CModelExpansion::SetOfModelElements Class Reference

#include <CModelExpansion.h>

Public Member Functions
void	addCompartment (const CCompartment *x)
void	addEvent (const CEvent *x)
void	addGlobalQuantity (const CModelValue *x)
void	addMetab (const CMetab *x)
bool	addObject (const CDataObject *x)
void	addReaction (const CReaction *x)
bool	contains (const CDataObject *x) const
bool	contains (const std::string &key) const
void	fillComplete (const CModel *pModel)
void	fillDependencies (const CModel *pModel)
void	setModel (const CModel *x)

Public Attributes
std::set< const CCompartment * >	mCompartments
std::set< const CEvent * >	mEvents
std::set< const CModelValue * >	mGlobalQuantities
std::set< const CMetab * >	mMetabs
const CModel *	mpModel {NULL}
std::set< const CReaction * >	mReactions

Detailed Description

This class describes a set of model elements that are supposed to be duplicated. The second element in each of the pairs is used temporarily to hold the copy.

Member Function Documentation

addCompartment()

void CModelExpansion::SetOfModelElements::addCompartment

(

const CCompartment *

x

)

References mCompartments.

Referenced by CModelExpansion::simpleCall().

addEvent()

void CModelExpansion::SetOfModelElements::addEvent

(

const CEvent *

x

)

addGlobalQuantity()

void CModelExpansion::SetOfModelElements::addGlobalQuantity

(

const CModelValue *

x

)

addMetab()

void CModelExpansion::SetOfModelElements::addMetab

(

const CMetab *

x

)

addObject()

bool CModelExpansion::SetOfModelElements::addObject

(

const CDataObject *

x

)

References CModelExpansion::setModel().

Referenced by CModelExpansion::existDependentEntities().

addReaction()

void CModelExpansion::SetOfModelElements::addReaction

(

const CReaction *

x

)

contains() [1/2]

bool CModelExpansion::SetOfModelElements::contains

(

const CDataObject *

x

)

const

Checks whether an object is present in this set

References CModelExpansion::mpModel.

Referenced by CModelExpansion::duplicateEvent(), CModelExpansion::duplicateMetab(), CModelExpansion::duplicateReaction(), CModelExpansion::expressionContainsObject(), and CModelExpansion::updateExpression().

contains() [2/2]

bool CModelExpansion::SetOfModelElements::contains

(

const std::string &

key

)

const

References CKeyFactory::get(), and CRootContainer::getKeyFactory().

fillComplete()

void CModelExpansion::SetOfModelElements::fillComplete

(

const CModel *

pModel

)

enters all the objects from pModel

References CModel::getCompartments(), CModel::getEvents(), CModel::getMetabolites(), CModel::getModelValues(), CModel::getReactions(), and CModelExpansion::setModel().

Referenced by CModelExpansion::copyCompleteModel().

fillDependencies()

void CModelExpansion::SetOfModelElements::fillDependencies

(

const CModel *

pModel

)

Determines which other object have to be duplicated based on those already present.

References CModel::appendAllDependents(), CDataContainer::getDescendants(), and CModelExpansion::mpModel.

Referenced by CModelExpansion::existDependentEntities(), and CModelExpansion::simpleCall().

setModel()

void CModelExpansion::SetOfModelElements::setModel

(

const CModel *

x

)

References CModelExpansion::mpModel.

Member Data Documentation

mCompartments

std::set<const CCompartment*> CModelExpansion::SetOfModelElements::mCompartments

Referenced by addCompartment(), CModelExpansion::duplicate(), and CModelExpansion::existDependentEntities().

mEvents

std::set<const CEvent*> CModelExpansion::SetOfModelElements::mEvents

Referenced by CModelExpansion::duplicate(), and CModelExpansion::existDependentEntities().

mGlobalQuantities

std::set<const CModelValue*> CModelExpansion::SetOfModelElements::mGlobalQuantities

Referenced by CModelExpansion::duplicate(), and CModelExpansion::existDependentEntities().

mMetabs

std::set<const CMetab*> CModelExpansion::SetOfModelElements::mMetabs

Referenced by CModelExpansion::duplicate(), and CModelExpansion::existDependentEntities().

mpModel

const CModel* CModelExpansion::SetOfModelElements::mpModel {NULL}

mReactions

std::set<const CReaction*> CModelExpansion::SetOfModelElements::mReactions

Referenced by CModelExpansion::duplicate(), and CModelExpansion::existDependentEntities().

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The documentation for this class was generated from the following files:

• CModelExpansion.h
• CModelExpansion.cpp