CPlotSpecification.cpp

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/* Begin CVS Header
   $Source: /Volumes/Home/Users/shoops/cvs/copasi_dev/copasi/plot/CPlotSpecification.cpp,v $
   $Revision: 1.17 $
   $Name:  $
   $Author: shoops $
   $Date: 2011/03/14 19:20:01 $
   End CVS Header */

// Copyright (C) 2011 - 2010 by Pedro Mendes, Virginia Tech Intellectual
// Properties, Inc., University of Heidelberg, and The University
// of Manchester.
// All rights reserved.

// Copyright (C) 2008 by Pedro Mendes, Virginia Tech Intellectual
// Properties, Inc., EML Research, gGmbH, University of Heidelberg,
// and The University of Manchester.
// All rights reserved.

// Copyright (C) 2001 - 2007 by Pedro Mendes, Virginia Tech Intellectual
// Properties, Inc. and EML Research, gGmbH.
// All rights reserved.

#include "model/CModel.h"

#include "CPlotSpecification.h"
#include "report/CCopasiObjectReference.h"

CPlotSpecification::CPlotSpecification(const std::string & name,
                                       const CCopasiContainer * pParent,
                                       const CPlotSpecification::Type & type):
    CPlotItem(name, pParent, type),
    items("Curves", this),
    mActive(true)
{initObjects();}

CPlotSpecification::CPlotSpecification(const CPlotSpecification & src,
                                       const CCopasiContainer * pParent):
    CPlotItem(src, pParent),
    items(src.getItems(), this),
    mActive(src.mActive)
{initObjects();}

CPlotSpecification::~CPlotSpecification() {}

void CPlotSpecification::cleanup()
{
  items.cleanup();
  this->CPlotItem::cleanup();
}

void CPlotSpecification::initObjects()
{
  //  CCopasiContainer::addObjectReference("Active", mActive, CCopasiObject::ValueBool);
}

//*************************************

void CPlotSpecification::setActive(const bool & active)
{mActive = active;}

const bool & CPlotSpecification::isActive() const
{return mActive;}

bool CPlotSpecification::isLogX() const
{
  return *getValue("log X").pBOOL;
}

bool CPlotSpecification::isLogY() const
{
  return *getValue("log Y").pBOOL;
}

void CPlotSpecification::setLogX(bool l)
{
  setValue("log X", l);
}

void CPlotSpecification::setLogY(bool l)
{
  setValue("log Y", l);
}

//*************************************

CPlotItem* CPlotSpecification::createItem(const std::string & name, CPlotItem::Type type)
{
  CPlotItem * itm = new CPlotItem(name, NULL, type);

  if (!items.add(itm, true))
    {
      delete itm;
      return NULL;
    }

  return itm;
}

bool CPlotSpecification::createDefaultPlot(const CModel* model)
{
  mActive = true;

  //TODO cleanup before?
  //title = "Default Data Plot 2D";

  CPlotItem * plItem;
  std::string itemTitle;
  CPlotDataChannelSpec name2;
  const CCopasiObject * tmp;

  CPlotDataChannelSpec name1 = model->getValueReference()->getCN();

  size_t i, imax = model->getMetabolites().size();

  for (i = 0; i < imax; ++i)
    {
      tmp = model->getMetabolites()[i]->getConcentrationReference();
      name2 = tmp->getCN();
      itemTitle = tmp->getObjectDisplayName();

      plItem = this->createItem(itemTitle, CPlotItem::curve2d);
      plItem->addChannel(name1);
      plItem->addChannel(name2);
    }

  return true; //TODO: really check;
}