| __SIZE enum value | CDataObject | |
| add(CDataObject *pObject, const bool &adopt=true) | CDataContainer | virtual |
| addIssue(const CIssue &issue) | CDataObject | |
| addMatrixReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
| addObjectReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
| addReference(const CDataContainer *pReference) | CDataObject | |
| addVectorReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | protected |
| appendDeletedDependentData(CUndoData &undoData) const | CDataContainer | virtual |
| applyData(const CData &data, CUndoData::CChangeSet &changes) | CCopasiTask | virtual |
| Array enum value | CDataObject | |
| calculateValue() override | CDataObject | virtual |
| CAnalyticsTask() | CAnalyticsTask | private |
| CAnalyticsTask(const CDataContainer *pParent, const CTaskEnum::Task &type=CTaskEnum::Task::analytics) | CAnalyticsTask | |
| CAnalyticsTask(const CAnalyticsTask &src, const CDataContainer *pParent=NULL) | CAnalyticsTask | |
| CCopasiTask() | CCopasiTask | private |
| CCopasiTask(const CDataContainer *pParent, const CTaskEnum::Task &taskType, const std::string &type="Task") | CCopasiTask | |
| CCopasiTask(const CCopasiTask &src, const CDataContainer *pParent) | CCopasiTask | |
| CDataContainer() | CDataContainer | private |
| CDataContainer(const CDataContainer &src) | CDataContainer | protected |
| CDataContainer(const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataContainer | |
| CDataContainer(const CDataContainer &src, const CDataContainer *pParent) | CDataContainer | |
| CDataObject() | CDataObject | protected |
| CDataObject(const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None) | CDataObject | protected |
| CDataObject(const CDataObject &src, const CDataContainer *pParent=NULL) | CDataObject | |
| cleanup() | CTrajectoryTask | private |
| clearCallBack() | CCopasiTask | virtual |
| CObjectInterface() | CObjectInterface | |
| CObjectInterface(const CObjectInterface &src) | CObjectInterface | |
| computeSelectedStatistics(std::vector< C_FLOAT64 >, std::vector< C_FLOAT64 >) | CAnalyticsTask | private |
| Container enum value | CDataObject | |
| ContainerList typedef | CObjectInterface | |
| createEvent() | CAnalyticsTask | |
| createUndoData(CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const | CCopasiTask | virtual |
| CTrajectoryTask() | CTrajectoryTask | private |
| CTrajectoryTask(const CDataContainer *pParent, const CTaskEnum::Task &type=CTaskEnum::Task::timeCourse) | CTrajectoryTask | |
| CTrajectoryTask(const CTrajectoryTask &src, const CDataContainer *pParent) | CTrajectoryTask | |
| CUndoObjectInterface() | CUndoObjectInterface | |
| CUndoObjectInterface(const CUndoObjectInterface &src) | CUndoObjectInterface | |
| DataModel enum value | CDataObject | |
| DataObject(const CObjectInterface *pInterface) | CObjectInterface | static |
| DataObjectSet typedef | CDataObject | |
| destruct() override | CDataObject | virtual |
| DisplayName enum value | CDataObject | |
| EmptyList | CDataContainer | static |
| eOutputFlagBase enum name | CCopasiTask | |
| Error | CCopasiTask | |
| eventCallBack(void *pData, void *pCaller) | CAnalyticsTask | private |
| finish() | CAnalyticsTask | private |
| FINISH enum value | CAnalyticsTask | private |
| Flag enum name | CDataObject | |
| fromData(const CData &data, CUndoObjectInterface *pParent) | CCopasiTask | static |
| generateUuid() | CUndoObjectInterface | |
| getCallBack() const | CCopasiTask | |
| getChildObjectUnits(const CDataObject *pObject) const | CDataContainer | virtual |
| getCN() const override | CDataObject | virtual |
| getDataObject() const override | CDataObject | virtual |
| getDescendants(CDataObject::DataObjectSet &descendants, const bool &recursive=false) const | CDataContainer | |
| getDescription() const | CCopasiTask | |
| getIndex(const CDataObject *pObject) const | CDataContainer | virtual |
| getKey() const | CCopasiTask | virtual |
| getMathContainer() const | CCopasiTask | |
| getMethod() | CCopasiTask | |
| getMethod() const | CCopasiTask | |
| getObject(const CCommonName &cn) const override | CDataContainer | virtual |
| getObjectAncestor(const std::string &type) const | CDataObject | |
| getObjectDataModel() const | CDataObject | |
| getObjectDisplayName() const override | CDataObject | virtual |
| getObjectFromCN(const CCommonName &cn) const | CDataObject | |
| GetObjectFromCN(const ContainerList &listOfContainer, const CCommonName &objName) | CObjectInterface | static |
| getObjectName() const | CDataObject | |
| getObjectParent() const | CDataObject | |
| getObjects() const | CDataContainer | virtual |
| getObjects() | CDataContainer | virtual |
| getObjectType() const | CDataObject | |
| getOutputHandler() const | CCopasiTask | |
| getOutputMode() const | CCopasiTask | inline |
| getPrerequisites() const override | CDataObject | virtual |
| getProblem() | CCopasiTask | |
| getProblem() const | CCopasiTask | |
| getReport() | CCopasiTask | |
| getReport() const | CCopasiTask | |
| getResult() const | CCopasiTask | |
| getSliders() | CCopasiTask | |
| getTimeSeries() const | CTrajectoryTask | |
| getType() const | CCopasiTask | |
| getUnits() const override | CDataContainer | virtual |
| getUuid() const | CUndoObjectInterface | |
| getValidity() const override | CDataObject | virtual |
| getValidMethods() const override | CAnalyticsTask | virtual |
| getValueObject() const override | CDataContainer | virtual |
| getValuePointer() const override | CDataObject | virtual |
| Gui enum value | CDataObject | |
| hasFlag(const Flag &flag) const | CDataObject | |
| initialize(const OutputFlag &of, COutputHandler *pOutputHandler, std::ostream *pOstream) override | CAnalyticsTask | virtual |
| INITIALIZE enum value | CCopasiTask | |
| initObjects() | CAnalyticsTask | private |
| insert(const CData &data) override | CDataContainer | virtual |
| isPrerequisiteForContext(const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override | CDataObject | virtual |
| isScheduled() const | CCopasiTask | |
| isTaskValid() const | CCopasiTask | protected |
| isUpdateModel() const | CCopasiTask | |
| isValidMethod(const CTaskEnum::Method &method, const CTaskEnum::Method *validMethods) | CCopasiTask | static |
| load(CReadConfig &configBuffer) | CTrajectoryTask | |
| mAggregateValidity | CDataObject | private |
| MAIN enum value | CAnalyticsTask | private |
| Matrix enum value | CDataObject | |
| mAverageFreq | CAnalyticsTask | private |
| mAveragePeriod | CAnalyticsTask | private |
| mContainerState | CTrajectoryTask | protected |
| mDescription | CCopasiTask | protected |
| mDoOutput | CCopasiTask | protected |
| mFreq | CAnalyticsTask | private |
| mhProgress | CAnalyticsTask | private |
| mIgnoreProblemData | CCopasiTask | protected |
| mIndex | CAnalyticsTask | private |
| mInitialState | CCopasiTask | protected |
| mKey | CCopasiTask | protected |
| mLastFreq | CAnalyticsTask | private |
| mLastPeriod | CAnalyticsTask | private |
| mMaxNumCrossings | CAnalyticsTask | private |
| mNumCrossings | CAnalyticsTask | private |
| mObjectDisplayName | CDataObject | mutableprivate |
| mObjectFlag | CDataObject | private |
| mObjectName | CDataObject | private |
| mObjects | CDataContainer | protected |
| mObjectType | CDataObject | private |
| ModelEntity enum value | CDataObject | |
| mOutputCounter | CCopasiTask | protected |
| mOutputStartNumCrossings | CAnalyticsTask | private |
| mOutputStartTime | CTrajectoryTask | protected |
| mpAnalyticsProblem | CAnalyticsTask | private |
| mpContainer | CCopasiTask | protected |
| mpContainerStateTime | CTrajectoryTask | protected |
| mPeriod | CAnalyticsTask | private |
| mPeriodicity | CAnalyticsTask | private |
| mpEvent | CAnalyticsTask | private |
| mpEventCallback | CAnalyticsTask | private |
| mpLess | CTrajectoryTask | protected |
| mpLessOrEqual | CTrajectoryTask | protected |
| mpMethod | CCopasiTask | protected |
| mpObjectDisplayName | CDataObject | mutableprivate |
| mpObjectName | CDataObject | mutableprivate |
| mpObjectParent | CDataObject | private |
| mpObjectRate | CAnalyticsTask | private |
| mpObjectSelected | CAnalyticsTask | private |
| mpOutputHandler | CCopasiTask | protected |
| mpProblem | CCopasiTask | protected |
| mPrerequisits | CDataObject | protected |
| mpResultAnnotation | CAnalyticsTask | private |
| mPreviousCrossingTime | CAnalyticsTask | private |
| mProcessReport | CCopasiTask | protected |
| mProgressFactor | CAnalyticsTask | private |
| mProgressMax | CAnalyticsTask | private |
| mProgressValue | CAnalyticsTask | private |
| mpSelectedObject | CAnalyticsTask | private |
| mpSliders | CCopasiTask | protected |
| mpStatValAnn | CAnalyticsTask | private |
| mpSteadyState | CTrajectoryTask | protected |
| mpTrajectoryMethod | CTrajectoryTask | protected |
| mpTrajectoryProblem | CTrajectoryTask | protected |
| mpUuid | CUndoObjectInterface | private |
| mReferencedValidities | CDataObject | private |
| mReferences | CDataObject | protected |
| mReport | CCopasiTask | protected |
| mResult | CCopasiTask | protected |
| mScheduled | CCopasiTask | protected |
| mStartTime | CAnalyticsTask | private |
| mState | CAnalyticsTask | private |
| mStatesRing | CAnalyticsTask | private |
| mStatesRingCounter | CAnalyticsTask | private |
| mStatTime | CAnalyticsTask | private |
| mStatVal | CAnalyticsTask | private |
| mTimes | CAnalyticsTask | private |
| mTimeSeries | CTrajectoryTask | protected |
| mTimeSeriesRequested | CTrajectoryTask | protected |
| mType | CCopasiTask | protected |
| mUpdateModel | CCopasiTask | protected |
| mUpdateMoieties | CTrajectoryTask | protected |
| mUuidLocked | CUndoObjectInterface | private |
| mValidity | CObjectInterface | mutableprotected |
| mValues | CAnalyticsTask | private |
| mValuesSeries | CAnalyticsTask | private |
| NameVector enum value | CDataObject | |
| NO_OUTPUT enum value | CCopasiTask | |
| NonUniqueName enum value | CDataObject | |
| objectMap typedef | CDataContainer | |
| objectRenamed(CDataObject *pObject, const std::string &oldName) | CDataContainer | |
| ObjectSet typedef | CObjectInterface | |
| ONLY_TIME_SERIES enum value | CCopasiTask | |
| output(const COutputInterface::Activity &activity) | CCopasiTask | virtual |
| OUTPUT enum value | CCopasiTask | |
| OUTPUT_AFTER enum value | CCopasiTask | |
| OUTPUT_BEFORE enum value | CCopasiTask | |
| OUTPUT_DURING enum value | CCopasiTask | |
| OUTPUT_SE enum value | CCopasiTask | |
| OUTPUT_UI enum value | CCopasiTask | |
| OutputFlag enum name | CCopasiTask | |
| PLOT enum value | CCopasiTask | |
| prerequisitsContains(const DataObjectSet &objects) const | CDataObject | |
| print(std::ostream *ostream) const override | CDataObject | virtual |
| process(const bool &useInitialValues) override | CAnalyticsTask | virtual |
| processStart(const bool &useInitialValues) | CTrajectoryTask | |
| processStep(const C_FLOAT64 &nextTime, const bool &final=false) | CTrajectoryTask | |
| processTrajectory(const bool &useInitialValues) | CTrajectoryTask | virtual |
| processValues(const bool &useInitialValues) | CTrajectoryTask | virtual |
| pStats | CAnalyticsTask | private |
| pStatsTime | CAnalyticsTask | private |
| Reference enum value | CDataObject | |
| refreshAggregateValidity() | CDataObject | private |
| relativeDifferenceOfStates(const CVectorCore< C_FLOAT64 > &s1, const CVectorCore< C_FLOAT64 > &s2) | CAnalyticsTask | private |
| remove(CDataObject *pObject) | CDataContainer | virtual |
| removeEvent() | CAnalyticsTask | |
| removeIssue(const CIssue &issue) | CDataObject | |
| removeReference(const CDataContainer *pReference) | CDataObject | |
| REPORT enum value | CCopasiTask | |
| restore(const bool &updateModel=true) override | CAnalyticsTask | virtual |
| Root enum value | CDataObject | |
| sanitizeObjectName(std::string &name) | CDataObject | static |
| separate(const COutputInterface::Activity &activity) | CCopasiTask | virtual |
| Separator enum value | CDataObject | |
| setCallBack(CProcessReportLevel callBack) | CCopasiTask | virtual |
| setEventCallback(const bool &set) | CAnalyticsTask | private |
| setIgnoreProblemData(const bool &ignoreProblemData) | CCopasiTask | |
| setMathContainer(CMathContainer *pContainer) | CCopasiTask | |
| setMethodType(const CTaskEnum::Method &type) | CCopasiTask | |
| setObjectName(const std::string &name) | CDataObject | |
| setObjectParent(const CDataContainer *pParent) | CDataObject | virtual |
| setScheduled(const bool &scheduled) | CCopasiTask | |
| setType(const CTaskEnum::Task &type) | CCopasiTask | |
| setUpdateModel(const bool &updateModel) | CCopasiTask | virtual |
| setUuid(const xg::Guid &uuid) | CUndoObjectInterface | |
| setUuid(const std::string &uuid) | CUndoObjectInterface | |
| signalMathContainerChanged() | CTrajectoryTask | protectedvirtual |
| signalMethodChanged() | CTrajectoryTask | protectedvirtual |
| STATE enum name | CAnalyticsTask | private |
| StaticString enum value | CDataObject | |
| STREAM enum value | CCopasiTask | |
| TIME_SERIES enum value | CCopasiTask | |
| toData() const | CCopasiTask | virtual |
| TRANSIENT enum value | CAnalyticsTask | private |
| updateIndex(const size_t &index, const CUndoObjectInterface *pUndoObject) | CUndoObjectInterface | virtual |
| updateMatrices() | CCopasiTask | inlinevirtual |
| validityChanged(const CValidity &changedValidity) override | CDataObject | virtual |
| validityRemoved(const CValidity &changedValidity) | CDataObject | |
| ValidMethods | CTrajectoryTask | static |
| ValueBool enum value | CDataObject | |
| ValueDbl enum value | CDataObject | |
| ValueInt enum value | CDataObject | |
| ValueInt64 enum value | CDataObject | |
| ValueString enum value | CDataObject | |
| Vector enum value | CDataObject | |
| Warning | CCopasiTask | |
| ~CAnalyticsTask() | CAnalyticsTask | |
| ~CCopasiTask() | CCopasiTask | virtual |
| ~CDataContainer() | CDataContainer | virtual |
| ~CDataObject() | CDataObject | virtual |
| ~CObjectInterface() | CObjectInterface | virtual |
| ~CTrajectoryTask() | CTrajectoryTask | |
| ~CUndoObjectInterface() | CUndoObjectInterface | virtual |
1.9.1