COPASI API  4.40.278
Classes | Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
CChemEqParserBase Class Referenceabstract

#include <CChemEqParser.h>

Inheritance diagram for CChemEqParserBase:
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Classes

struct  Data
 

Public Member Functions

 CChemEqParserBase ()
 
const std::vector< std::string > & getModifierCompartments () const
 
const std::vector< C_FLOAT64 > & getModifierMulitplicities () const
 
const std::vector< std::string > & getModifierNames () const
 
const std::vector< std::string > & getProductCompartments () const
 
const std::vector< C_FLOAT64 > & getProductMulitplicities () const
 
const std::vector< std::string > & getProductNames () const
 
const std::vector< std::string > & getSubstrateCompartments () const
 
const std::vector< C_FLOAT64 > & getSubstrateMulitplicities () const
 
const std::vector< std::string > & getSubstrateNames () const
 
const bool & isReversible () const
 
virtual int yylex ()=0
 
virtual int yyparse ()
 
virtual ~ CChemEqParserBase ()
 

Protected Member Functions

void correctErrorPosition ()
 

Protected Attributes

std::vector< std::string > mModifierCompartments
 
std::vector< C_FLOAT64 > mModifierMult
 
std::vector< std::string > mModifierNames
 
Data * mpData
 
unsigned C_INT32 mPosition
 
std::vector< std::string > mProductCompartments
 
std::vector< C_FLOAT64 > mProductMult
 
std::vector< std::string > mProductNames
 
bool mReversibility
 
std::vector< std::string > mSubstrateCompartments
 
std::vector< C_FLOAT64 > mSubstrateMult
 
std::vector< std::string > mSubstrateNames
 

Detailed Description

This is a base class for the CChemEqParser adding member attributes to enhance the internal functionality.

Constructor & Destructor Documentation

◆ CChemEqParserBase()

CChemEqParserBase::CChemEqParserBase ( )

Default constructor

◆ ~ CChemEqParserBase()

virtual CChemEqParserBase::~ CChemEqParserBase ( )
virtual

Destructor

Member Function Documentation

◆ correctErrorPosition()

void CChemEqParserBase::correctErrorPosition ( )
protected

◆ getModifierCompartments()

const std::vector< std::string > & CChemEqParserBase::getModifierCompartments ( ) const

References mModifierCompartments.

Referenced by CChemEqInterface::setChemEqString().

◆ getModifierMulitplicities()

const std::vector< C_FLOAT64 > & CChemEqParserBase::getModifierMulitplicities ( ) const

References mModifierMult.

Referenced by CChemEqInterface::setChemEqString().

◆ getModifierNames()

const std::vector< std::string > & CChemEqParserBase::getModifierNames ( ) const

References mModifierNames.

Referenced by CChemEqInterface::setChemEqString().

◆ getProductCompartments()

const std::vector< std::string > & CChemEqParserBase::getProductCompartments ( ) const

References mProductCompartments.

Referenced by CChemEqInterface::setChemEqString().

◆ getProductMulitplicities()

const std::vector< C_FLOAT64 > & CChemEqParserBase::getProductMulitplicities ( ) const

References mProductMult.

Referenced by CChemEqInterface::setChemEqString().

◆ getProductNames()

const std::vector< std::string > & CChemEqParserBase::getProductNames ( ) const

References mProductNames.

Referenced by CChemEqInterface::setChemEqString().

◆ getSubstrateCompartments()

const std::vector< std::string > & CChemEqParserBase::getSubstrateCompartments ( ) const

References mSubstrateCompartments.

Referenced by CChemEqInterface::setChemEqString(), CMetabNameInterface::splitDisplayName(), and CMetabNameInterface::unQuote().

◆ getSubstrateMulitplicities()

const std::vector< C_FLOAT64 > & CChemEqParserBase::getSubstrateMulitplicities ( ) const

References mSubstrateMult.

Referenced by CChemEqInterface::setChemEqString().

◆ getSubstrateNames()

const std::vector< std::string > & CChemEqParserBase::getSubstrateNames ( ) const

References mSubstrateNames.

Referenced by CChemEqInterface::setChemEqString(), CMetabNameInterface::splitDisplayName(), and CMetabNameInterface::unQuote().

◆ isReversible()

const bool & CChemEqParserBase::isReversible ( ) const

References mReversibility.

Referenced by CChemEqInterface::setChemEqString().

◆ yylex()

virtual int CChemEqParserBase::yylex ( )
pure virtual

Implemented in CChemEqParser.

◆ yyparse()

int CChemEqParserBase::yyparse ( void  )
virtual

References YY_, YY_ASSERT, YY_CAST, YY_IGNORE_USELESS_CAST_BEGIN, YY_IGNORE_USELESS_CAST_END, YYABORT, YYACCEPT, yychar, YYDPRINTF, YYEMPTY, YYFINAL, YYINITDEPTH, YYMAXDEPTH, yynerrs, YYNSTATES, YYPTRDIFF_T, YYSIZE_T, YYSIZEOF, yyalloc::yyss_alloc, YYSTACK_ALLOC, YYSTACK_BYTES, YYSTACK_FREE, YYSTACK_RELOCATE, YYSTYPE, and yyalloc::yyvs_alloc.

Referenced by CChemEqInterface::isValidEq(), CChemEqInterface::setChemEqString(), CMetabNameInterface::splitDisplayName(), and CMetabNameInterface::unQuote().

Member Data Documentation

◆ mModifierCompartments

std::vector< std::string > CChemEqParserBase::mModifierCompartments
protected

Referenced by getModifierCompartments().

◆ mModifierMult

std::vector< C_FLOAT64 > CChemEqParserBase::mModifierMult
protected

Referenced by getModifierMulitplicities().

◆ mModifierNames

std::vector< std::string > CChemEqParserBase::mModifierNames
protected

Referenced by getModifierNames().

◆ mpData

Data* CChemEqParserBase::mpData
protected

◆ mPosition

unsigned C_INT32 CChemEqParserBase::mPosition
protected

◆ mProductCompartments

std::vector< std::string > CChemEqParserBase::mProductCompartments
protected

Referenced by getProductCompartments().

◆ mProductMult

std::vector< C_FLOAT64 > CChemEqParserBase::mProductMult
protected

Referenced by getProductMulitplicities().

◆ mProductNames

std::vector< std::string > CChemEqParserBase::mProductNames
protected

Referenced by getProductNames().

◆ mReversibility

bool CChemEqParserBase::mReversibility
protected

Referenced by isReversible().

◆ mSubstrateCompartments

std::vector< std::string > CChemEqParserBase::mSubstrateCompartments
protected

Referenced by getSubstrateCompartments().

◆ mSubstrateMult

std::vector< C_FLOAT64 > CChemEqParserBase::mSubstrateMult
protected

Referenced by getSubstrateMulitplicities().

◆ mSubstrateNames

std::vector< std::string > CChemEqParserBase::mSubstrateNames
protected

Referenced by getSubstrateNames().

The documentation for this class was generated from the following files: