COPASI API  4.16.103
CFitProblem Member List

This is the complete list of members for CFitProblem, including all inherited members.

add(CCopasiObject *pObject, const bool &adopt=true)CCopasiContainervirtual
addDirectDependency(const CCopasiObject *pObject)CCopasiObject
addGroup(const std::string &name)CCopasiParameterGroup
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
addOptItem(const CCopasiObjectName &objectCN)COptProblem
addParameter(const CCopasiParameter &parameter)CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type)CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type, const CType &value)CCopasiParameterGroupinline
addParameter(CCopasiParameter *pParameter)CCopasiParameterGroup
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
Array enum valueCCopasiObjectprotected
assertGroup(const std::string &name)CCopasiParameterGroup
assertParameter(const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue)CCopasiParameterGroupinline
beginIndex() const CCopasiParameterGroup
beginName() const CCopasiParameterGroup
BOOL enum valueCCopasiParameter
buildUpdateSequence(const DataObjectSet &objects, const DataObjectSet &uptoDateObjects, const DataObjectSet &context=DataObjectSet())CCopasiObjectstatic
calculate()CFitProblemvirtual
calculateCrossValidation()CFitProblemprivate
calculateStatistics(const C_FLOAT64 &factor=1.0e-003, const C_FLOAT64 &resolution=1.0e-009)CFitProblemvirtual
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)CCopasiContainer
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)CCopasiContainer
CCopasiObject()CCopasiObjectprotected
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)CCopasiObjectprotected
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL)CCopasiObject
CCopasiParameter(const CCopasiParameter &src, const CCopasiContainer *pParent=NULL)CCopasiParameter
CCopasiParameter(const std::string &name, const Type &type, const void *pValue=NULL, const CCopasiContainer *pParent=NULL, const std::string &objectType="Parameter")CCopasiParameter
CCopasiParameterGroup()CCopasiParameterGroupprotected
CCopasiParameterGroup(const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL)CCopasiParameterGroup
CCopasiParameterGroup(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup")CCopasiParameterGroup
CCopasiProblem(const CCopasiTask::Type &type, const CCopasiContainer *pParent=NULL)CCopasiProblemprotected
CCopasiProblem(const CCopasiProblem &src, const CCopasiContainer *pParent=NULL)CCopasiProblem
CFitProblem(const CCopasiTask::Type &type=CCopasiTask::parameterFitting, const CCopasiContainer *pParent=NULL)CFitProblem
CFitProblem(const CFitProblem &src, const CCopasiContainer *pParent=NULL)CFitProblem
checkFunctionalConstraints()CFitProblemvirtual
checkParametricConstraints()COptProblemvirtual
clear()CCopasiParameterGroup
clearDirectDependencies()CCopasiObject
clearRefresh()CCopasiObject
CN enum valueCCopasiParameter
CObjectInterface()CObjectInterfaceinline
Container enum valueCCopasiObjectprotected
COptProblem(const CCopasiTask::Type &type=CCopasiTask::optimization, const CCopasiContainer *pParent=NULL)COptProblem
COptProblem(const COptProblem &src, const CCopasiContainer *pParent=NULL)COptProblem
createObjectiveFunction()CFitProblemprivatevirtual
DataModel enum valueCCopasiObjectprotected
DataObjectSet typedefCCopasiObject
DataUpdateSequence typedefCCopasiObject
dependsOn(DataObjectSet candidates, const DataObjectSet &context=DataObjectSet()) const CCopasiObject
DOUBLE enum valueCCopasiParameter
elevateChildren()CFitProblemvirtual
EmptyListCCopasiContainerstatic
endIndex() const CCopasiParameterGroup
endName() const CCopasiParameterGroup
EXPRESSION enum valueCCopasiParameter
FILE enum valueCCopasiParameter
fixBuild55()CFitProblem
Flag enum nameCCopasiObjectprotected
getAllDependencies(DataObjectSet &dependencies, const DataObjectSet &context) const CCopasiObject
getCalculateStatistics() const COptProblem
getCalculateValue() const COptProblem
getCalculateVariableUpdateMethods() const COptProblem
getChildObjectUnits(const CCopasiObject *pObject) const CCopasiContainervirtual
getCN() const CCopasiParametervirtual
getConstraintList() const COptProblem
getCorrelations() const CFitProblem
getCreateParameterSets() const CFitProblem
getCrossValidationRMS() const CFitProblem
getCrossValidationSD() const CFitProblem
getCrossValidationSet() const CFitProblem
getCrossValidationSolutionValue() const CFitProblem
getDirectDependencies(const DataObjectSet &context=DataObjectSet()) const CCopasiObjectvirtual
getExecutionTime() const COptProblem
getExperiementSet() const CFitProblem
getFisherInformation() const CFitProblem
getFisherInformationEigenvalues() const CFitProblem
getFisherInformationEigenvectors() const CFitProblem
getFunctionEvaluations() const COptProblem
getGroup(const std::string &name)CCopasiParameterGroup
getGroup(const std::string &name) const CCopasiParameterGroup
getGroup(const size_t &index)CCopasiParameterGroup
getGroup(const size_t &index) const CCopasiParameterGroup
getIndex(const std::string &name) const CCopasiParameterGroup
getKey(const std::string &name) const CCopasiParameterGroup
getKey(const size_t &index) const CCopasiParameterGroup
CCopasiParameter::getKey() const CCopasiParametervirtual
getModel() const CCopasiProblem
getName(const size_t &index) const CCopasiParameterGroupvirtual
getObject(const CCopasiObjectName &cn) const CCopasiParameterGroupvirtual
getObjectAncestor(const std::string &type) const CCopasiObject
getObjectDataModel()CCopasiObject
getObjectDataModel() const CCopasiObject
getObjectDisplayName(bool regular=true, bool richtext=false) const CCopasiParametervirtual
getObjectiveFunction()COptProblem
getObjectName() const CCopasiObject
getObjectParent() const CCopasiObject
getObjects() const CCopasiContainervirtual
getObjectType() const CCopasiObject
getOptItem(const size_t &index)COptProblem
getOptItemList() const COptProblem
getOptItemSize() const COptProblem
getParameter(const std::string &name)CCopasiParameterGroup
getParameter(const std::string &name) const CCopasiParameterGroup
getParameter(const size_t &index)CCopasiParameterGroup
getParameter(const size_t &index) const CCopasiParameterGroup
getPrerequisites() const CCopasiObjectvirtual
getRandomizeStartValues() const COptProblem
getRefresh() const CCopasiObjectvirtual
getResiduals() const CFitProblem
getRMS() const CFitProblem
getScaledFisherInformation() const CFitProblem
getScaledFisherInformationEigenvalues() const CFitProblem
getScaledFisherInformationEigenvectors() const CFitProblem
getSolutionValue() const COptProblem
getSolutionVariables() const COptProblem
getStdDeviation() const CFitProblem
getSubtaskType() const COptProblem
getType() const CCopasiProblem
CCopasiParameterGroup::getType(const std::string &name) const CCopasiParameterGroup
CCopasiParameterGroup::getType(const size_t &index) const CCopasiParameterGroup
getUniqueParameterName(const CCopasiParameter *pParameter) const CCopasiParameterGroup
getUnits() const CCopasiContainervirtual
getUpdateMethod() const CCopasiObject
getValue(const std::string &name) const CCopasiParameterGroup
getValue(const size_t &index) const CCopasiParameterGroup
getValue(const std::string &name)CCopasiParameterGroup
getValue(const size_t &index)CCopasiParameterGroup
CCopasiParameter::getValue() const CCopasiParameter
CCopasiParameter::getValue()CCopasiParameter
getValueObject() const CCopasiContainervirtual
getValuePointer() const CCopasiParametervirtual
getValueReference() const CCopasiParameter
getVariableGradients() const COptProblem
getVariableSize() const COptProblem
getVariableStdDeviations() const CFitProblem
GROUP enum valueCCopasiParameter
Gui enum valueCCopasiObjectprotected
hasCircularDependencies(DataObjectSet &candidates, DataObjectSet &verified, const DataObjectSet &context) const CCopasiObject
hasUpdateMethod() const CCopasiObject
incrementEvaluations(unsigned C_INT32 increment)COptProblem
index_iterator typedefCCopasiParameterGroup
initialize()CFitProblemvirtual
initializeParameter()CFitProblemprivate
initializeSubtaskBeforeOutput()COptProblemvirtual
initObjects()CFitProblemprivate
INT enum valueCCopasiParameter
INVALID enum valueCCopasiParameter
isArray() const CCopasiObject
isContainer() const CCopasiObject
isDataModel() const CCopasiObject
isMatrix() const CCopasiObject
isNameVector() const CCopasiObject
isNonUniqueName() const CCopasiObject
isPrerequisiteForContext(const CObjectInterface *pObject, const CMath::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const CCopasiObjectvirtual
isReference() const CCopasiObject
isRoot() const CCopasiObject
isSeparator() const CCopasiObject
isStaticString() const CCopasiObject
isValidValue(const C_FLOAT64 &value) const CCopasiParameter
isValidValue(const C_INT32 &value) const CCopasiParameter
isValidValue(const unsigned C_INT32 &value) const CCopasiParameter
isValidValue(const bool &value) const CCopasiParameter
isValidValue(const std::string &value) const CCopasiParameter
isValidValue(const CCopasiObjectName &value) const CCopasiParameter
isValidValue(const std::vector< CCopasiParameter * > &value) const CCopasiParameter
isValueBool() const CCopasiObject
isValueDbl() const CCopasiObject
isValueInt() const CCopasiObject
isValueInt64() const CCopasiObject
isValueString() const CCopasiObject
isVector() const CCopasiObject
KEY enum valueCCopasiParameter
Matrix enum valueCCopasiObjectprotected
maximize() const COptProblem
mCalculateValueCOptProblemprotected
mConstraintCounterCOptProblemprotected
mCorrelationCFitProblemprivate
mCounterCOptProblemprotected
mCPUTimeCOptProblemprotected
mCrossValidationConstraintRefreshesCFitProblemprivate
mCrossValidationConstraintsCFitProblemprivate
mCrossValidationDependentValuesCFitProblemprivate
mCrossValidationInitialRefreshesCFitProblemprivate
mCrossValidationObjectiveCFitProblemprivate
mCrossValidationRMSCFitProblemprivate
mCrossValidationSDCFitProblemprivate
mCrossValidationSolutionValueCFitProblemprivate
mCrossValidationUndoMethodsCFitProblemprivate
mCrossValidationUpdateMethodsCFitProblemprivate
mExperimentConstraintRefreshesCFitProblemprivate
mExperimentConstraintsCFitProblemprivate
mExperimentDependentValuesCFitProblemprivate
mExperimentInitialRefreshesCFitProblemprivate
mExperimentUndoMethodsCFitProblemprivate
mExperimentUpdateMethodsCFitProblemprivate
mFailedConstraintCounterCOptProblemprotected
mFailedCounterCOptProblemprotected
mFisherCFitProblemprivate
mFisherEigenvaluesCFitProblemprivate
mFisherEigenvectorsCFitProblemprivate
mFisherScaledCFitProblemprivate
mFisherScaledEigenvaluesCFitProblemprivate
mFisherScaledEigenvectorsCFitProblemprivate
mGradientCOptProblemprotected
mHaveStatisticsCOptProblemprotected
mhCounterCOptProblemprotected
mhSolutionValueCOptProblemprotected
mInitialRefreshMethodsCOptProblemprotected
mKeyCCopasiParameterprotected
mObjectsCCopasiContainerprotected
ModelEntity enum valueCCopasiObjectprotected
mOriginalVariablesCOptProblemprotected
mParameterSDCFitProblemprivate
mpCallBackCCopasiProblemprotected
mpConstraintItemsCOptProblemprotected
mpCorrelationMatrixCFitProblemprivate
mpCorrelationMatrixInterfaceCFitProblemprivate
mpCreateParameterSetsCFitProblemprivate
mpCrossValidationSetCFitProblemprivate
mpExperimentSetCFitProblemprivate
mpFisherEigenvaluesMatrixCFitProblemprivate
mpFisherEigenvaluesMatrixInterfaceCFitProblemprivate
mpFisherEigenvectorsMatrixCFitProblemprivate
mpFisherEigenvectorsMatrixInterfaceCFitProblemprivate
mpFisherMatrixCFitProblemprivate
mpFisherMatrixInterfaceCFitProblemprivate
mpFisherScaledEigenvaluesMatrixCFitProblemprivate
mpFisherScaledEigenvaluesMatrixInterfaceCFitProblemprivate
mpFisherScaledEigenvectorsMatrixCFitProblemprivate
mpFisherScaledEigenvectorsMatrixInterfaceCFitProblemprivate
mpFisherScaledMatrixCFitProblemprivate
mpFisherScaledMatrixInterfaceCFitProblemprivate
mpGrpConstraintsCOptProblemprotected
mpGrpItemsCOptProblemprotected
mpInitialStateCFitProblemprivate
mpModelCCopasiProblemprotected
mpObjectiveExpressionCOptProblemprotected
mpOptItemsCOptProblemprotected
mpParmCalculateStatisticsCOptProblemprotected
mpParmMaximizeCOptProblemprotected
mpParmObjectiveExpressionCOptProblemprotected
mpParmRandomizeStartValuesCOptProblemprotected
mpParmSteadyStateCNCFitProblemprivate
mpParmSubtaskCNCOptProblemprotected
mpParmTimeCourseCNCFitProblemprivate
mpReportCCopasiProblemprotected
mpSteadyStateCFitProblemprivate
mpSubtaskCOptProblemmutableprotected
mpTrajectoryCFitProblemprivate
mpTrajectoryProblemCFitProblemprivate
mpValueReferenceCCopasiParametermutableprotected
mRefreshConstraintsCOptProblemprotected
mRefreshMethodsCOptProblemprotected
mResidualsCFitProblemprivate
mRMSCFitProblemprivate
mSDCFitProblemprivate
mSizeCCopasiParameterprotected
mSolutionValueCOptProblemprotected
mSolutionVariablesCOptProblemprotected
mStoreResultsCOptProblemprotected
mThresholdCounterCFitProblemprivate
mTrajectoryUpdateCFitProblemprivate
mUpdateMethodsCOptProblemprotected
mustBeDeleted(const DataObjectSet &deletedObjects) const CCopasiObjectvirtual
mValueCCopasiParameterprotected
mWorstValueCOptProblemprotected
name_iterator typedefCCopasiParameterGroup
NameVector enum valueCCopasiObjectprotected
NonUniqueName enum valueCCopasiObjectprotected
objectMap typedefCCopasiContainer
ObjectSet typedefCObjectInterface
operator<<(std::ostream &os, const CFitProblem &o)CFitProblemfriend
operator=(const CCopasiParameterGroup &rhs)CCopasiParameterGroup
CCopasiParameter::operator=(const CCopasiParameter &rhs)CCopasiParameter
parameterGroup typedefCCopasiParameterGroup
print(std::ostream *ostream) const CFitProblemvirtual
printResult(std::ostream *ostream) const CFitProblemvirtual
randomizeStartValues()COptProblem
Reference enum valueCCopasiObjectprotected
rememberStartValues()COptProblem
remove(CCopasiObject *pObject)CCopasiContainervirtual
removeDirectDependency(const CCopasiObject *pObject)CCopasiObject
removeOptItem(const size_t &index)COptProblem
removeParameter(const std::string &name)CCopasiParameterGroup
removeParameter(const size_t &index)CCopasiParameterGroup
reset()COptProblem
resetEvaluations()COptProblem
restore(const bool &updateModel)CFitProblemvirtual
restoreModel(const bool &updateModel)COptProblem
Root enum valueCCopasiObjectprotected
Separator enum valueCCopasiObjectprotected
setCalculateStatistics(const bool &calculate)COptProblem
setCallBack(CProcessReport *pCallBack)CFitProblemvirtual
setCreateParameterSets(const bool &create)CFitProblem
setDirectDependencies(const DataObjectSet &directDependencies)CCopasiObject
setMaximize(const bool &maximize)COptProblem
setModel(CModel *pModel)CFitProblemvirtual
setObjectiveFunction(const std::string &infix)COptProblem
setObjectName(const std::string &name)CCopasiObject
setObjectParent(const CCopasiContainer *pParent)CCopasiObjectvirtual
setObjectValue(const C_FLOAT64 &value)CCopasiObject
setObjectValue(const C_INT32 &value)CCopasiObject
setObjectValue(const bool &value)CCopasiObject
setRandomizeStartValues(const bool &randomize)COptProblem
setRefresh(CType *pType, void(CType::*method)(void))CCopasiObjectinline
setRenameHandler(CRenameHandler *rh)CCopasiObjectinlinestatic
setResidualsRequired(const bool &required)CFitProblem
setSolution(const C_FLOAT64 &value, const CVector< C_FLOAT64 > &variables)CFitProblemvirtual
setSubtaskType(const CCopasiTask::Type &subtaskType)COptProblem
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &))CCopasiObjectinline
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &))CCopasiObjectinline
setUpdateMethod(CType *pType, void(CType::*method)(const bool &))CCopasiObjectinline
setValue(const std::string &name, const CType &value)CCopasiParameterGroupinline
setValue(const size_t &index, const CType &value)CCopasiParameterGroupinline
CCopasiParameter::setValue(const CType &value)CCopasiParameterinline
CCopasiParameter::setValue(const std::vector< CCopasiParameter * > &value)CCopasiParameter
size() const CCopasiParameterGroup
smpRenameHandlerCCopasiObjectprotectedstatic
StaticString enum valueCCopasiObjectprotected
STRING enum valueCCopasiParameter
swap(const size_t &iFrom, const size_t &iTo)CCopasiParameterGroup
swap(index_iterator &from, index_iterator &to)CCopasiParameterGroup
swapOptItem(const size_t &iFrom, const size_t &iTo)COptProblem
Type enum nameCCopasiParameter
TypeNameCCopasiParameterstatic
UDOUBLE enum valueCCopasiParameter
UINT enum valueCCopasiParameter
updateInitialState()CFitProblem
UpdateSequence typedefCObjectInterface
ValidSubtasksCOptProblemstatic
ValueBool enum valueCCopasiObjectprotected
ValueDbl enum valueCCopasiObjectprotected
ValueInt enum valueCCopasiObjectprotected
ValueInt64 enum valueCCopasiObjectprotected
ValueString enum valueCCopasiObjectprotected
Vector enum valueCCopasiObjectprotected
XMLTypeCCopasiParameterstatic
~CCopasiContainer()CCopasiContainervirtual
~CCopasiObject()CCopasiObjectvirtual
~CCopasiParameter()CCopasiParametervirtual
~CCopasiParameterGroup()CCopasiParameterGroupvirtual
~CCopasiProblem()CCopasiProblemvirtual
~CFitProblem()CFitProblemvirtual
~CObjectInterface()CObjectInterfaceinlinevirtual
~COptProblem()COptProblemvirtual