CMassAction Member List

This is the complete list of members for CMassAction, including all inherited members.

__SIZE enum value	CDataObject
add(CDataObject *pObject, const bool &adopt=true)	CDataContainer	virtual
addIssue(const CIssue &issue)	CDataObject
addMatrixReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)	CDataContainer	protected
addObjectReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)	CDataContainer	protected
addReference(const CDataContainer *pReference)	CDataObject
addUnsupportedAnnotation(const std::string &name, const std::string &xml)	CAnnotation
addVariable(const std::string &name, CFunctionParameter::Role usage=CFunctionParameter::Role::VARIABLE, const CFunctionParameter::DataType &type=CFunctionParameter::DataType::FLOAT64)	CFunction
addVectorReference(const std::string &name, CType &reference, const CFlags< Flag > &flag=CFlags< Flag >::None)	CDataContainer	protected
allocateMiriamInfo(CDataContainer *pParent)	CAnnotation	static
appendDeletedDependentData(CUndoData &undoData) const	CDataContainer	virtual
applyData(const CData &data, CUndoData::CChangeSet &changes)	CFunction	virtual
Array enum value	CDataObject
buildCalculationSequence()	CEvaluationTree	protected
calculate()	CEvaluationTree	protected
calculateValue() override	CDataObject	virtual
calcValue(const CCallParameters< C_FLOAT64 > &callParameters)	CMassAction	virtual
calls(std::set< std::string > &list) const	CEvaluationTree
CAnnotation()	CAnnotation
CAnnotation(const CAnnotation &src)	CAnnotation
castObject(CDataObject *pObject)	CAnnotation	static
castObject(const CDataObject *pObject)	CAnnotation	static
CDataContainer()	CDataContainer	private
CDataContainer(const CDataContainer &src)	CDataContainer	protected
CDataContainer(const std::string &name, const CDataContainer *pParent=NO_PARENT, const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)	CDataContainer
CDataContainer(const CDataContainer &src, const CDataContainer *pParent)	CDataContainer
CDataObject()	CDataObject	protected
CDataObject(const std::string &name, const CDataContainer *pParent=static_cast< CDataContainer * >((void *) 0), const std::string &type="CN", const CFlags< Flag > &flag=CFlags< Flag >::None)	CDataObject	protected
CDataObject(const CDataObject &src, const CDataContainer *pParent=NULL)	CDataObject
CEvaluationTree(const CEvaluationTree &src)	CEvaluationTree	protected
CEvaluationTree(const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT, const Type &type=Function)	CEvaluationTree
CEvaluationTree(const CEvaluationTree &src, const CDataContainer *pParent)	CEvaluationTree
CFunction(const CFunction &src)	CFunction	protected
CFunction(const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT, const Type &type=Function)	CFunction
CFunction(const CFunction &src, const CDataContainer *pParent)	CFunction
clearNodes()	CEvaluationTree	protected
CMassAction(const CMassAction &src)	CMassAction	protected
CMassAction(const std::string &name="NoName", const CDataContainer *pParent=NO_PARENT)	CMassAction
CMassAction(const CFunction &src, const CDataContainer *pParent)	CMassAction
CMassAction(const TriLogic &reversible, const CDataContainer *pParent=NO_PARENT)	CMassAction
CObjectInterface()	CObjectInterface
CObjectInterface(const CObjectInterface &src)	CObjectInterface
compile()	CMassAction	virtual
compileNodes()	CEvaluationTree	protected
completeFunctionList(std::vector< const CFunction * > &list, const size_t &added=0)	CFunction	static
Container enum value	CDataObject
Container2Info	CAnnotation	privatestatic
ContainerList typedef	CObjectInterface
containsCN(const DataObjectSet &elements) const	CEvaluationTree
copy(const CEvaluationTree &src)	CEvaluationTree	static
create(CEvaluationTree::Type type)	CEvaluationTree	static
createCopy() const	CFunction
createListOfParametersForMathML(std::vector< std::vector< std::string > > &env)	CFunction
createUndoData(CUndoData &undoData, const CUndoData::Type &type, const CData &oldData=CData(), const CCore::Framework &framework=CCore::Framework::ParticleNumbers) const	CFunction	virtual
CUndoObjectInterface()	CUndoObjectInterface
CUndoObjectInterface(const CUndoObjectInterface &src)	CUndoObjectInterface
DataModel enum value	CDataObject
DataObject(const CObjectInterface *pInterface)	CObjectInterface	static
DataObjectSet typedef	CDataObject
destruct() override	CDataObject	virtual
DisplayName enum value	CDataObject
EmptyList	CDataContainer	static
Expression enum value	CEvaluationTree
Flag enum name	CDataObject
freeMiriamInfo(CDataContainer *pParent)	CAnnotation	static
fromAST(const ASTNode *pASTNode, bool isFunction)	CEvaluationTree	static
fromData(const CData &data, CUndoObjectInterface *pParent)	CFunction	static
Function enum value	CEvaluationTree
generateUuid()	CUndoObjectInterface
getChildObjectUnits(const CDataObject *pObject) const	CDataContainer	virtual
getCN() const override	CDataObject	virtual
getDataObject() const override	CDataObject	virtual
getDescendants(CDataObject::DataObjectSet &descendants, const bool &recursive=false) const	CDataContainer
getErrorPosition() const	CEvaluationTree
getIndex(const CDataObject *pObject) const	CDataContainer	virtual
getInfix() const	CEvaluationTree
getKey() const	CFunction	virtual
getMiriamAnnotation() const	CAnnotation
getNodeList() const	CEvaluationTree
getNodeObject(const CCommonName &CN) const	CEvaluationTree	virtual
getNotes() const	CAnnotation
getObject(const CCommonName &cn) const override	CDataContainer	virtual
getObjectAncestor(const std::string &type) const	CDataObject
getObjectDataModel() const	CDataObject
getObjectDisplayName() const override	CDataObject	virtual
GetObjectFromCN(const ContainerList &listOfContainer, const CCommonName &objName)	CObjectInterface	static
getObjectFromCN(const CCommonName &cn) const	CDataObject
getObjectName() const	CDataObject
getObjectParent() const	CDataObject
getObjects() const	CDataContainer	virtual
getObjects()	CDataContainer	virtual
getObjectType() const	CDataObject
getPrerequisites() const override	CDataObject	virtual
getRoot()	CEvaluationTree
getRoot() const	CEvaluationTree
getSBMLId() const	CFunction
getType() const	CEvaluationTree
getUnits() const override	CDataContainer	virtual
getUnsupportedAnnotations()	CAnnotation
getUnsupportedAnnotations() const	CAnnotation
getUuid() const	CUndoObjectInterface
getValidity() const override	CDataObject	virtual
getValueObject() const override	CDataContainer	virtual
getValuePointer() const override	CDataObject	virtual
getVariableIndex(const std::string &name) const	CFunction	virtual
getVariables()	CFunction
getVariables() const	CFunction
getVariableValue(const size_t &index) const	CFunction	virtual
Gui enum value	CDataObject
hasCircularDependency() const	CEvaluationTree
hasDiscontinuity() const	CEvaluationTree
hasFlag(const Flag &flag) const	CDataObject
Infix	CMassAction	static
initMiriamAnnotation(const std::string &newId)	CAnnotation
initObjects()	CEvaluationTree	private
initVariables()	CFunction	protected
insert(const CData &data) override	CDataContainer	virtual
isBoolean() const	CEvaluationTree
isPrerequisiteForContext(const CObjectInterface *pObject, const CCore::SimulationContextFlag &context, const CObjectInterface::ObjectSet &changedObjects) const override	CDataObject	virtual
isReadOnly() const	CFunction	virtual
isReversible() const	CFunction
isSuitable(const size_t noSubstrates, const size_t noProducts, const TriLogic reversible)	CFunction
isValidXML(const std::string &xml)	CAnnotation	privatestatic
load(CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH)	CFunction	virtual
mAggregateValidity	CDataObject	private
mapObjectNodes(const CDataContainer *pSrc, const CDataContainer *pTarget)	CEvaluationTree
MassAction enum value	CEvaluationTree
MathExpression enum value	CEvaluationTree
Matrix enum value	CDataObject
mCalculationSequence	CEvaluationTree	protected
mCallParametersBegin	CFunction	private
mErrorPosition	CEvaluationTree	private
mInfix	CEvaluationTree	protected
mKey	CAnnotation	protected
mMiriamAnnotation	CAnnotation	private
mNotes	CAnnotation	private
mObjectDisplayName	CDataObject	mutableprivate
mObjectFlag	CDataObject	private
mObjectName	CDataObject	private
mObjects	CDataContainer	protected
mObjectType	CDataObject	private
ModelEntity enum value	CDataObject
mpNodeList	CEvaluationTree	protected
mpObjectDisplayName	CDataObject	mutableprivate
mpObjectName	CDataObject	mutableprivate
mpObjectParent	CDataObject	private
mPrerequisits	CDataObject	protected
mpRootNode	CEvaluationTree	private
mpRootValue	CEvaluationTree	protected
mpUuid	CUndoObjectInterface	private
mReferencedValidities	CDataObject	private
mReferences	CDataObject	protected
mReversible	CFunction	private
mSBMLId	CFunction	private
mType	CEvaluationTree	protected
mUnsupportedAnnotations	CAnnotation	private
mUuidLocked	CUndoObjectInterface	private
mValidity	CObjectInterface	mutableprotected
mValue	CEvaluationTree	protected
mVariables	CFunction	private
mXMLId	CAnnotation	private
NameVector enum value	CDataObject
NonUniqueName enum value	CDataObject
objectMap typedef	CDataContainer
objectRenamed(CDataObject *pObject, const std::string &oldName)	CDataContainer
ObjectSet typedef	CObjectInterface
operator==(const CFunction &rhs) const	CFunction
CEvaluationTree::operator==(const CEvaluationTree &rhs) const	CEvaluationTree
CAnnotation::operator==(const CAnnotation &rhs) const	CAnnotation
parse()	CEvaluationTree	protected
PreDefined enum value	CEvaluationTree
prerequisitsContains(const DataObjectSet &objects) const	CDataObject
print(std::ostream *ostream) const override	CDataObject	virtual
Reference enum value	CDataObject
refreshAggregateValidity()	CDataObject	private
remove(CDataObject *pObject)	CDataContainer	virtual
removeIssue(const CIssue &issue)	CDataObject
removeReference(const CDataContainer *pReference)	CDataObject
removeUnsupportedAnnotation(const std::string &name)	CAnnotation
replaceUnsupportedAnnotation(const std::string &name, const std::string &xml)	CAnnotation
Root enum value	CDataObject
sanitizeObjectName(std::string &name)	CDataObject	static
Separator enum value	CDataObject
setInfix(const std::string &infix)	CMassAction	virtual
setMiriamAnnotation(const std::string &miriamAnnotation, const std::string &newId, const std::string &oldId)	CAnnotation
setNotes(const std::string &notes)	CAnnotation
setObjectName(const std::string &name)	CDataObject
setObjectParent(const CDataContainer *pParent)	CDataObject	virtual
setReversible(const TriLogic &reversible)	CFunction
setRoot(CEvaluationNode *pRootNode)	CEvaluationTree	virtual
setSBMLId(const std::string &id)	CFunction
setTree(const ASTNode &pRootNode, bool isFunction)	CEvaluationTree
setType(const CEvaluationTree::Type &type)	CEvaluationTree	protected
setUuid(const xg::Guid &uuid)	CUndoObjectInterface
setUuid(const std::string &uuid)	CUndoObjectInterface
size() const	CEvaluationTree
splitFunction(const CEvaluationNode *node, const std::string &name1, const std::string &name2) const	CFunction
StaticString enum value	CDataObject
toAST(const CDataModel *pDataModel) const	CEvaluationTree	virtual
toData() const	CFunction	virtual
Type enum name	CEvaluationTree
TypeName	CEvaluationTree	static
UnsupportedAnnotation typedef	CAnnotation
updateIndex(const size_t &index, const CUndoObjectInterface *pUndoObject)	CUndoObjectInterface	virtual
updateTree()	CEvaluationTree
UserDefined enum value	CEvaluationTree
validityChanged(const CValidity &changedValidity) override	CDataObject	virtual
validityRemoved(const CValidity &changedValidity)	CDataObject
ValueBool enum value	CDataObject
ValueDbl enum value	CDataObject
ValueInt enum value	CDataObject
ValueInt64 enum value	CDataObject
ValueString enum value	CDataObject
Vector enum value	CDataObject
writeMathML(const std::vector< std::vector< std::string > > &variables, bool expand=true, bool fullExpand=true) const	CMassAction	virtual
CFunction::writeMathML(std::ostream &out, size_t l=0) const	CFunction	virtual
XMLType	CEvaluationTree	static
~CAnnotation()	CAnnotation	virtual
~CDataContainer()	CDataContainer	virtual
~CDataObject()	CDataObject	virtual
~CEvaluationTree()	CEvaluationTree	virtual
~CFunction()	CFunction	virtual
~CMassAction()	CMassAction
~CObjectInterface()	CObjectInterface	virtual
~CUndoObjectInterface()	CUndoObjectInterface	virtual