COPASI API  4.16.103
CExperiment Member List

This is the complete list of members for CExperiment, including all inherited members.

add(CCopasiObject *pObject, const bool &adopt=true)CCopasiContainervirtual
addDirectDependency(const CCopasiObject *pObject)CCopasiObject
addGroup(const std::string &name)CCopasiParameterGroup
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
addParameter(const CCopasiParameter &parameter)CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type)CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type, const CType &value)CCopasiParameterGroupinline
addParameter(CCopasiParameter *pParameter)CCopasiParameterGroup
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainerinlineprotected
Array enum valueCCopasiObjectprotected
assertGroup(const std::string &name)CCopasiParameterGroup
assertParameter(const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue)CCopasiParameterGroupinline
beginIndex() const CCopasiParameterGroup
beginName() const CCopasiParameterGroup
BOOL enum valueCCopasiParameter
buildUpdateSequence(const DataObjectSet &objects, const DataObjectSet &uptoDateObjects, const DataObjectSet &context=DataObjectSet())CCopasiObjectstatic
calculateStatistics()CExperiment
calculateWeights()CExperiment
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)CCopasiContainer
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)CCopasiContainer
CCopasiObject()CCopasiObjectprotected
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)CCopasiObjectprotected
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL)CCopasiObject
CCopasiParameter(const CCopasiParameter &src, const CCopasiContainer *pParent=NULL)CCopasiParameter
CCopasiParameter(const std::string &name, const Type &type, const void *pValue=NULL, const CCopasiContainer *pParent=NULL, const std::string &objectType="Parameter")CCopasiParameter
CCopasiParameterGroup()CCopasiParameterGroupprotected
CCopasiParameterGroup(const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL)CCopasiParameterGroup
CCopasiParameterGroup(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup")CCopasiParameterGroup
CExperiment(const CCopasiContainer *pParent, const std::string &name="Experiment")CExperiment
CExperiment(const CExperiment &src, const CCopasiContainer *pParent=NULL)CExperiment
CExperiment(const CCopasiParameterGroup &group, const CCopasiContainer *pParent=NULL)CExperiment
clear()CCopasiParameterGroup
clearDirectDependencies()CCopasiObject
clearRefresh()CCopasiObject
CN enum valueCCopasiParameter
CObjectInterface()CObjectInterfaceinline
compare(const CExperiment *lhs, const CExperiment *rhs)CExperimentstatic
compile(const std::vector< CCopasiContainer * > listOfContainer=CCopasiContainer::EmptyList)CExperiment
Container enum valueCCopasiObjectprotected
DataModel enum valueCCopasiObjectprotected
DataObjectSet typedefCCopasiObject
DataUpdateSequence typedefCCopasiObject
dependent enum valueCExperiment
dependsOn(DataObjectSet candidates, const DataObjectSet &context=DataObjectSet()) const CCopasiObject
DOUBLE enum valueCCopasiParameter
elevateChildren()CExperimentvirtual
EmptyListCCopasiContainerstatic
endIndex() const CCopasiParameterGroup
endName() const CCopasiParameterGroup
EXPRESSION enum valueCCopasiParameter
extendedTimeSeriesSize() const CExperiment
FILE enum valueCCopasiParameter
fixBuild55()CExperiment
Flag enum nameCCopasiObjectprotected
getAllDependencies(DataObjectSet &dependencies, const DataObjectSet &context) const CCopasiObject
getChildObjectUnits(const CCopasiObject *pObject) const CCopasiContainervirtual
getCN() const CCopasiParametervirtual
getColumnNames() const CExperiment
getColumnValidValueCount(CCopasiObject *const &pObject) const CExperiment
getDefaultScale(const CCopasiObject *const &pObject) const CExperiment
getDependentData() const CExperiment
getDependentObjects() const CExperiment
getDirectDependencies(const DataObjectSet &context=DataObjectSet()) const CCopasiObjectvirtual
getErrorMean() const CExperiment
getErrorMeanSD() const CExperiment
getErrorMeanSD(CCopasiObject *const &pObject, const C_FLOAT64 &errorMean) const CExperiment
getErrorSum(CCopasiObject *const &pObject) const CExperiment
getExperimentType() const CExperiment
getFileName() const CExperiment
getFirstRow() const CExperiment
getFittingPoints() const CExperiment
getGroup(const std::string &name)CCopasiParameterGroup
getGroup(const std::string &name) const CCopasiParameterGroup
getGroup(const size_t &index)CCopasiParameterGroup
getGroup(const size_t &index) const CCopasiParameterGroup
getHeaderRow() const CExperiment
getIndependentData() const CExperiment
getIndependentObjects() const CExperiment
getIndex(const std::string &name) const CCopasiParameterGroup
getKey(const std::string &name) const CCopasiParameterGroup
getKey(const size_t &index) const CCopasiParameterGroup
CCopasiParameter::getKey() const CCopasiParametervirtual
getLastRow() const CExperiment
getName(const size_t &index) const CCopasiParameterGroupvirtual
getNormalizeWeightsPerExperiment() const CExperiment
getNumColumns() const CExperiment
getNumDataRows() const CExperiment
getObject(const CCopasiObjectName &cn) const CCopasiParameterGroupvirtual
getObjectAncestor(const std::string &type) const CCopasiObject
getObjectDataModel()CCopasiObject
getObjectDataModel() const CCopasiObject
getObjectDisplayName(bool regular=true, bool richtext=false) const CCopasiParametervirtual
getObjectiveValue() const CExperiment
getObjectiveValue(CCopasiObject *const &pObject) const CExperiment
getObjectMap()CExperiment
getObjectName() const CCopasiObject
getObjectParent() const CCopasiObject
getObjects() const CCopasiContainervirtual
getObjectType() const CCopasiObject
getParameter(const std::string &name)CCopasiParameterGroup
getParameter(const std::string &name) const CCopasiParameterGroup
getParameter(const size_t &index)CCopasiParameterGroup
getParameter(const size_t &index) const CCopasiParameterGroup
getPrerequisites() const CCopasiObjectvirtual
getRefresh() const CCopasiObjectvirtual
getRMS() const CExperiment
getRMS(CCopasiObject *const &pObject) const CExperiment
getSeparator() const CExperiment
getTimeData() const CExperiment
getType(const std::string &name) const CCopasiParameterGroup
getType(const size_t &index) const CCopasiParameterGroup
CCopasiParameter::getType() const CCopasiParameter
getUniqueParameterName(const CCopasiParameter *pParameter) const CCopasiParameterGroup
getUnits() const CCopasiContainervirtual
getUpdateMethod() const CCopasiObject
getValue(const std::string &name) const CCopasiParameterGroup
getValue(const size_t &index) const CCopasiParameterGroup
getValue(const std::string &name)CCopasiParameterGroup
getValue(const size_t &index)CCopasiParameterGroup
CCopasiParameter::getValue() const CCopasiParameter
CCopasiParameter::getValue()CCopasiParameter
getValueObject() const CCopasiContainervirtual
getValuePointer() const CCopasiParametervirtual
getValueReference() const CCopasiParameter
getWeightMethod() const CExperiment
GROUP enum valueCCopasiParameter
guessColumnNumber() const CExperiment
Gui enum valueCCopasiObjectprotected
hasCircularDependencies(DataObjectSet &candidates, DataObjectSet &verified, const DataObjectSet &context) const CCopasiObject
hasUpdateMethod() const CCopasiObject
ignore enum valueCExperiment
independent enum valueCExperiment
index_iterator typedefCCopasiParameterGroup
initExtendedTimeSeries(size_t s)CExperiment
initializeParameter()CExperimentprivate
initializeScalingMatrix()CExperimentprivate
initObjects()CCopasiContainerprotected
INT enum valueCCopasiParameter
INVALID enum valueCCopasiParameter
isArray() const CCopasiObject
isContainer() const CCopasiObject
isDataModel() const CCopasiObject
isMatrix() const CCopasiObject
isNameVector() const CCopasiObject
isNonUniqueName() const CCopasiObject
isPrerequisiteForContext(const CObjectInterface *pObject, const CMath::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const CCopasiObjectvirtual
isReference() const CCopasiObject
isRoot() const CCopasiObject
isRowOriented() const CExperiment
isSeparator() const CCopasiObject
isStaticString() const CCopasiObject
isValidValue(const C_FLOAT64 &value) const CCopasiParameter
isValidValue(const C_INT32 &value) const CCopasiParameter
isValidValue(const unsigned C_INT32 &value) const CCopasiParameter
isValidValue(const bool &value) const CCopasiParameter
isValidValue(const std::string &value) const CCopasiParameter
isValidValue(const CCopasiObjectName &value) const CCopasiParameter
isValidValue(const std::vector< CCopasiParameter * > &value) const CCopasiParameter
isValueBool() const CCopasiObject
isValueDbl() const CCopasiObject
isValueInt() const CCopasiObject
isValueInt64() const CCopasiObject
isValueString() const CCopasiObject
isVector() const CCopasiObject
KEY enum valueCCopasiParameter
Matrix enum valueCCopasiObjectprotected
mColumnNameCExperimentprivate
mColumnObjectiveValueCExperimentprivate
mColumnRMSCExperimentprivate
mColumnScaleCExperimentprivate
mColumnValidValueCountCExperimentprivate
mDataDependentCExperimentprivate
mDataIndependentCExperimentprivate
mDataTimeCExperimentprivate
mDefaultColumnScaleCExperimentprivate
mDependentObjectsCExperimentprivate
mDependentValuesCExperimentprivate
MEAN enum valueCExperiment
MEAN_SQUARE enum valueCExperiment
mExtendedTimeSeriesCExperimentprivate
mExtendedTimeSeriesSizeCExperimentprivate
mFittingPointsCExperimentprivate
mIndependentObjectsCExperimentprivate
mIndependentUpdateMethodsCExperimentprivate
mIndependentValuesCExperimentprivate
mKeyCCopasiParameterprotected
mMeanCExperimentprivate
mMeansCExperimentprivate
mMeanSDCExperimentprivate
mMissingDataCExperimentprivate
mNumDataRowsCExperimentprivate
mObjectiveValueCExperimentprivate
mObjectsCCopasiContainerprotected
ModelEntity enum valueCCopasiObjectprotected
mpDataDependentCalculatedCExperimentprivate
mpFileNameCExperimentprivate
mpFirstRowCExperimentprivate
mpHeaderRowCExperimentprivate
mpLastRowCExperimentprivate
mpNormalizeWeightsPerExperimentCExperimentprivate
mpNumColumnsCExperimentprivate
mpObjectMapCExperimentprivate
mpRowOrientedCExperimentprivate
mpSeparatorCExperimentprivate
mpTaskTypeCExperimentprivate
mpValueReferenceCCopasiParametermutableprotected
mpWeightMethodCExperimentprivate
mRefreshMethodsCExperimentprivate
mRMSCExperimentprivate
mRowObjectiveValueCExperimentprivate
mRowRMSCExperimentprivate
mScaleCExperimentprivate
mSizeCCopasiParameterprotected
mStorageItCExperimentprivate
mustBeDeleted(const DataObjectSet &deletedObjects) const CCopasiObjectvirtual
mValueCCopasiParameterprotected
name_iterator typedefCCopasiParameterGroup
NameVector enum valueCCopasiObjectprotected
NonUniqueName enum valueCCopasiObjectprotected
objectMap typedefCCopasiContainer
ObjectSet typedefCObjectInterface
operator=(const CExperiment &rhs)CExperiment
CCopasiParameterGroup::operator=(const CCopasiParameterGroup &rhs)CCopasiParameterGroup
CCopasiParameter::operator=(const CCopasiParameter &rhs)CCopasiParameter
operator==(const CExperiment &lhs, const CExperiment &rhs)CExperimentfriend
parameterGroup typedefCCopasiParameterGroup
print(std::ostream *ostream) const CCopasiParameterGroupvirtual
printResult(std::ostream *ostream) const CExperimentvirtual
read(std::istream &in, size_t &currentLine)CExperiment
readColumnNames()CExperiment
Reference enum valueCCopasiObjectprotected
remove(CCopasiObject *pObject)CCopasiContainervirtual
removeDirectDependency(const CCopasiObject *pObject)CCopasiObject
removeParameter(const std::string &name)CCopasiParameterGroup
removeParameter(const size_t &index)CCopasiParameterGroup
restoreModelIndependentData()CExperiment
Root enum valueCCopasiObjectprotected
SD enum valueCExperiment
Separator enum valueCCopasiObjectprotected
setDirectDependencies(const DataObjectSet &directDependencies)CCopasiObject
setExperimentType(const CCopasiTask::Type &type)CExperiment
setFileName(const std::string &fileName)CExperiment
setFirstRow(const unsigned C_INT32 &firstRow)CExperiment
setHeaderRow(const unsigned C_INT32 &headerRow)CExperiment
setIsRowOriented(const bool &isRowOriented)CExperiment
setLastRow(const unsigned C_INT32 &lastRow)CExperiment
setNormalizeWeightsPerExperiment(bool flag)CExperiment
setNumColumns(const unsigned C_INT32 &cols)CExperiment
setObjectName(const std::string &name)CCopasiObject
setObjectParent(const CCopasiContainer *pParent)CCopasiObjectvirtual
setObjectValue(const C_FLOAT64 &value)CCopasiObject
setObjectValue(const C_INT32 &value)CCopasiObject
setObjectValue(const bool &value)CCopasiObject
setRefresh(CType *pType, void(CType::*method)(void))CCopasiObjectinline
setRenameHandler(CRenameHandler *rh)CCopasiObjectinlinestatic
setSeparator(const std::string &seperator)CExperiment
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &))CCopasiObjectinline
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &))CCopasiObjectinline
setUpdateMethod(CType *pType, void(CType::*method)(const bool &))CCopasiObjectinline
setValue(const std::string &name, const CType &value)CCopasiParameterGroupinline
setValue(const size_t &index, const CType &value)CCopasiParameterGroupinline
CCopasiParameter::setValue(const CType &value)CCopasiParameterinline
CCopasiParameter::setValue(const std::vector< CCopasiParameter * > &value)CCopasiParameter
setWeightMethod(const WeightMethod &weightMethod)CExperiment
size() const CCopasiParameterGroup
smpRenameHandlerCCopasiObjectprotectedstatic
StaticString enum valueCCopasiObjectprotected
storeExtendedTimeSeriesData(C_FLOAT64 time)CExperiment
STRING enum valueCCopasiParameter
sumOfSquares(const size_t &index, C_FLOAT64 *&residuals) const CExperiment
sumOfSquaresStore(const size_t &index, C_FLOAT64 *&dependentValues)CExperiment
swap(const size_t &iFrom, const size_t &iTo)CCopasiParameterGroup
swap(index_iterator &from, index_iterator &to)CCopasiParameterGroup
time enum valueCExperiment
Type enum nameCExperiment
TypeNameCExperimentstatic
UDOUBLE enum valueCCopasiParameter
UINT enum valueCCopasiParameter
updateFittedPoints()CExperiment
updateFittedPointValues(const size_t &index, bool includeSimulation)CExperiment
updateFittedPointValuesFromExtendedTimeSeries(const size_t &index)CExperiment
updateModelWithIndependentData(const size_t &index)CExperiment
UpdateSequence typedefCObjectInterface
VALUE_SCALING enum valueCExperiment
ValueBool enum valueCCopasiObjectprotected
ValueDbl enum valueCCopasiObjectprotected
ValueInt enum valueCCopasiObjectprotected
ValueInt64 enum valueCCopasiObjectprotected
ValueString enum valueCCopasiObjectprotected
Vector enum valueCCopasiObjectprotected
WeightMethod enum nameCExperiment
WeightMethodNameCExperimentstatic
WeightMethodTypeCExperimentstatic
XMLTypeCExperimentstatic
~CCopasiContainer()CCopasiContainervirtual
~CCopasiObject()CCopasiObjectvirtual
~CCopasiParameter()CCopasiParametervirtual
~CCopasiParameterGroup()CCopasiParameterGroupvirtual
~CExperiment()CExperimentvirtual
~CObjectInterface()CObjectInterfaceinlinevirtual