CModelMerging Class Reference

#include <CModelMerging.h>

Public Types
enum	Type { ignore = 0 , merge }

Public Member Functions
	CModelMerging (CModel *pModel)
void	setModel (CModel *pModel)
void	simpleCall (std::vector< std::string > &toKey, std::vector< std::string > &objectKey)
	just a simple method to call during development More...

Static Public Attributes
static const std::string	TypeName []

Protected Member Functions
bool	mergeInExpression (std::string toKey, std::string key, CExpression *pExpression)
bool	mergeMetabolites (std::string toKey, std::string key)

Protected Attributes
CModel *	mpModel

Member Enumeration Documentation

Type

enum CModelMerging::Type

Enumeration of the types of columns known to COPASI.

Enumerator
ignore
merge

Constructor & Destructor Documentation

CModelMerging()

CModelMerging::CModelMerging

(

CModel *

pModel

)

Member Function Documentation

mergeInExpression()

bool CModelMerging::mergeInExpression ( std::string  toKey, std::string  key, CExpression *  pExpression  )

protected

References CKeyFactory::get(), CDataObject::getCN(), CDataObject::getKey(), CRootContainer::getKeyFactory(), CEvaluationTree::getNodeList(), CDataContainer::getObject(), CEvaluationNodeObject::getObjectCN(), CDataObject::getObjectDataModel(), CDataObject::getObjectName(), CDataObject::getObjectParent(), CDataObject::hasFlag(), mpModel, CEvaluationNode::OBJECT, CDataObject::Reference, CEvaluationNodeObject::setData(), and CEvaluationTree::updateTree().

Referenced by mergeMetabolites().

mergeMetabolites()

bool CModelMerging::mergeMetabolites ( std::string  toKey, std::string  key  )

protected

References CModelEntity::ASSIGNMENT, CModelEntity::FIXED, CReaction::getChemEq(), CModel::getCompartments(), CModel::getEvents(), CEventAssignment::getExpressionPtr(), CModelEntity::getExpressionPtr(), CReaction::getFunctionParameters(), CModelEntity::getInitialExpression(), CModelEntity::getInitialExpressionPtr(), CModelEntity::getKey(), CChemEqElement::getMetabolite(), CModel::getMetabolites(), CModel::getModelValues(), CChemEq::getModifiers(), CChemEq::getProducts(), CModel::getReactions(), CModelEntity::getStatus(), CChemEq::getSubstrates(), mergeInExpression(), CFunctionParameter::MODIFIER, mpModel, CModelEntity::ODE, CFunctionParameter::PARAMETER, CFunctionParameter::PRODUCT, CModelEntity::REACTIONS, CChemEqElement::setMetabolite(), CDataVector< CType >::size(), CEvaluationTree::size(), CFunctionParameters::size(), CFunctionParameter::SUBSTRATE, CFunctionParameter::TIME, and CFunctionParameter::VOLUME.

Referenced by simpleCall().

setModel()

void CModelMerging::setModel

(

CModel *

pModel

)

References mpModel.

simpleCall()

void CModelMerging::simpleCall	(	std::vector< std::string > &	toKey,
		std::vector< std::string > &	objectKey
	)

just a simple method to call during development

References CModel::compileIfNecessary(), CCopasiMessage::ERROR, fatalError, CModelEntity::getKey(), CModel::getMetabolites(), CDataObject::getObjectName(), MCModelMerging, mergeMetabolites(), mpModel, CModel::removeMetabolite(), and CDataVector< CType >::size().

Member Data Documentation

mpModel

CModel* CModelMerging::mpModel

protected

Referenced by mergeInExpression(), mergeMetabolites(), setModel(), and simpleCall().

TypeName

const std::string CModelMerging::TypeName

static

Initial value:

=
{
  "ignore",
  "merge",
  ""
}

String literals for the GUI to display type names of columns known to COPASI.

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The documentation for this class was generated from the following files:

• CModelMerging.h
• CModelMerging.cpp