test000062 Class Reference

#include <test000062.h>

Inheritance diagram for test000062:

Collaboration diagram for test000062:

Public Member Functions
void	setUp ()
void	tearDown ()
void	test_kineticlaw_without_math ()

Static Protected Attributes
static const char *	MODEL_STRING1
static CCopasiDataModel *	pCOPASIDATAMODEL = NULL

Private Member Functions
	CPPUNIT_TEST (test_kineticlaw_without_math)
	CPPUNIT_TEST_SUITE (test000062)
	CPPUNIT_TEST_SUITE_END ()

Detailed Description

This test check if a kinetic law without math element is imported with the correct warning.

Definition at line 30 of file test000062.h.

Member Function Documentation

test000062::CPPUNIT_TEST ( test_kineticlaw_without_math  )

private

test000062::CPPUNIT_TEST_SUITE ( test000062  )

private

test000062::CPPUNIT_TEST_SUITE_END ( )

private

void test000062::setUp

(

)

Definition at line 39 of file test000062.cpp.

References CCopasiRootContainer::addDatamodel(), CCopasiRootContainer::init(), and pCOPASIDATAMODEL.

{
  // Create the root container.
  CCopasiRootContainer::init(0, NULL, false);
  // Create the global data model.
  pCOPASIDATAMODEL = CCopasiRootContainer::addDatamodel();
}

void test000062::tearDown

(

)

Definition at line 47 of file test000062.cpp.

References CCopasiRootContainer::destroy().

{
  CCopasiRootContainer::destroy();
}

void test000062::test_kineticlaw_without_math

(

)

Definition at line 52 of file test000062.cpp.

References CCopasiMessage::getLastMessage(), CCopasiDataModel::getModel(), CCopasiMessage::getNumber(), CCopasiMessage::getType(), CCopasiRootContainer::getUndefinedFunction(), CCopasiDataModel::importSBMLFromString(), MCSBML, MODEL_STRING1, pCOPASIDATAMODEL, CCopasiMessage::size(), and CCopasiMessage::WARNING.

{
  CCopasiDataModel* pDataModel = pCOPASIDATAMODEL;
  CPPUNIT_ASSERT(pDataModel->importSBMLFromString(test000062::MODEL_STRING1));
  CModel* pModel = pDataModel->getModel();
  CPPUNIT_ASSERT(pModel != NULL);
  CPPUNIT_ASSERT(pModel->getCompartments().size() == 1);
  CPPUNIT_ASSERT(pModel->getMetabolites().size() == 2);
  CPPUNIT_ASSERT(pModel->getReactions().size() == 1);
  CPPUNIT_ASSERT(pModel->getModelValues().size() == 0);
  // check if the reactions function is set correctly
  CReaction* pReaction = pModel->getReactions()[0];
  CPPUNIT_ASSERT(pReaction->getFunction() == CCopasiRootContainer::getUndefinedFunction());
  // check if the correct error message has been created
#if LIBSBML_VERSION >= 40200
  // recent libsbml versions will complain about missing math element!
  CPPUNIT_ASSERT(CCopasiMessage::size() == 2);
#else
  CPPUNIT_ASSERT(CCopasiMessage::size() == 1);
#endif
  const CCopasiMessage& message = CCopasiMessage::getLastMessage();
  CPPUNIT_ASSERT(message.getType() == CCopasiMessage::WARNING);
  CPPUNIT_ASSERT(message.getNumber() == MCSBML + 56);
}

Member Data Documentation

const char * test000062::MODEL_STRING1

staticprotected

The units given for the two parameters in the kinetic law are wrong and they are only there to stop libsbml from issuing warnings about best modeling practice.

Definition at line 37 of file test000062.h.

Referenced by test_kineticlaw_without_math().

CCopasiDataModel * test000062::pCOPASIDATAMODEL = NULL

staticprotected

Definition at line 38 of file test000062.h.

Referenced by setUp(), and test_kineticlaw_without_math().

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The documentation for this class was generated from the following files:

• test000062.h
• test000062.cpp