CCopasiXMLParser::COPASIElement Class Reference

Inheritance diagram for CCopasiXMLParser::COPASIElement:

Collaboration diagram for CCopasiXMLParser::COPASIElement:

Public Member Functions
	COPASIElement (CCopasiXMLParser &parser, SCopasiXMLParserCommon &common)
virtual void	end (const XML_Char *pszName)
virtual void	start (const XML_Char *pszName, const XML_Char **papszAttrs)
virtual	~COPASIElement ()
Public Member Functions inherited from CXMLElementHandler< CCopasiXMLParser, SCopasiXMLParserCommon >
	CXMLElementHandler (CCopasiXMLParser &parser, SCopasiXMLParserCommon &common)
virtual void	end (const XML_Char *C_UNUSED(pszName))
virtual void	reset ()
virtual void	start (const XML_Char *C_UNUSED(pszName), const XML_Char **C_UNUSED(papszAttrs))
virtual	~CXMLElementHandler ()

Private Types
enum	Element {   COPASI = 0, ListOfFunctions, Model, ListOfTasks,   ListOfReports, ListOfPlots, GUI, ListOfLayouts,   SBMLReference }

Additional Inherited Members
Protected Member Functions inherited from CXMLElementHandler< CCopasiXMLParser, SCopasiXMLParserCommon >
void	addFix (const std::string &key, CCopasiObject *pObject)
void	deleteCurrentHandler ()
Protected Attributes inherited from CXMLElementHandler< CCopasiXMLParser, SCopasiXMLParserCommon >
SCopasiXMLParserCommon &	mCommon
C_INT32	mCurrentElement
C_INT32	mLastKnownElement
CCopasiXMLParser &	mParser
CXMLElementHandler *	mpCurrentHandler

Detailed Description

Definition at line 2812 of file CCopasiXMLParser.h.

Member Enumeration Documentation

enum CCopasiXMLParser::COPASIElement::Element

private

Enumerator
COPASI
ListOfFunctions
Model
ListOfTasks
ListOfReports
ListOfPlots
GUI
ListOfLayouts
SBMLReference

Definition at line 2819 of file CCopasiXMLParser.h.

    {
      COPASI = 0,
      ListOfFunctions,
      Model,
      ListOfTasks,
      ListOfReports,
      ListOfPlots,
      GUI,
      ListOfLayouts,
      SBMLReference
    };

Constructor & Destructor Documentation

CCopasiXMLParser::COPASIElement::COPASIElement	(	CCopasiXMLParser &	parser,
		SCopasiXMLParserCommon &	common
	)

Constructor

Definition at line 464 of file CCopasiXMLParser.cpp.

                                    :
  CXMLElementHandler< CCopasiXMLParser, SCopasiXMLParserCommon >(parser, common)
{}

CCopasiXMLParser::COPASIElement::~COPASIElement ( )

virtual

Destructor

Definition at line 469 of file CCopasiXMLParser.cpp.

{deleteCurrentHandler();}

Member Function Documentation

void CCopasiXMLParser::COPASIElement::end ( const XML_Char *  pszName )

virtual

End element handler

Parameters

const

XML_Char *pszName

Definition at line 592 of file CCopasiXMLParser.cpp.

References C_INVALID_INDEX, CKeyFactory::get(), CCopasiVectorN< CType >::getIndex(), CCopasiObject::getKey(), CCopasiRootContainer::getKeyFactory(), CCopasiMessage::getLastMessage(), CCopasiParameter::getType(), CCopasiParameter::getValue(), CCopasiParameter::KEY, SCopasiXMLParserCommon::KeyMap, CCopasiXMLParser::mCommon, SCopasiXMLParserCommon::pFunctionList, SCopasiXMLParserCommon::pGUI, CCopasiParameter::Value::pKEY, CCopasiVectorN< CType >::remove(), CCopasiParameter::setValue(), START_ELEMENT, and SCopasiXMLParserCommon::UnmappedKeyParameters.

{
  if (!strcmp(pszName, "COPASI"))
    {
      mCurrentElement = START_ELEMENT;

      // We need to handle the unmapped parameters of type key.
      std::vector< std::string >::iterator it = mCommon.UnmappedKeyParameters.begin();
      std::vector< std::string >::iterator end = mCommon.UnmappedKeyParameters.end();

      for (; it != end; ++it)
        {
          CCopasiParameter * pParameter =
            dynamic_cast< CCopasiParameter * >(CCopasiRootContainer::getKeyFactory()->get(*it));

          if (pParameter != NULL &&
              pParameter->getType() == CCopasiParameter::KEY)
            {
              CCopasiObject * pObject =
                mCommon.KeyMap.get(*pParameter->getValue().pKEY);

              if (pObject != NULL)
                pParameter->setValue(pObject->getKey());
              else
                pParameter->setValue(std::string(""));
            }
        }

      // We need to remove the no longer needed expression "Objective Function" from the function list.
      if (mCommon.pFunctionList != NULL &&
          mCommon.pFunctionList->getIndex("Objective Function") != C_INVALID_INDEX)
        {
          mCommon.pFunctionList->remove("Objective Function");
        }

      return;
    }

  if (!strcmp(pszName, "ParameterGroup"))
    {
      mCurrentElement = START_ELEMENT;
    }
  else if (!strcmp(pszName, "GUI") && mCommon.pGUI == NULL)
    {
      CCopasiMessage::getLastMessage();
    }

  deleteCurrentHandler();

  //TODO why no case statement with error checking (like in other elements)?

  return;
}

void CCopasiXMLParser::COPASIElement::start ( const XML_Char *  pszName, const XML_Char **  papszAttrs  )

virtual

Start element handler

Parameters

const	XML_Char *pszName
const	XML_Char **papszAttrs

Definition at line 471 of file CCopasiXMLParser.cpp.

References C_INT32, CCopasiXMLParser::mCommon, MCXML, CExpatTemplate< CExpat >::mParser, SCopasiXMLParserCommon::pGUI, SCopasiXMLParserCommon::pVersion, CVersion::setVersion(), strToInt(), and CCopasiMessage::WARNING.

{
  mCurrentElement++; /* We should always be on the next element */
  mpCurrentHandler = NULL;

  const char * versionMajor;
  C_INT32 VersionMajor;
  const char * versionMinor;
  C_INT32 VersionMinor;
  const char * versionDevel;
  C_INT32 VersionDevel;
  bool CopasiSourcesModified = true;

  switch (mCurrentElement)
    {
      case COPASI:

        if (!strcmp(pszName, "COPASI"))
          {
            versionMajor = mParser.getAttributeValue("versionMajor", papszAttrs, "0");
            VersionMajor = strToInt(versionMajor);
            versionMinor = mParser.getAttributeValue("versionMinor", papszAttrs, "0");
            VersionMinor = strToInt(versionMinor);
            versionDevel = mParser.getAttributeValue("versionDevel", papszAttrs, "0");
            VersionDevel = strToInt(versionDevel);
            CopasiSourcesModified = mParser.toBool(mParser.getAttributeValue("copasiSourcesModified", papszAttrs, "true"));

            mCommon.pVersion->setVersion(VersionMajor, VersionMinor, VersionDevel, CopasiSourcesModified);

            return;
          }
        // We may have a configuration file which starts with a parameter group
        else if (!strcmp(pszName, "ParameterGroup"))
          {
            mpCurrentHandler = new ParameterGroupElement(mParser, mCommon);
          }
        else
          {
            mpCurrentHandler = &mParser.mUnknownElement;

            CCopasiMessage(CCopasiMessage::WARNING, MCXML + 10,
                           pszName, "COPASI", mParser.getCurrentLineNumber());
          }

        break;

      case ListOfFunctions:

        if (!strcmp(pszName, "ListOfFunctions"))
          mpCurrentHandler = new ListOfFunctionsElement(mParser, mCommon);

        break;

      case Model:

        if (!strcmp(pszName, "Model"))
          mpCurrentHandler = new ModelElement(mParser, mCommon);

        break;

      case ListOfTasks:

        if (!strcmp(pszName, "ListOfTasks"))
          mpCurrentHandler = new ListOfTasksElement(mParser, mCommon);

        break;

      case ListOfReports:

        if (!strcmp(pszName, "ListOfReports"))
          mpCurrentHandler = new ListOfReportsElement(mParser, mCommon);

        break;

      case ListOfPlots:

        if (!strcmp(pszName, "ListOfPlots"))
          mpCurrentHandler = new ListOfPlotsElement(mParser, mCommon);

        break;

      case GUI:

        if (!strcmp(pszName, "GUI"))
          {
            if (mCommon.pGUI)
              mpCurrentHandler = new GUIElement(mParser, mCommon);
            else
              mpCurrentHandler = &mParser.mUnknownElement;
          }

        break;

      case ListOfLayouts:

        if (!strcmp(pszName, "ListOfLayouts"))
          mpCurrentHandler = new ListOfLayoutsElement(mParser, mCommon);

        break;

      case SBMLReference:

        if (!strcmp(pszName, "SBMLReference"))
          mpCurrentHandler = new SBMLReferenceElement(mParser, mCommon);

        break;

      default:
        mpCurrentHandler = &mParser.mUnknownElement;
        break;
    }

  if (mpCurrentHandler)
    mParser.pushElementHandler(mpCurrentHandler);

  mParser.onStartElement(pszName, papszAttrs);

  return;
}

---

The documentation for this class was generated from the following files:

• CCopasiXMLParser.h
• CCopasiXMLParser.cpp