test000080 Class Reference

#include <test000080.h>

Inheritance diagram for test000080:

Collaboration diagram for test000080:

Public Member Functions
void	setUp ()
void	tearDown ()
void	test_mass_action_recognition_bug ()

Static Protected Attributes
static const char *	MODEL_STRING1
static CCopasiDataModel *	pCOPASIDATAMODEL = NULL

Private Member Functions
	CPPUNIT_TEST (test_mass_action_recognition_bug)
	CPPUNIT_TEST_SUITE (test000080)
	CPPUNIT_TEST_SUITE_END ()

Detailed Description

Definition at line 24 of file test000080.h.

Member Function Documentation

test000080::CPPUNIT_TEST ( test_mass_action_recognition_bug  )

private

test000080::CPPUNIT_TEST_SUITE ( test000080  )

private

test000080::CPPUNIT_TEST_SUITE_END ( )

private

void test000080::setUp

(

)

Definition at line 35 of file test000080.cpp.

References CCopasiRootContainer::addDatamodel(), CCopasiRootContainer::init(), and pCOPASIDATAMODEL.

{
  // Create the root container.
  CCopasiRootContainer::init(0, NULL, false);
  // Create the global data model.
  pCOPASIDATAMODEL = CCopasiRootContainer::addDatamodel();
}

void test000080::tearDown

(

)

Definition at line 43 of file test000080.cpp.

References CCopasiRootContainer::destroy().

{
  CCopasiRootContainer::destroy();
}

void test000080::test_mass_action_recognition_bug

(

)

Definition at line 48 of file test000080.cpp.

References CCopasiDataModel::getModel(), CModel::getReactions(), CEvaluationTree::getType(), CCopasiDataModel::importSBMLFromString(), MODEL_STRING1, pCOPASIDATAMODEL, CCopasiVector< T >::size(), and CEvaluationTree::UserDefined.

{
  CCopasiDataModel* pDataModel = pCOPASIDATAMODEL;

  try
    {
      CPPUNIT_ASSERT(pDataModel->importSBMLFromString(test000080::MODEL_STRING1));
    }
  catch (...)
    {
      // there should not be an exception
      CPPUNIT_ASSERT(false);
    }

  const CModel* pModel = pDataModel->getModel();

  CPPUNIT_ASSERT(pModel != NULL);

  CPPUNIT_ASSERT(pModel->getReactions().size() == 1);

  const CReaction* pReaction = pModel->getReactions()[0];

  CPPUNIT_ASSERT(pReaction != NULL);

  const CFunction* pFun = pReaction->getFunction();

  CPPUNIT_ASSERT(pFun != NULL);

  CPPUNIT_ASSERT(pFun->getType() == CEvaluationTree::UserDefined);
}

Member Data Documentation

const char * test000080::MODEL_STRING1

staticprotected

Definition at line 34 of file test000080.h.

Referenced by test_mass_action_recognition_bug().

CCopasiDataModel * test000080::pCOPASIDATAMODEL = NULL

staticprotected

This is a test for a bug where some kinetics were wrongly recognized as mass action. This kind of kinetic is used in the sbml testsuite in test 65, 121, 250, 253, 256 and 600.

Definition at line 33 of file test000080.h.

Referenced by setUp(), and test_mass_action_recognition_bug().

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The documentation for this class was generated from the following files:

• test000080.h
• test000080.cpp