethod | protected |
mDim | CTSSAMethod | protected |
mDtol | CTSSAMethod | protected |
mEPS | CTSSAMethod | protected |
mEps | CCSPMethod | protected |
mFastParticipationIndex | CCSPMethod | protected |
mFastParticipationIndexTab | CCSPMethod | protected |
mFastReactionPointer | CCSPMethod | protected |
mFastReactionPointerNormed | CCSPMethod | protected |
mFastReactionPointerNormedTab | CCSPMethod | protected |
mFastReactionPointerTab | CCSPMethod | protected |
mG | CCSPMethod | protected |
mI | CCSPMethod | protected |
mImportanceIndex | CCSPMethod | protected |
mImportanceIndexNormedRow | CCSPMethod | protected |
mImportanceIndexNormedRowTab | CCSPMethod | protected |
mImportanceIndexTab | CCSPMethod | protected |
mIter | CCSPMethod | protected |
mJacobian | CTSSAMethod | protected |
mJacobian_initial | CTSSAMethod | protected |
mKey | CCopasiParameter | protected |
mNumber2Concentration | CTSSAMethod | protected |
mObjectDisplayName | CDataObject | mutableprivate |
mObjectFlag | CDataObject | private |
mObjectName | CDataObject | private |
mObjects | CDataContainer | protected |
mObjectType | CDataObject | private |
ModelEntity enum value | CDataObject | |
modesAmplitude(C_INT N, const CVector< C_FLOAT64 > &g, const CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &F) | CCSPMethod | protected |
modesAreExhausted(C_INT N, C_INT M, C_FLOAT64 &tauM, C_FLOAT64 &tauM1, CVector< C_FLOAT64 > &g, const CMatrix< C_FLOAT64 > &A, const CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &F) | CCSPMethod | protected |
mParticipationIndex | CCSPMethod | protected |
mParticipationIndexNormedColumn | CCSPMethod | protected |
mParticipationIndexNormedColumnTab | CCSPMethod | protected |
mParticipationIndexNormedRow | CCSPMethod | protected |
mParticipationIndexNormedRowTab | CCSPMethod | protected |
mParticipationIndexTab | CCSPMethod | protected |
mpContainer | CCopasiMethod | protected |
mpContainerStateTime | CTSSAMethod | protected |
mpDefault | CCopasiParameter | protected |
mpElementTemplates | CCopasiParameterGroup | private |
mpFirstSpecies | CTSSAMethod | protected |
mpFirstSpeciesRate | CTSSAMethod | protected |
mpLsodaMethod | CTSSAMethod | protected |
mpObjectDisplayName | CDataObject | mutableprivate |
mpObjectName | CDataObject | mutableprivate |
mpObjectParent | CDataObject | private |
mpProblem | CTSSAMethod | protected |
mPrerequisits | CDataObject | protected |
mProcessReport | CCopasiMethod | protected |
mpUuid | CUndoObjectInterface | private |
mpValidValues | CCopasiParameter | protected |
mpValue | CCopasiParameter | protected |
mpValueReference | CCopasiParameter | mutableprotected |
mQ | CTSSAMethod | protected |
mQ_desc | CTSSAMethod | protected |
mQz | CTSSAMethod | protected |
mR | CTSSAMethod | protected |
mR_desc | CTSSAMethod | protected |
mRadicalPointer | CCSPMethod | protected |
mRadicalPointerTab | CCSPMethod | protected |
mReducedModel | CCSPMethod | protected |
mReferencedValidities | CDataObject | private |
mReferences | CDataObject | protected |
mRerror | CCSPMethod | protected |
mSetVectors | CCSPMethod | protected |
mSlow | CTSSAMethod | protected |
mSlowParticipationIndex | CCSPMethod | protected |
mSlowParticipationIndexTab | CCSPMethod | protected |
mSubType | CCopasiMethod | private |
mTaskType | CCopasiMethod | private |
mTd | CTSSAMethod | protected |
mTd_save | CTSSAMethod | protected |
mTdInverse | CTSSAMethod | protected |
mTdInverse_save | CTSSAMethod | protected |
mTsc | CCSPMethod | protected |
mTStep | CCSPMethod | protected |
mType | CCopasiParameter | private |
mUserInterfaceFlag | CCopasiParameter | protected |
mUuidLocked | CUndoObjectInterface | private |
mValidity | CObjectInterface | mutableprotected |
mVec_mFastParticipationIndex | CCSPMethod | protected |
mVec_mFastReactionPointer | CCSPMethod | protected |
mVec_mFastReactionPointerNormed | CCSPMethod | protected |
mVec_mImportanceIndex | CCSPMethod | protected |
mVec_mImportanceIndexNormedRow | CCSPMethod | protected |
mVec_mParticipationIndex | CCSPMethod | protected |
mVec_mParticipationIndexNormedColumn | CCSPMethod | protected |
mVec_mParticipationIndexNormedRow | CCSPMethod | protected |
mVec_mRadicalPointer | CCSPMethod | protected |
mVec_mSlowParticipationIndex | CCSPMethod | protected |
mVec_SlowModes | CTSSAMethod | protected |
mVec_TimeScale | CTSSAMethod | protected |
mVfast_space | CTSSAMethod | protected |
mVslow | CTSSAMethod | protected |
mVslow_metab | CTSSAMethod | protected |
mVslow_space | CTSSAMethod | protected |
mY | CCSPMethod | protected |
mY_cons | CTSSAMethod | protected |
mY_initial | CTSSAMethod | protected |
mYerror | CCSPMethod | protected |
name_iterator typedef | CCopasiParameterGroup | |
NameVector enum value | CDataObject | |
NonUniqueName enum value | CDataObject | |
objectMap typedef | CDataContainer | |
objectRenamed(CDataObject *pObject, const std::string &oldName) | CDataContainer | |
ObjectSet typedef | CObjectInterface | |
operator=(const CCopasiMethod &rhs) | CCopasiMethod | |
CCopasiParameterGroup::operator=(const CCopasiParameterGroup &rhs) | CCopasiParameterGroup | |
CCopasiParameter::operator=(const CCopasiParameter &rhs) | CCopasiParameter | |
orthog(C_INT &number1, C_INT &number2) | CTSSAMethod | protected |
pFastParticipationIndexAnn | CCSPMethod | protected |
pFastReactionPointerAnn | CCSPMethod | protected |
pFastReactionPointerNormedAnn | CCSPMethod | protected |
pImportanceIndexAnn | CCSPMethod | protected |
pImportanceIndexNormedRowAnn | CCSPMethod | protected |
pParticipationIndexAnn | CCSPMethod | protected |
pParticipationIndexNormedColumnAnn | CCSPMethod | protected |
pParticipationIndexNormedRowAnn | CCSPMethod | protected |
pRadicalPointerAnn | CCSPMethod | protected |
prerequisitsContains(const DataObjectSet &objects) const | CDataObject | |
print(std::ostream *ostream) const | CCopasiMethod | virtual |
printResult(std::ostream *ostream) const | CCSPMethod | virtual |
pSlowParticipationIndexAnn | CCSPMethod | protected |
Reference enum value | CDataObject | |
refreshAggregateValidity() | CDataObject | private |
remove(CDataObject *pObject) | CCopasiParameterGroup | virtual |
removeIssue(const CIssue &issue) | CDataObject | |
removeParameter(const std::string &name) | CCopasiParameterGroup | |
removeParameter(const size_t &index) | CCopasiParameterGroup | |
removeParameter(CCopasiParameter *pParameter) | CCopasiParameterGroup | |
removeReference(const CDataContainer *pReference) | CDataObject | |
Root enum value | CDataObject | |
sanitizeObjectName(std::string &name) | CDataObject | static |
schur(C_INT &info) | CTSSAMethod | protected |
schur_desc(C_INT &info) | CTSSAMethod | protected |
Separator enum value | CDataObject | |
setAnnotationM(size_t step) | CCSPMethod | virtual |
setCallBack(CProcessReportLevel callBack) | CCopasiMethod | virtual |
setDefault(const CType &defaultValue) | CCopasiParameter | inline |
setDefault(const std::vector< CCopasiParameter * > &defaultValue) | CCopasiParameter | |
setMathContainer(CMathContainer *pContainer) | CCopasiMethod | |
setObjectName(const std::string &name) | CDataObject | |
setObjectParent(const CDataContainer *pParent) override | CCopasiParameter | virtual |
setProblem(CTSSAProblem *problem) | CTSSAMethod | |
setUserInterfaceFlag(const UserInterfaceFlag &flag) | CCopasiParameterGroup | virtual |
setUuid(const xg::Guid &uuid) | CUndoObjectInterface | |
setUuid(const std::string &uuid) | CUndoObjectInterface | |
setValidValues(const std::vector< std::pair< CType, CType > > &validValues) | CCopasiParameter | inline |
setValidValues(const CEnumAnnotation< CType, Enum > &validValues) | CCopasiParameter | inline |
setValue(const std::string &name, const CType &value) | CCopasiParameterGroup | inline |
setValue(const size_t &index, const CType &value) | CCopasiParameterGroup | inline |
CCopasiParameter::setValue(const CType &value) | CCopasiParameter | inline |
CCopasiParameter::setValue(const std::vector< CCopasiParameter * > &value) | CCopasiParameter | |
setVectors(int fast) | CCSPMethod | |
setVectorsToNaN() | CCSPMethod | |
signalMathContainerChanged() | CCopasiMethod | protectedvirtual |
size(const UserInterfaceFlag &require=UserInterfaceFlag::None, const UserInterfaceFlag &exclude=UserInterfaceFlag::None) const | CCopasiParameterGroup | |
smadd(const CMatrix< C_FLOAT64 > &A, const CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT n1, C_INT n2) | CCSPMethod | protected |
sminverse(C_INT n, const CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B) | CCSPMethod | protected |
smmult(const CMatrix< C_FLOAT64 > &A, const CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT n1, C_INT n2, C_INT n3) | CCSPMethod | protected |
smnorm(C_INT n, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, C_INT n1) | CCSPMethod | protected |
smsubst(const CMatrix< C_FLOAT64 > &A, const CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT n1, C_INT n2) | CCSPMethod | protected |
start() | CCSPMethod | virtual |
StaticString enum value | CDataObject | |
step(const double &deltaT) | CCSPMethod | virtual |
swap(const size_t &iFrom, const size_t &iTo) | CCopasiParameterGroup | |
swap(index_iterator &from, index_iterator &to) | CCopasiParameterGroup | |
sylvester(C_INT slow, C_INT &info) | CTSSAMethod | protected |
tableNames | CTSSAMethod | protected |
toData() const | CCopasiParameterGroup | virtual |
Type enum name | CCopasiParameter | |
TypeName | CCopasiParameter | static |
update_nid(C_INT *index, C_INT *nid, const C_INT &dim) | CTSSAMethod | protected |
update_pid(C_INT *index, C_INT *pid, const C_INT &dim) | CTSSAMethod | protected |
updateCurrentTime() | CTSSAMethod | protectedvirtual |
updateIndex(const size_t &index, const CUndoObjectInterface *pUndoObject) | CCopasiParameterGroup | virtual |
UserInterfaceFlag typedef | CCopasiParameter | |
validityChanged(const CValidity &changedValidity) override | CDataObject | virtual |
validityRemoved(const CValidity &changedValidity) | CDataObject | |
ValueBool enum value | CDataObject | |
ValueDbl enum value | CDataObject | |
ValueInt enum value | CDataObject | |
ValueInt64 enum value | CDataObject | |
ValueString enum value | CDataObject | |
Vector enum value | CDataObject | |
XMLType | CCopasiParameter | static |
yCorrection(C_INT &N, C_INT &M, CVector< C_FLOAT64 > &y, CMatrix< C_FLOAT64 > &TAUM, CMatrix< C_FLOAT64 > &F, CMatrix< C_FLOAT64 > &A) | CCSPMethod | protected |
~CCopasiMethod() | CCopasiMethod | virtual |
~CCopasiParameter() | CCopasiParameter | virtual |
~CCopasiParameterGroup() | CCopasiParameterGroup | virtual |
~CCSPMethod() | CCSPMethod | virtual |
~CDataContainer() | CDataContainer | virtual |
~CDataObject() | CDataObject | virtual |
~CObjectInterface() | CObjectInterface | virtual |
~CTSSAMethod() | CTSSAMethod | virtual |
~CUndoObjectInterface() | CUndoObjectInterface | virtual |