COPASI API  4.16.103
Public Member Functions | Static Protected Attributes | Private Member Functions | List of all members
test000063 Class Reference

#include <test000063.h>

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Public Member Functions

void setUp ()
 
void tearDown ()
 
void test_events_1 ()
 

Static Protected Attributes

static const char * MODEL_STRING1
 
static const char * MODEL_STRING10
 
static const char * MODEL_STRING11
 
static const char * MODEL_STRING12
 
static const char * MODEL_STRING13
 
static const char * MODEL_STRING14
 
static const char * MODEL_STRING15
 
static const char * MODEL_STRING16
 
static const char * MODEL_STRING17
 
static const char * MODEL_STRING2
 
static const char * MODEL_STRING3
 
static const char * MODEL_STRING4
 
static const char * MODEL_STRING5
 
static const char * MODEL_STRING6
 
static const char * MODEL_STRING7
 
static const char * MODEL_STRING8
 
static const char * MODEL_STRING9
 
static CCopasiDataModel * pCOPASIDATAMODEL = NULL
 

Private Member Functions

 CPPUNIT_TEST (test_events_1)
 
 CPPUNIT_TEST_SUITE (test000063)
 
 CPPUNIT_TEST_SUITE_END ()
 

Detailed Description

This test check if a kinetic law without math element is imported with the correct warning.

Definition at line 30 of file test000063.h.

Member Function Documentation

test000063::CPPUNIT_TEST ( test_events_1  )
private
test000063::CPPUNIT_TEST_SUITE ( test000063  )
private
test000063::CPPUNIT_TEST_SUITE_END ( )
private
void test000063::setUp ( )

Definition at line 39 of file test000063.cpp.

References CCopasiRootContainer::addDatamodel(), CCopasiRootContainer::init(), and pCOPASIDATAMODEL.

40 {
41  // Create the root container.
42  CCopasiRootContainer::init(0, NULL, false);
43  // Create the global data model.
44  pCOPASIDATAMODEL = CCopasiRootContainer::addDatamodel();
45 }
test000063::pCOPASIDATAMODEL
static CCopasiDataModel * pCOPASIDATAMODEL
Definition: test000063.h:54
CCopasiRootContainer::addDatamodel
static CCopasiDataModel * addDatamodel()
Definition: CCopasiRootContainer.cpp:149
CCopasiRootContainer::init
static void init(int argc, char *argv[], const bool &withGui=false)
Definition: CCopasiRootContainer.cpp:78
void test000063::tearDown ( )

Definition at line 47 of file test000063.cpp.

References CCopasiRootContainer::destroy().

48 {
49  CCopasiRootContainer::destroy();
50 }
void test000063::test_events_1 ( )

Definition at line 52 of file test000063.cpp.

References CCopasiDataModel::getModel(), CCopasiDataModel::importSBMLFromString(), MODEL_STRING1, and pCOPASIDATAMODEL.

53 {
54  CCopasiDataModel* pDataModel = pCOPASIDATAMODEL;
55  CPPUNIT_ASSERT(pDataModel->importSBMLFromString(test000063::MODEL_STRING1));
56  CModel* pModel = pDataModel->getModel();
57  CPPUNIT_ASSERT(pModel != NULL);
58  CPPUNIT_ASSERT(pModel->getCompartments().size() == 1);
59  CPPUNIT_ASSERT(pModel->getMetabolites().size() == 2);
60  CPPUNIT_ASSERT(pModel->getReactions().size() == 0);
61  CPPUNIT_ASSERT(pModel->getEvents().size() == 1);
62  // run a simulation for 4 seconds and check the values of both species at 1
63  // second and at 3 seconds
64 }
test000063::pCOPASIDATAMODEL
static CCopasiDataModel * pCOPASIDATAMODEL
Definition: test000063.h:54
test000063::MODEL_STRING1
static const char * MODEL_STRING1
Definition: test000063.h:37
CCopasiDataModel::importSBMLFromString
bool importSBMLFromString(const std::string &sbmlDocumentText, CProcessReport *pImportHandler=NULL, const bool &deleteOldData=true)
Definition: CCopasiDataModel.cpp:526
CModel
Definition: CModel.h:50

Member Data Documentation

const char * test000063::MODEL_STRING1
staticprotected

Simple model with two species. One is determined by an assignment, the other is set in an event assignment.

Definition at line 37 of file test000063.h.

Referenced by test_events_1().

const char * test000063::MODEL_STRING10
staticprotected

Simple model with two species. Two events trigger at the same time. Each modifies one of the species and references the other species.

Definition at line 46 of file test000063.h.

const char * test000063::MODEL_STRING11
staticprotected

Simple model with two species. Two events. One triggers at a certain time and modifies one species. This modification triggers the second event at the same time. Although both events trigger at the same point in time, the result should be different from the model above.

Definition at line 47 of file test000063.h.

const char * test000063::MODEL_STRING12
staticprotected

Simple model with two species. One is determined by an assignment, the other is set in an event assignment. The event has a delay.

Definition at line 48 of file test000063.h.

const char * test000063::MODEL_STRING13
staticprotected

Simple model with two species. Two events trigger at the same time. Each modifies one of the species and references the other species. Both events use the same delay.

Definition at line 49 of file test000063.h.

const char * test000063::MODEL_STRING14
staticprotected

Simple model with two species. Two events. One triggers at a certain time and modifies one species. This modification triggers the second event at the same time. Although both events trigger at the same point in time, the result should be different from the model above. Both event use the same delay

Definition at line 50 of file test000063.h.

const char * test000063::MODEL_STRING15
staticprotected

Simple model with two species. Two events trigger at the same time. Each modifies one of the species and references the other species. Both events use different delays.

Definition at line 51 of file test000063.h.

const char * test000063::MODEL_STRING16
staticprotected

Simple model with two species. Two events. One triggers at a certain time and modifies one species. This modification triggers the second event at the same time. Although both events trigger at the same point in time, the result should be different from the model above. Both event use different delays.

Definition at line 52 of file test000063.h.

const char * test000063::MODEL_STRING17
staticprotected

Simple model with two species. One is determined by an ode , the other is set in an event assignment. The delay in the event has to be calculated from the trigger time.

Definition at line 53 of file test000063.h.

const char * test000063::MODEL_STRING2
staticprotected

Simple model with two species. One is determined by an ode , the other is set in an event assignment.

Definition at line 38 of file test000063.h.

const char * test000063::MODEL_STRING3
staticprotected

Simple model with two species. The compartment volume is determined by a rate rule. The second species is set by an event that is dependent on the compartment volume.

Definition at line 39 of file test000063.h.

const char * test000063::MODEL_STRING4
staticprotected

Simple model with two species and a parameter. The parameter is determined by an ode rule. The second species is set by an event that is dependent on the parameter volume.

Definition at line 40 of file test000063.h.

const char * test000063::MODEL_STRING5
staticprotected

Simple model with two species and two reactions. The second species is set by an event that is dependent on the reaction rate of the second reaction.

Definition at line 41 of file test000063.h.

const char * test000063::MODEL_STRING6
staticprotected

Simple model with two species and two reactions. The second species is set by an event that is dependent on the reaction rate of the second reaction. The second species is also set by a second time dependent event.

Definition at line 42 of file test000063.h.

const char * test000063::MODEL_STRING7
staticprotected

Simple model with two species. One species is determined by a rate rule, the other is set by an event that is determined by the first species. The assignment expression references the species itself.

Definition at line 43 of file test000063.h.

const char * test000063::MODEL_STRING8
staticprotected

Simple model with two species. Both species are set by event assignments. The event is supposed to fire every three seconds from second 2. This is achieved by simulating the modulo function. This model is solely made of events.

Definition at line 44 of file test000063.h.

const char * test000063::MODEL_STRING9
staticprotected

Simple model with two species. This model represents an event endlessloop. There are three events, the first one triggers when time is greater 1 second and it modifies species_1. The second event is triggered if species_1 becomes larger than species_2 and it enlarges species_2. And the third triggers when species_2 becomes larger than species_1 and enlarger species_1.

Definition at line 45 of file test000063.h.

CCopasiDataModel * test000063::pCOPASIDATAMODEL = NULL
staticprotected

Definition at line 54 of file test000063.h.

Referenced by setUp(), and test_events_1().

The documentation for this class was generated from the following files:
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