CQEFMSpeciesDM Class Reference

#include <CQEFMSpeciesDM.h>

Inheritance diagram for CQEFMSpeciesDM:

Collaboration diagram for CQEFMSpeciesDM:

Public Member Functions
virtual int	columnCount (const QModelIndex &parent=QModelIndex()) const
	CQEFMSpeciesDM (QObject *parent=0)
virtual QVariant	data (const QModelIndex &index, int role=Qt::DisplayRole) const
virtual Qt::ItemFlags	flags (const QModelIndex &index) const
virtual QVariant	headerData (int section, Qt::Orientation orientation, int role=Qt::DisplayRole) const
virtual bool	isDefaultRow (const QModelIndex &i) const
virtual int	rowCount (const QModelIndex &parent=QModelIndex()) const
virtual bool	setData (const QModelIndex &index, const QVariant &value, int role=Qt::EditRole)
void	setTask (const CEFMTask *pTask)
Public Member Functions inherited from CQBaseDataModel
virtual bool	clear ()
	CQBaseDataModel (QObject *parent=0)
QString	createNewName (const QString name, const int nameCol)
bool	insertRow ()
bool	removeRow (int position)

Protected Member Functions
virtual bool	insertRows (int position, int rows, const QModelIndex &index=QModelIndex())
virtual bool	removeRows (int position, int rows, const QModelIndex &index=QModelIndex())

Private Attributes
std::vector< CFluxMode > ::const_iterator	mBeginModes
std::vector< CMetab * > ::const_iterator	mBeginSpecies
size_t	mModesSize
const CModel *	mpModel
const CEFMTask *	mpTask
size_t	mSpeciesSize

Additional Inherited Members
Signals inherited from CQBaseDataModel
void	notifyGUI (ListViews::ObjectType objectType, ListViews::Action action, const std::string &key="")

Detailed Description

Definition at line 31 of file CQEFMSpeciesDM.h.

Constructor & Destructor Documentation

CQEFMSpeciesDM::CQEFMSpeciesDM

(

QObject *

parent = 0

)

Definition at line 29 of file CQEFMSpeciesDM.cpp.

                                             :
    CQBaseDataModel(parent),
    mpTask(NULL),
    mBeginModes(),
    mModesSize(0),
    mpModel(NULL),
    mBeginSpecies(),
    mSpeciesSize(0)
{}

Member Function Documentation

int CQEFMSpeciesDM::columnCount ( const QModelIndex &  parent = QModelIndex() ) const

virtual

Definition at line 47 of file CQEFMSpeciesDM.cpp.

References mpTask, and mSpeciesSize.

{
  if (mpTask == NULL)
    return 0;

  return (int)(mSpeciesSize + 1);  // For flux mode number
}

QVariant CQEFMSpeciesDM::data ( const QModelIndex &  index, int  role = Qt::DisplayRole  ) const

virtual

Implements CQBaseDataModel.

Definition at line 63 of file CQEFMSpeciesDM.cpp.

References COL_ROW_NUMBER, CEFMTask::getSpeciesChanges(), mBeginModes, mBeginSpecies, mpTask, and rowCount().

{
  if (!index.isValid())
    return QVariant();

  if (index.row() >= rowCount())
    return QVariant();

  if (role == Qt::DisplayRole || role == Qt::EditRole)
    {
      //std::vector< CFluxMode >::const_iterator itMode = mBeginModes + index.row();

      switch (index.column())
        {
          case COL_ROW_NUMBER:
            return QVariant(index.row() + 1);
            break;

          default:
          {
            std::pair< C_FLOAT64, C_FLOAT64 > Changes =
              mpTask->getSpeciesChanges(*(mBeginModes + index.row()), **(mBeginSpecies + index.column() - 1));

            if (Changes.first > 100.0 * std::numeric_limits< C_FLOAT64 >::epsilon() ||
                Changes.second > 100.0 * std::numeric_limits< C_FLOAT64 >::epsilon())
              {
                return QVariant(QString("-" + QString::number(Changes.first) + " | +" + QString::number(Changes.second)));
              }

            return QVariant();
          }
        }
    }

  return QVariant();
}

Qt::ItemFlags CQEFMSpeciesDM::flags ( const QModelIndex &  index ) const

virtual

Reimplemented from CQBaseDataModel.

Definition at line 55 of file CQEFMSpeciesDM.cpp.

{
  if (!index.isValid())
    return Qt::ItemIsEnabled;

  return QAbstractItemModel::flags(index) & ~Qt::ItemIsEditable;
}

QVariant CQEFMSpeciesDM::headerData ( int  section, Qt::Orientation  orientation, int  role = Qt::DisplayRole  ) const

virtual

Implements CQBaseDataModel.

Definition at line 100 of file CQEFMSpeciesDM.cpp.

References COL_ROW_NUMBER, FROM_UTF8, CMetabNameInterface::getDisplayName(), mBeginSpecies, and mpModel.

{
  if (role != Qt::DisplayRole)
    return QVariant();

  if (orientation == Qt::Horizontal)
    {
      switch (section)
        {
          case COL_ROW_NUMBER:
            return QVariant(QString("#"));
            break;

          default:
            return QVariant(QString(FROM_UTF8(CMetabNameInterface::getDisplayName(mpModel, **(mBeginSpecies + section - 1), false))));
            break;
        }
    }

  return QString("%1").arg(section + 1);
}

bool CQEFMSpeciesDM::insertRows ( int  position, int  rows, const QModelIndex &  index = QModelIndex()  )

protectedvirtual

Implements CQBaseDataModel.

Definition at line 158 of file CQEFMSpeciesDM.cpp.

{
  return false;
}

bool CQEFMSpeciesDM::isDefaultRow ( const QModelIndex &  i ) const

virtual

Reimplemented from CQBaseDataModel.

Definition at line 170 of file CQEFMSpeciesDM.cpp.

{
  return false;
}

bool CQEFMSpeciesDM::removeRows ( int  position, int  rows, const QModelIndex &  index = QModelIndex()  )

protectedvirtual

Implements CQBaseDataModel.

Definition at line 164 of file CQEFMSpeciesDM.cpp.

{
  return false;
}

int CQEFMSpeciesDM::rowCount ( const QModelIndex &  parent = QModelIndex() ) const

virtual

Definition at line 39 of file CQEFMSpeciesDM.cpp.

References mModesSize, and mpTask.

Referenced by data().

{
  if (mpTask == NULL)
    return 0;

  return (int) mModesSize;
}

bool CQEFMSpeciesDM::setData ( const QModelIndex &  index, const QVariant &  value, int  role = Qt::EditRole  )

virtual

Implements CQBaseDataModel.

Definition at line 152 of file CQEFMSpeciesDM.cpp.

{
  return false;
}

void CQEFMSpeciesDM::setTask

(

const CEFMTask *

pTask

)

Definition at line 123 of file CQEFMSpeciesDM.cpp.

References CCopasiVector< T >::begin(), CEFMTask::getFluxModes(), CModel::getMetabolites(), CCopasiProblem::getModel(), CCopasiTask::getProblem(), mBeginModes, mBeginSpecies, mModesSize, mpModel, mpTask, mSpeciesSize, pTask, and CCopasiVector< T >::size().

Referenced by CQEFMResultWidget::loadResult().

{
  mpTask = pTask;

  if (mpTask != NULL)
    {
      mBeginModes = mpTask->getFluxModes().begin();
      mModesSize = mpTask->getFluxModes().size();

      mpModel = mpTask->getProblem()->getModel();

      if (mpModel != NULL)
        {
          mBeginSpecies = mpModel->getMetabolites().begin();
          mSpeciesSize = mpModel->getMetabolites().size();
        }
      else
        {
          mSpeciesSize = 0;
        }
    }
  else
    {
      mModesSize = 0;
      mpModel = NULL;
      mSpeciesSize = 0;
    }
}

Member Data Documentation

std::vector< CFluxMode >::const_iterator CQEFMSpeciesDM::mBeginModes

private

Definition at line 60 of file CQEFMSpeciesDM.h.

Referenced by data(), and setTask().

std::vector< CMetab * >::const_iterator CQEFMSpeciesDM::mBeginSpecies

private

Definition at line 64 of file CQEFMSpeciesDM.h.

Referenced by data(), headerData(), and setTask().

size_t CQEFMSpeciesDM::mModesSize

private

Definition at line 61 of file CQEFMSpeciesDM.h.

Referenced by rowCount(), and setTask().

const CModel* CQEFMSpeciesDM::mpModel

private

Definition at line 63 of file CQEFMSpeciesDM.h.

Referenced by headerData(), and setTask().

const CEFMTask* CQEFMSpeciesDM::mpTask

private

Definition at line 58 of file CQEFMSpeciesDM.h.

Referenced by columnCount(), data(), rowCount(), and setTask().

size_t CQEFMSpeciesDM::mSpeciesSize

private

Definition at line 65 of file CQEFMSpeciesDM.h.

Referenced by columnCount(), and setTask().

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The documentation for this class was generated from the following files:

• CQEFMSpeciesDM.h
• CQEFMSpeciesDM.cpp